Cucsat.G16939 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGGATTTAGATGAAGGAGAGAGAGATTAGATTCATTTTATTAAAGAGAAAATATGTAGATTCAAATTCTTAAGTAACATAAATACCAACACTTATGTTGAAATGATATGAGATTTTTGTGGTGAGTGTTGGATTGTTTTGTTGCTAAGCCAATTGGTAAATAGACTCAAGAAAGGAGTAAAGAAACAAGAAAATTCTTGAGCCTCTAATCTAAGAAGAAGAAAAACAAGTAAAGAAACAAGAAAATTCTTGAGCTAAATTTTGTGGCTTACAATTCAATTTCATTTCACAGGGGAAGCTTCAGACTTCAGAGCAATGAATTCAATTTCTGCTCACACCCATAACCCTTTTCGATCTGCTTCCCATTCAATTTTCCCCTCCTCTTTCACTTTCAACTTCCCTTCCCAGTTTCCCTCTCATCCGTTTCTCAATCCTATTTCTCCCAGTTGCATCCTCAATTCTGCAAGATTACGGACCTCTAATCCCCATGTTCGTCGCAATTTCAGGTCGTCTCAAGTTCTCAAGGCTTCCACTTCTTCTGGATATGTCCCAGAGATTGGGGAAATTCTCGGGGATGTTCGTATTTTCACTGCTGGTGGTGAGCCAGTTCTGTTCAAGGATCTTTGGGACCAGACTGAGGTAATCTAACAACCATTTCCTCTTCTGGGTTTGTCCGAATTTACTGATTGAAGTTCTTTTGCTGATTGATTCTGATAATGGGTTTGTGTTTTAATCTGCTTGATCATAATCTGAAAGCTGCAACTGTAGACTGCATAATGCTGAGACGAAGAAGAAGAAGAAATAATTAAGAATTGGACATGGAATTCCTTGGTATTATGCATAAATTATTGGTAATTTATTTGGTCTGAACTTTGATGTTTCTTTCCTTCCAAGTAATGGAAATAAAAAGGGACAGCTTAAGAATGATTCTAACTGAGTAGAGGTGACAGCTTCAGTGTGTAATGTTCCCTTCCTTTTACTTGAGATAGAAACCATGTAGCATATTGAAGAACAGAGCAAAAAGGAGGAAAATGCTGTTATGTTATAAATCTCAAATTTTGGCAGTTTTTGAAAACATTGGTTGAAACTAGATCATAAACCAAAAAGTTTACAGGTGTAATGAGGGTTTATAAGCAAAAAAAAAAAACCAAATGATTACTGAAAAGGGACCTTAGCTAACTGAAATTCCAATTCATAAGCAGTGAGTGTAGTGTATTTGAAAAACTCCACTGCAATGCTATCCTACCCTCTCAGGGACTATTTCATGGTAGAATTAACATCTGGATATATATGATTCATGAGTAACATATCTAGAGAGCTCAATAGTGTTACATTTACTGACTTATACAACTTGATACGTTATGTAACAAGTGGAGGCATCTATATCTCCATATTATAAGTTATAGATTCAAAGATGTGATATTTGATGATATTTGTTTGGTGTTTACGTAGGGAATGGCTGTTGTTGCACTTTTGAGACATTTTGGATGCTTTTGCTGGTAAGTCCTATCAATTTGGACCATTCATTTGCAGTTTTTTTTCCTTTGCAGGAAAAGAGGTTGAATATCTTTTTGTTTTGGTAATTTCATCTGTGTTATTTTTGTGACAGACAGCTACTTGTTCTTATTTCTAGTTGGGAACTTGCTTCCACTCTAAAAGAATCCAAAGAAAGATTTGATTCATCTGGTGTTAAATTAATAGCTGTAGGCATCGGTACTCCAAATAAAGCACGTATCCTAGCCGAGCGGGTATCAACTTTTAATTTTCCATGGCTGCATCATGTTTTTAACTCTTAGAAGACATCTCTTTATTAATAGTTATACTATGTAGCTTAGATGCTCTAAATCAAAATAAATCATAATACTATATTCCTGACTTCATTAAATTTGGATATTGTTATTTATTGTTTTAATGTTAATTTTGAAGAGATTCTAATTATGTAAACATGCATGACATTACATTTTAAAAAGTTTCTAATTATAAGTGATTTAACTTTTTAAGTTTGTATGTAATAAGTATTTAGTGTTAACTCTCCTTAGCATAATGATATATGACTTTTACAGTATTGATTTTGTTAACACAAATTGGTTAGATTTTTCTTCTAAAGAAAGAAGTAGGGATTAAATAACCACAACCCTAAAGTTTGTAGACTGAACTTATAATATTATCATCTCTCTTTTGGCTTCTTCTGTTCTGCTTTCATGGCATTAACATTGCTTCTTCATCCTTCAAATTCCAGTTGCCTTTTCCAATGGATTGCCTTTATGCTGATCCTGATAGAAAGGTAATACGAAGCTATAAATCTCCTTTCTATAGCATCATTACATTCGTTGTCGTTTTTCTTTGTTTTTTCAAGTTGAAGAACATAGGTGATATTGAACATTCAACCTATAAGATGATTATGATTTATGCAATCTCTGAAGTAACCTTGAGCAATGATCTAGACATAAAAACAATATGCCAAAGTGAATAATTTGAATTGTTCTCATCTATTTTGATATTTGCCTCTAATTCTTGTGAAATCTAATCAAAATATTGTTCTTACAGGCATATGATTTACTAGGTCTATACTATGGCTTTGGTCGTACATTCCTTAATCCAGCTAGTGTAAGAATTCTCCTTCCATGTACTTCATGTACTCCACATAAATTTTCTTTCCGTTTGAACTTTGTTTTACCCCCAATTGTCAAATGTTTCTAGGTCAAGGTGTTTTCAAAGACGAGATTGGACATCATGCGAGAAGCCATGAAAAACTATACTTTTGAGGCTACCCCGGACGATAAAAGCAGCGTGTTGCAGCAGGTCTTATTTGTGTTTTAATCACATGAAGAACACTAGCCTTTAGATCTTCTATTTGTTGAAACTTTCTTATTTCATGTTTGTCGTCATTAGGGAGGGATGTTTGTTTTCAAAGGCAAGCAACTGTTGTATGCTCGAAAAGACGAAGGTACTGGCGACCACGCTCCCTTAGATGATATCTACAACATCTGCTGTACTCAAGTCCCTGCAACCTGAAGCAATTGAACTGTTGTTGTATGCTCAAAAACGATGAAGGTATCAATGGCCACACTTCGACATCCATTGTTGAGTCATAGCATGAATCTTCACTCTTGGTTCTTAGATATTTTGATTGGTATGTGTCCCTTCTTATAGGGTGATTCAATGAAATACATAGTGATATTACAATTTATCTATGAATATGTTTTATGTTAAACATTTTCAATACTTTTTCAAAAATACTCTTTAGTTCAAATAGTAAACATAGATATTTTAGACCTTGCGTCTTTCATCAATGAAACATAATTATTCT ATGGATTGCCTTTATGCTGATCCTGATAGAAAGGCATATGATTTACTAGGTCTATACTATGGCTTTGGTCGTACATTCCTTAATCCAGCTAGTGTCAAGGTGTTTTCAAAGACGAGATTGGACATCATGCGAGAAGCCATGAAAAACTATACTTTTGAGGCTACCCCGGACGATAAAAGCAGCGTGTTGCAGCAGGGAGGGATGTTTGTTTTCAAAGGCAAGCAACTGTTGTATGCTCGAAAAGACGAAGGTACTGGCGACCACGCTCCCTTAGATGATATCTACAACATCTGCTGTACTCAAGTCCCTGCAACCTGA MDCLYADPDRKAYDLLGLYYGFGRTFLNPASVKVFSKTRLDIMREAMKNYTFEATPDDKSSVLQQGGMFVFKGKQLLYARKDEGTGDHAPLDDIYNICCTQVPAT Homology
BLAST of Cucsat.G16939 vs. NCBI nr
Match: XP_031736381.1 (prostamide/prostaglandin F synthase isoform X2 [Cucumis sativus]) HSP 1 Score: 223 bits (567), Expect = 2.00e-72 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Cucsat.G16939 vs. NCBI nr
Match: XP_004149685.1 (prostamide/prostaglandin F synthase isoform X1 [Cucumis sativus] >KGN61990.1 hypothetical protein Csa_006427 [Cucumis sativus]) HSP 1 Score: 223 bits (567), Expect = 4.55e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Cucsat.G16939 vs. NCBI nr
Match: XP_016902132.1 (PREDICTED: prostamide/prostaglandin F synthase isoform X2 [Cucumis melo]) HSP 1 Score: 212 bits (539), Expect = 1.23e-67 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Cucsat.G16939 vs. NCBI nr
Match: XP_008457741.1 (PREDICTED: prostamide/prostaglandin F synthase isoform X1 [Cucumis melo] >XP_016902130.1 PREDICTED: prostamide/prostaglandin F synthase isoform X1 [Cucumis melo] >XP_016902131.1 PREDICTED: prostamide/prostaglandin F synthase isoform X1 [Cucumis melo] >KAA0045765.1 prostamide/prostaglandin F synthase isoform X1 [Cucumis melo var. makuwa] >TYJ99517.1 prostamide/prostaglandin F synthase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 212 bits (539), Expect = 7.82e-67 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Cucsat.G16939 vs. NCBI nr
Match: XP_038902955.1 (prostamide/prostaglandin F synthase [Benincasa hispida]) HSP 1 Score: 199 bits (506), Expect = 6.39e-62 Identity = 94/104 (90.38%), Postives = 99/104 (95.19%), Query Frame = 0
BLAST of Cucsat.G16939 vs. ExPASy TrEMBL
Match: A0A0A0LJF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279270 PE=4 SV=1) HSP 1 Score: 223 bits (567), Expect = 2.20e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Cucsat.G16939 vs. ExPASy TrEMBL
Match: A0A1S4E1N0 (prostamide/prostaglandin F synthase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497363 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 5.94e-68 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Cucsat.G16939 vs. ExPASy TrEMBL
Match: A0A1S4E1M8 (prostamide/prostaglandin F synthase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497363 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 3.79e-67 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Cucsat.G16939 vs. ExPASy TrEMBL
Match: A0A5D3BK60 (Prostamide/prostaglandin F synthase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00840 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 3.79e-67 Identity = 101/105 (96.19%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Cucsat.G16939 vs. ExPASy TrEMBL
Match: A0A6J1ETX1 (prostamide/prostaglandin F synthase OS=Cucurbita moschata OX=3662 GN=LOC111436511 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 1.51e-58 Identity = 86/99 (86.87%), Postives = 92/99 (92.93%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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