Cucsat.G15341 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15341
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein CHROMATIN REMODELING 25
Location	ctg2009: 1521272 .. 1524999 (-)
RNA-Seq Expression	Cucsat.G15341
Synteny	Cucsat.G15341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATCAAAGTCCGGCTCCACACCATTATAAAGACGCCGCCGTTTGGCGCCAAATTCAGAAGATTTGAACAGATGCCGCTTGCTGCTCCGTCGCCGGCAATAACTTTCTTCGTTTTTGAGATTGTGAACCAACAATCTCACTTCCCGCTTTGTTAATCAAGCTGATTGAGGAGTCTTTTCCATGGAAGACGAAGATGAGATTGTCCCAGCCTCTGATTCTAGCGATTCAAGCGACGACTACATCGACATTAATGGTGAAGCCTTTCAGGATGAGGACGACGAAGAAGAACAATCCTCCAGTCTTTCCCCTTCATCTGACGAGGATCTAAAATCGAAGAACGTTGATGCCCTTTTGAGGTATGTATTTATGTTTAGCAACGCAATTCACGACTGAAGTAAAATAGTTTCCAACCGCAGCTTGTTAGTAGTCTAGGCCGCTTTTTTCCTTCTTCTCTTCCTTTCAACTGAAGATTGTTAGTTACTGCAAATGCTGACGATTCCTTAGAATTTTAAGTAAACTAAAGAATTGGACCTCGGATTAGGGAGGTGGAAATTTTCTTTACAGGGAGACTCTAATTGTACTAGATTGATTGTTTTGAAAAGAAGAGGAAGAGAAAAGAGCTTTGGAAACTGTCTGATTTTGCTTCTACGTGCTCATGGTGGTCGATCATGATATACCTAATGCTTATTTTCTTTGGATGCCGAAATACTGTCTTCTGAATTCTGAAATTTGGATAATTTTGAAATCGATAACTTGTTATTGCTATCTAGAATTTTCTTTCACTTGGATAGAGCAAGGTCCTTTTAGATCTGGCAGTGCTGCTCCTCTAATAATACTCGATATTTTTGGAAGTAGATGCAAATTTAAACTTCTTGGAAGTAGAGGAGCTTAAACATTTAAACATTCGAGGAGCTGCCACCACCATCACCATTTTGTACTTCTATTGACATGAAAATAACTAATTTAGTCTTGTGATCATATTCTAAATTTCTACCAGAGGTAACCTGGTTGTGAGAAGACAATCGTTGCTCCCAAGAGTTCTCTCAGTTGCAGAAGGTGCAGCAGTTTGTAGAAAACCTTTTAAACCTCCCTGCTCAAGTGGCTACGATGAAAGAAACAATCAGCTTGCACGTCGGCTGTGGGCACGGAAACGATTTGTTCCTTGGGGCTCTTTAAAACCAGCGTCATCTGTTATTGCCACTAATTTATTTCTCCCAAAAGCTGCTGAGAATGATGCAGTGGAGGAAAGTGTAACTCTACCACCTGGGATTGATCCTTTGGTGTTGTGGCAACCCGAAGACTCTGAGCTTAATGTCACGAATTTAGCATCAATAACAGTTGATCCATTGCTAGTTCGTTTCCTTCGCCCTCATCAGAGGTATCATTTCTGTTTTATTTTATGGCATATTTCAGCATTTTGTCCTAATAAATGCTGTAATAAATCAGTCTTACAACCAGAGCACACATGCAGGACAACAAGGTCCTTGAGTCCGTTTCATATTTAAAAAAAATGTTTTAGCAGTTTTATTGTAGAACTTAGATGTTGTCCTTTCTCATTTTAGTTTGATTTTTAATTAAGAAAGACAACCATAGCAGGAAAATATCACAAAAAGAAGTTGAATCTAAAAAAATTTGTTGGAAAAAGTATTGTGCAATTCGACTGGCAGTATTTGACGAGATGGACATATTTAATTTTTTTTGCAGAGAAGGTGTACAGTTCATGTTTGAATGTGTTTCCGGACTACATAAGGGGACAGACATATTTGGGTGCATTCTGGCGGATGATATGGGGTTAGTATTCCTCTCTCAAACATTTAAATGATCGAAACACCAATACACAAGGACTGTACTTATCTTTCAGTTTATTTCACTCATATCCTTAAAGTTGTTTTGGTGATTATCCTGCAGTTTAGGAAAAACATTGCAGTCGATCAGTTTGCTGTATACCCTTCTATGTCAAGGTTTTGATGGAAAGCCAATGGTTAAAAAGGCTATCATTGTTACACCTACTAGTCTCGTGAGTAATTGGGAGGCTGAAATTAAGAAGTGGGTTGGTGAAAGGGTTCACCTTATTGCTCTCTGTGAAAGTTCTAGAGAGGACGTTGTCTCTAGCATTGACAGCTTTGTACATCCCAAGAGTTCTTTACAGGTATATTTGTGTGCTTATTCTGGTAATATCTACAAACAACTGTTTCAGTTGGACACATTAAAGTGAATTACAATTCATACATTCATAGGTGCTGATTATTTCATATGAGACATTCCGTATGCATTCATCAAAGTTCAGCCAAAGTGAATCATGTGATTTACTCATATGCGATGAGGCTCACCGACTGAAGAATGATCAGACATTGACAAATCGGGTATAACGTGTGGGCTTTAATTTTCCATTTCAATTCTTTTTCATATGGAATTATTTCTATATCTCCTCTTCAGGCACTGGCTGCCCTGTCTTGCAGGCGTAGGGTTTTGTTATCAGGAACTCCAATGCAGGTATTTTTATTTTCCTTTTCATAAGAATTAAAAACCAACTTCCTAACGTGGAAAATACTCACGTGCCTCCAATTTTTTAAAATTCTCAACTTCATGCACTGTTCTACCTTTAAGGTTTCAAGCTTCTATATCATTTTTGTAATACGGCCCTTCACTCATACTCCTACAGAATGACCTAGAAGAGTTCTTTGCCATGGTTAACTTTACCAATCCAGGAATTTTGGGTGATGTTTCACATTTCCGTCGATATTATGAGGTGAGCTCTTCTTATTTTTATCTATTAATTTTCTTGTTTTAGTGGGGTGGAATTTGAGGGTCAAGCAATGTGATAAGTGGATGCAGACTCTGTGGCTTTTCAATTTTTGTGAGTTTGTACTTGCATGCGAGTGTGAAAAGAAGCATAAACCAGCCAATCAAGTGCATGCACTTGTTTCAACAGGACATTTGTGAACTTTAAGGATGACAAATGTGAAAAATTCCTTCAAGGAGAAAAGCCAAGGTTTTCTAGGCCATATATGAGCCCAATGTTGGAATATTGTCTTGTAATGAAGGCGTTCTGTTAGGTACTTAAGTAACTTGGAGAACCATACCCCAAAAGCCAACTATTGGAGTGGGAGAGAGCTAAGCACCTTGGAGAACCATACCCCAAAATTCAACTATTGGAGTGGGAGAGAGCCAAGCCAGTTAAGTACCACATTGGTCATCCCATTCAATGTGGGACAAAAGCATTCCATACCTACCTTGGTTCCTAACAATACCCCATATTCTTGGAAAGCCGCAAGATTTCACTCAACTACACTCGGTTAGAACCCTCTGTCTGTTCCACTCTGAAACGTCGACAACGGACTCTAATACCTTTGTTAGGTACTTAAGTACCTTGGAGAACCACACCCCAAAAGCCAGCTATTGGAGTGGGAAAGCCAAGCCACTTAAGTACCACATTGGCCATCCCATTCTTACCAATGTGGGGAAAAACCATCTCATAACAACCTTGGTTCCTACCATGTTCTTGATGTTTACCCTATTTCAGAAGTTGATAATTTTCTGTGGTAAGACTAAAGACTTAACACCATCTTTGTGAAGGCACCAATTATTTGTGGGAGGGAACCTATTGCTACCGAGGAAGAGAAAAAGCTAGGTGCTCAACGCTCGACTGAACTAAGTGAAAAGGTTAATCAGGTAATCTCCTTTGTTAGATGAGCCATCCAATAATATAACATTTAGATATAAACATACTTTTTTCTCTTAACTTTTTGGACATTATTTGTGGACTTGATCACATCCCAAAATATGCTTGGCAGTTTATCCTACGGAGGACTAATGCACTCTTATCAAATCACTTGCCACCAAAGGTATGGTATAATGTGTTCCATAACCAAGGTGAATCTTGGTATTGCTTATTTATATTTTATTTTTAATTTAACAACTTTGATTCATCTGAACAATTTTTATACAGCTGATTGGCCTAAAGTTTATTGTGTTTCACAAAAAATATGAAACACTCACTACACAAGCTTGTTTTTGATTTTTTTTTTTTCTTTTACCTTTTAGAGAGATCCTGTGTATTAACCGTTCACTAGTTAAAATGAACATGTTTATGAAAGTTTAACTACTTATCAGGTGTTTGTGAAGTTAAGCAACCAATTAGACACAAAATTGAAAGTCTAGGAACCTTTTTGATACATACTTAAAAAACCATGGACTAAGACTTGTAACATTTTCTAATCCTTTTTGTTTTGATTTTCTTGTCACCCTTATTTGTATCTCCTTCTTTCATTGATGAAAGTATCGGTTTCTTTTTCGAAAACAAGGGATGCTATGGTTCCACGATTTGATGATATAAAAGCTGTTTTAGTTTGTTTGGAAAGGAGAAAAGATTTCTCGATGAAACTAGAGATTAGGGAAAAGTTCAGGGCAATATTAATTTTGGTGTCTCCTTTGTTTGAAAATTTTTGTGACCATTCTTCCTTTTGATTACTTCGAAATGCCAATTGAATTTTTGTTTCTTACTAGATAAATTTACTTTCATTAGATAAACCAAAAGTTCTGTATTATGTAAGCTTCTACTTTTTTCTGCAGATAGTTGAAGTCATTTGCTGCAAGTTGAGTCCTCTTCAAGCAGACCTATATAATCATTTTGTACAGTCAAAAAATGTTAGCTCGCTGCCTGTGTAGTTTATTCCTATATCGATGTAATTATTCATTCCAGTTGTCTAACCAAACCAGGCTTATATCTTGTGGCCTCAATATAGGTTAAGCGGGCAATTACTGAAGAGCTAAAGCAAGCTAAGATTTTGGCCTACATAACTGCACTTAAGAAGCTTTGCAATCATCCAAAGGTATGGTTTACTCGAGTTTCTAAGAGAGATCTATTTTATCTAAATCTTGTACACGGTAGATCTTCTTTGTTATTGGTTAATTAGATGATAATCCAGATCATTTCTCTTAGACTTTCAACTTTTTCACCCTAAAAATTTAAACATACAGACTGTCTTTGGTTTCTTTTCATACTATACGTTATTTACATAGATATGTTTTGGAATGAGAGTATCCTATACAATCTCCTCTCTTCAGCTTCTTTTTTATGTCGTTATAAATGAAAAATAACTATCAACCTAAGTGGAAGATCTCTTCTTGTAGCTTATATACGATACTATAAAAAGTGGGAGTCCAGGAACTTCAGGATTAGAGAGCTGTATTCGGTTTTTCCCTCCAGAGATGTTCTCTGGAAGGTAAGCTATGTTTCATTATCTCTCTGTCTGTCTCTCTCCTATGCATACAAACATCTGCAACTGGTGACTTAGGTTTGGAATTGTTATCACTGTCTGAGTAGTTTCTAATTTTGTTAGGTCTGGTGCATGGACTGGTGGAGATGGGGCTTGGGTTGAATTATCAGGGAAAATGCATGTCCTAGCTAGGTTACTAGCCCACTTACGCCAGAGAACTGATGACCGTATCGTTCTTGTCTCAAACTACACTCAAGTAATTTTCAGTTCCTTTGCTGACCTATTGAGGATAATAACAATTCCACCCTCCCTTCCCTGTCTCTGCTAAAGTACTCCTCTCACAGAACATTGTTTAATTGTATATGGTATTCACAAAACCAGTTTAATTAATCTTTTAATTGCTCAACGTGTCATATATTCACTTTGGTTTGCAACTGAACCAGATTAAGTTTCTGCCTTGATGAAGTATAGCTATTTTCTGCTCTATACCCAAGATGAAACTTTTTGGTGTTTTGTAGTCTTTAATGTGTTATTTTGCGGTAATTAAATTATCTTCCCATCAATAAAACTAAACTCCTTTAATTAAATTATCTTCCCATCAATAAAACTAAATTCCTTTCTTAGGGGACTAATGTAACTTTCATGTATTAGACGCTAGATTTGTTTGCTCAACTGTGTCGTGAAAGGAGGTACCCGTATTTAAGGCTTGATGGAACCACATCAATAAGTAAAAGACAAAAGTTAGTCAACCGTTTTAATGATCTGTCAAAGGTATGCAGCCTTTATAAGATTCGATTTGGTTTTATTTTTCTATTCCTTTAGTGCAATCTGGACGTATAAATTGCTTCCTGCTTATTAGACTTTCAAGGAAGTCTATGTGGGGATAATATAGTGCTAAAGCACCGTTTTATCAATACTTCGCAGGATGAGTTTGTTTTTCTATTGAGCAGCAAGGCTGGTGGATGTGGTCTGAATTTGATTGGTGGAAATCGTTTAGTTCTGTTTGATCCTGACTGGAACCCTGCGAATGATAAGCAAGTAAACCTACCGCTGTGTGGAACCCCTGGTTTGGACTCATTGAATTCTAGAATATGAATATGCAGTCTGCCTTCTGATGTTTTCCTTGTTTTCATCTGTCTTACCATACGTGAATAGGCTGCTGCAAGAGTGTGGAGGGACGGACAAAAGAAGAGAGTATTCATCTACAGATTTTTAAGTACCGGAACGATTGAAGAAAAGGTTTGAACTCATTGTAAATAAGGCTAAAATAATCACCCTCTTCACGTTCATGTTTTTATGATATATATATATGTTGTCAATATAGTTAGAATTCTTTTCTCATATATCCTAGTGTTATATAGGTGTACCAGCGACAAATGTCAAAAGAAGGGTTACAAAAAGTTATTCAGCAGGAGTCAACAAATAACCTTACGACCCAGGTTTAAAATTGCTTACTTTTCGATATTGATTTGGAAATACTTAGCAACATTAAATCAAACTTGGAATCTAGAAAGGTTATTTGAAGGTCCCTTTTCTCCCTTCATTTTTCAGGTGAACTTCCTTTCATCTGAGGATTTACGCGATTTATTCTCATTTCATGATAACGTCAGGTAAAACACTTGCTATGATTTATTTGCTCAAGATGTGTGACATTATCTTACAATTTTTTTAATAAAAGTCAGAAATAGTATATTATGCATTTTACATAGGAAGCCTGTATTTCATGGCGAATCGTGCAACCTATTTCACTAGGATAGAGTGGAGGAAGTTAATTCATATAAATACTGTGTACAAGAAATAAAAATTTTAGGCCATTTGATAATAATGTCCTTTTTAGTTATGTTCTTGAAAATTAGGTGGTCTTCTTCTCAACTTTTTTTCAATAGTTTTTCATCTCTAGAAAGAAACATTTGGATTATTAGCCACACTTAAAAAATAAGAACAAAAATTTAAAAGTTAAAGCTTATAATCACTCTCACATATATAATTGGTTTTCATAACCATCCTGGCTTGGCGTAGTGCTAAATAAAGAAGACATAGTCTCAATAACTAAGAGGTCGTGGATTTAATTTATACTGGCCACCTACATAGGAATTAATTTCTTTCGAGTTATGTTGACACCCAAATGCTATAGGGTCAGATGGGTGGCCGTAATACTCACGATATAGTATATATATATAATTGTTTGTCTTTTGTCTTTTGTTTTTTAAAATTAAGCCTACAAACTTTTATCTATAACTTTCTTGCCTTGTTACCTACTTTTAAAAATTGTTTTAGAAAACCAAATTAAATTTTAGAAACTAAAAAACAGTAGTTTAAACTTGACTTTGTTCTTGAAGTCTTAGAATTTAAATGTGTTTTTAAGGAGTGTGAAAAACTTAACTAACAAATGATGAGGACACAATCGTACATTTCAAAAATACAAACTAAAAACAACAATAGTTATCAATGGGAGCTTTGTTTTTCAAAAACTTAATTTTGTTTTTAGAATTTTACTAAGAACTCAAACCTTTAAAAAGGAGAAAAATCATAATAACAGAATTGGAAAAACAAATTCAAAAATAGAAAACTAAAAGCAAAATAGCTATTGAAGTCTACCTTTTAAGTTTTTACTTGACTTGGATTTTGAAAGAACTATTATAAAGTTGGAAAAGAAATCATCTATCGTAGGTTGATTTTGAAAAACCAAATACTTAGACCTAATTAATGAGGTGCAAGCATACTTTTTTTTTTCTAGGGTTAAGTAGCCACCAGTCTCTGACCGTTGATCAAACAGCTTGTCCTGTGATCTAAAAAAGGATTGTTTTGGTTTCCTATGCCTGACTTTTTTTTTCTTTCGCTACTTATTTATTTATATATATATATATTTTTTTTAAGTGTTGGGTATATTTTCTCAATTTAACTGTAAGTTAACAAATCCAATGTTGTTTTCCTTTACCTGAGACATCAACAAACTAAGATCTTTATTTAACAAACCCCATAAAAGTTCCTTTCTTCCCCTAATACACGAATTAGAAATTTATCACCCACAAAAACAAACAAATCAAAGGACATAAATTTTTGCAAACATAACCGGGATTTACAAATATAACAGCATGAAGAAGTTTGTCATTTTGAATACACAGGTCTGAAATCCATGAAAAGATGAATTGCAGTCGGTGCCAAAATTGTTATGGTAGGCCCGAGGACATGGACGAAAACCTGTCTACAAACGGACCTTGTCAGTCTGACCAAGTAACTTCTGACATTGGCGGATTTGCACAACTTGCTGGATGCTTAGACAAGTTAAAGAAATCAGAGCAACAGGTTGGTCACTTCTACAATTAACGGGAGGATAGAATTTCTTCTAGTTGCCTTATTTATCCACATATGCTCTTCAAAATTTTCAGGTGGGGTCTCCGCTAGAAGAAGATTTAGGCAACTGGGGGCATCATTTTGACTCTACTACCGTACCTGATACCATTTTACAAGCTTCTGCTGGTGATGAGGTTTGATCTTTAATTCTTTCATATATTGTTAAATGGCTAAATTATAGAAAATGCCTTTGAACTTTGTATTTTGGGTAATACCCCTAAATTTTCAAAGTCTCGACAGCACCCTTCGATTTTAAAAAACAATTAATCTTGTATTTTGTTTCAAAAATACCGTCGGTATTTAAACGACAATCTTTTTGACACAATACAAAATTTTAATTTTTTGTTTTGCTTTAAAAAAAATCCTTACACTTTCAAAAATTGGATAAAAACTTATAAATTTTTCGTTTAAAAAATGTCCTTTCAACTTTCACAAGTTGCATTAATAACAATTTATTTGAAGCTAACATGAGTTTGAAAACGATCCATTGTAAAACAATTTTCTTTCCACATAGATACTCGTATCTTTTTTCCATTTGTCCAATTTGTTCAGCAAAAATGTATAAACCAAAATTTTAAGCAGCATAAATTTCTATAAAATCTCACAAATTCTCAAAATTAAAATTCTCCTTAAAAACTCATCAAAACTATAAATACACAAATACAAAAAGGATAGTATTTGGTTATTAAAACCCTCAACTAATAACGTACAACCAATCTACTGTTCCTGAGTGGTTTCATATCTTTCTTCTAGTTATAATCTATATGCTTTAATCAAATGGTTTATTTATTTATATTTATTTTAAAAATAAAGAATCACTTTCTGTTATCTCATGATTTACTTGTGTTTGTTTCAGGTTACCTTTGTTTTCTCAAATCAAGTTGATGGAAAGCTTGTACCCGTCGAATCGATGAGTAGTCCGAGGATGAAAGATGCAGAGGGAAATGGGAACAACTCCAGATTGAACCAAAACTCAAGACAGAAACCATTTTTACTATCTCAACATAGAAAACCTTTACAATCCATTACTTCTAATGAAGATCCCAACAAAGGTACATTAAAATTTACATCCACTGTCTTTCAAAGCGAAACCATGAAGCCTGTTAGAACTTCAGTTGAAGGTTCAATGCATGTAACATTGAAGCACAAACACTCTCTTGGAAATTACTTACCACAGAAAAGAATGTCTGATGTTTCGGAATGTGATGATTTCGAGTAAAGTTTAAACGTCAATTAATAGCTAATGATGGTAACTGTGGGAGGTTGGTTGATTTGATCTTGCATATTTCAGTTACTTGAGATTTCTGATCTGATGTTTTGTTAGGCACATTGATGGTAAAATGAATATTATAAACTGAAATATTTTTTAAGATTATTGTAATGATAAAAGAGTTGAGATTTTGACTTCATGGAGACATTATAAGATGACCAA

Coding sequence (CDS)

ATGGAAGACGAAGATGAGATTGTCCCAGCCTCTGATTCTAGCGATTCAAGCGACGACTACATCGACATTAATGGTGAAGCCTTTCAGGATGAGGACGACGAAGAAGAACAATCCTCCAGTCTTTCCCCTTCATCTGACGAGGATCTAAAATCGAAGAACGTTGATGCCCTTTTGAGAGGTAACCTGGTTGTGAGAAGACAATCGTTGCTCCCAAGAGTTCTCTCAGTTGCAGAAGGTGCAGCAGTTTGTAGAAAACCTTTTAAACCTCCCTGCTCAAGTGGCTACGATGAAAGAAACAATCAGCTTGCACGTCGGCTGTGGGCACGGAAACGATTTGTTCCTTGGGGCTCTTTAAAACCAGCGTCATCTGTTATTGCCACTAATTTATTTCTCCCAAAAGCTGCTGAGAATGATGCAGTGGAGGAAAGTGTAACTCTACCACCTGGGATTGATCCTTTGGTGTTGTGGCAACCCGAAGACTCTGAGCTTAATGTCACGAATTTAGCATCAATAACAGTTGATCCATTGCTAGTTCGTTTCCTTCGCCCTCATCAGAGAGAAGGTGTACAGTTCATGTTTGAATGTGTTTCCGGACTACATAAGGGGACAGACATATTTGGGTGCATTCTGGCGGATGATATGGGTTTAGGAAAAACATTGCAGTCGATCAGTTTGCTGTATACCCTTCTATGTCAAGGTTTTGATGGAAAGCCAATGGTTAAAAAGGCTATCATTGTTACACCTACTAGTCTCGTGAGTAATTGGGAGGCTGAAATTAAGAAGTGGGTTGGTGAAAGGGTTCACCTTATTGCTCTCTGTGAAAGTTCTAGAGAGGACGTTGTCTCTAGCATTGACAGCTTTGTACATCCCAAGAGTTCTTTACAGGTGCTGATTATTTCATATGAGACATTCCGTATGCATTCATCAAAGTTCAGCCAAAGTGAATCATGTGATTTACTCATATGCGATGAGGCTCACCGACTGAAGAATGATCAGACATTGACAAATCGGGCACTGGCTGCCCTGTCTTGCAGGCGTAGGGTTTTGTTATCAGGAACTCCAATGCAGAATGACCTAGAAGAGTTCTTTGCCATGGTTAACTTTACCAATCCAGGAATTTTGGGTGATGTTTCACATTTCCGTCGATATTATGAGGCACCAATTATTTGTGGGAGGGAACCTATTGCTACCGAGGAAGAGAAAAAGCTAGGTGCTCAACGCTCGACTGAACTAAGTGAAAAGGTTAATCAGTTTATCCTACGGAGGACTAATGCACTCTTATCAAATCACTTGCCACCAAAGATAGTTGAAGTCATTTGCTGCAAGTTGAGTCCTCTTCAAGCAGACCTATATAATCATTTTGTACAGTCAAAAAATGTTAAGCGGGCAATTACTGAAGAGCTAAAGCAAGCTAAGATTTTGGCCTACATAACTGCACTTAAGAAGCTTTGCAATCATCCAAAGCTTATATACGATACTATAAAAAGTGGGAGTCCAGGAACTTCAGGATTAGAGAGCTGTATTCGGTTTTTCCCTCCAGAGATGTTCTCTGGAAGGTCTGGTGCATGGACTGGTGGAGATGGGGCTTGGGTTGAATTATCAGGGAAAATGCATGTCCTAGCTAGGTTACTAGCCCACTTACGCCAGAGAACTGATGACCGTATCGTTCTTGTCTCAAACTACACTCAAACGCTAGATTTGTTTGCTCAACTGTGTCGTGAAAGGAGGTACCCGTATTTAAGGCTTGATGGAACCACATCAATAAGTAAAAGACAAAAGTTAGTCAACCGTTTTAATGATCTGTCAAAGGATGAGTTTGTTTTTCTATTGAGCAGCAAGGCTGGTGGATGTGGTCTGAATTTGATTGGTGGAAATCGTTTAGTTCTGTTTGATCCTGACTGGAACCCTGCGAATGATAAGCAAGCTGCTGCAAGAGTGTGGAGGGACGGACAAAAGAAGAGAGTATTCATCTACAGATTTTTAAGTACCGGAACGATTGAAGAAAAGGTGTACCAGCGACAAATGTCAAAAGAAGGGTTACAAAAAGTTATTCAGCAGGAGTCAACAAATAACCTTACGACCCAGGTGAACTTCCTTTCATCTGAGGATTTACGCGATTTATTCTCATTTCATGATAACGTCAGGTCTGAAATCCATGAAAAGATGAATTGCAGTCGGTGCCAAAATTGTTATGGTAGGCCCGAGGACATGGACGAAAACCTGTCTACAAACGGACCTTGTCAGTCTGACCAAGTAACTTCTGACATTGGCGGATTTGCACAACTTGCTGGATGCTTAGACAAGTTAAAGAAATCAGAGCAACAGGTGGGGTCTCCGCTAGAAGAAGATTTAGGCAACTGGGGGCATCATTTTGACTCTACTACCGTACCTGATACCATTTTACAAGCTTCTGCTGGTGATGAGGTTACCTTTGTTTTCTCAAATCAAGTTGATGGAAAGCTTGTACCCGTCGAATCGATGAGTAGTCCGAGGATGAAAGATGCAGAGGGAAATGGGAACAACTCCAGATTGAACCAAAACTCAAGACAGAAACCATTTTTACTATCTCAACATAGAAAACCTTTACAATCCATTACTTCTAATGAAGATCCCAACAAAGGTACATTAAAATTTACATCCACTGTCTTTCAAAGCGAAACCATGAAGCCTGTTAGAACTTCAGTTGAAGGTTCAATGCATGTAACATTGAAGCACAAACACTCTCTTGGAAATTACTTACCACAGAAAAGAATGTCTGATGTTTCGGAATGTGATGATTTCGAGTAA

Protein sequence

MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALLRGNLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCSSGYDERNNQLARRLWARKRFVPWGSLKPASSVIATNLFLPKAAENDAVEESVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQSKNVKRAITEELKQAKILAYITALKKLCNHPKLIYDTIKSGSPGTSGLESCIRFFPPEMFSGRSGAWTGGDGAWVELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRPEDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDDFE

Homology

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BLAST of Cucsat.G15341 vs. ExPASy Swiss-Prot
Match: Q0PCS3 (Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana OX=3702 GN=CHR25 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.2e-57
Identity = 121/198 (61.11%), Postives = 147/198 (74.24%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQ E T+N T Q N LS+EDLRDLFSFH +VRSEIHEKM+CSRCQN     
Sbjct: 674 MSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQNDASGT 733

Query: 61  EDMDENLSTN---GPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHF 120
           E+++E    N     CQ DQ   DIGGFA+ AGC + LK SE+QVG+PLEEDLG+WGHHF
Sbjct: 734 ENIEEGNENNVDDNACQIDQ--EDIGGFAKDAGCFNLLKNSERQVGTPLEEDLGSWGHHF 793

Query: 121 DSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQK 180
            S +VPD ILQASAGDEVTFVF+NQVDGKLVP+ES  SP+  ++E +  N  +N+ +  K
Sbjct: 794 TSKSVPDAILQASAGDEVTFVFTNQVDGKLVPIESNVSPKTVESEEHNRNQPVNKRAFNK 853

Query: 181 PFLLSQHRKPLQSITSNE 196
           P    + R+PLQ ++ NE
Sbjct: 854 P--QQRPREPLQPLSLNE 867

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BLAST of Cucsat.G15341 vs. ExPASy Swiss-Prot
Match: A4PBL4 (DNA repair and recombination protein RAD54 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD54 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.6e-42
Identity = 89/158 (56.33%), Postives = 113/158 (71.52%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRC--QNCYG 60
           MSKEGLQKVIQQE  +    Q + LS+EDLRDLF+FH+ +RSEIHE + C+RC    C  
Sbjct: 729 MSKEGLQKVIQQEQADG-KMQGSSLSTEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCMV 788

Query: 61  RPEDMDENLSTNGPCQSDQVTS--DIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHH 120
                 ++ +T     +    S  DIGGF  ++GC+ K+  S QQ+GSP EEDLG+WGHH
Sbjct: 789 LDGSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHH 848

Query: 121 FDSTTVPDTILQASAGDEVTFVFSNQVDGKLVPVESMS 155
            D +TVPDTILQ S+GDEV+FVF+NQ+DGKLVPVESM+
Sbjct: 849 SDPSTVPDTILQCSSGDEVSFVFTNQIDGKLVPVESMA 885

[Close]

BLAST of Cucsat.G15341 vs. ExPASy Swiss-Prot
Match: B3MMA5 (DNA repair and recombination protein RAD54-like OS=Drosophila ananassae OX=7217 GN=okr PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 47/183 (25.68%), Postives = 74/183 (40.44%), Query Frame = 0


Query: 16  NNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRPEDMDENLSTNGPCQS 75
           NN +++ +F + +DL+DLFSF   + S+ HEK+ C RC           +N+ T  P +S
Sbjct: 654 NNESSEKHF-TRDDLKDLFSFDQKILSDTHEKLKCKRCV----------QNIQTKPPSES 713

Query: 76  DQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDSTTVPDTILQASAGDE- 135
              TS                             L  W H  ++  +PD+IL  +  D  
Sbjct: 714 TDCTS----------------------------HLSQWYHCSNNRGLPDSILAQAWTDSK 773

Query: 136 -VTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSITS 195
            V+FVF ++   K    E + SP    AE            R++P        PL   ++
Sbjct: 774 CVSFVFHHRSQAK----EVVESPESAAAEAESVEEESQPTQRKRP------SPPLSDDSA 787

Query: 196 NED 197
           +ED
Sbjct: 834 DED 787

[Close]

BLAST of Cucsat.G15341 vs. NCBI nr
Match: KGN57560.2 (hypothetical protein Csa_010402 [Cucumis sativus])

HSP 1 Score: 514 bits (1325), Expect = 1.62e-174
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP
Sbjct: 673 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 732

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST
Sbjct: 733 EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 792

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL
Sbjct: 793 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 852

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 853 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 912

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSECDDFE
Sbjct: 913 QKRMSDVSECDDFE 926

[Close]

BLAST of Cucsat.G15341 vs. NCBI nr
Match: XP_031737571.1 (protein CHROMATIN REMODELING 25 [Cucumis sativus])

HSP 1 Score: 514 bits (1325), Expect = 1.76e-174
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP
Sbjct: 676 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 735

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST
Sbjct: 736 EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 795

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL
Sbjct: 796 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 855

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 856 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 915

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSECDDFE
Sbjct: 916 QKRMSDVSECDDFE 929

[Close]

BLAST of Cucsat.G15341 vs. NCBI nr
Match: XP_008456127.1 (PREDICTED: protein CHROMATIN REMODELING 25 isoform X1 [Cucumis melo] >KAA0037102.1 protein CHROMATIN REMODELING 25 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 490 bits (1261), Expect = 7.00e-165
Identity = 240/254 (94.49%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNC+RCQNCYGRP
Sbjct: 675 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCNRCQNCYGRP 734

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDE+LSTNG CQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDL NWGHHFDST
Sbjct: 735 EDMDEDLSTNGACQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLANWGHHFDST 794

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTF+FSNQVDGKLVPVESM+SPR+K+AEGNGNNS LNQN+RQKPFL
Sbjct: 795 TVPDTILQASAGDEVTFIFSNQVDGKLVPVESMTSPRVKEAEGNGNNSGLNQNTRQKPFL 854

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQS+TSNEDPNKGTLKFTS VFQ ETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 855 LSQHRKPLQSVTSNEDPNKGTLKFTSNVFQRETMKPVRTSVEGSMHVTLKHKHSLGNYLP 914

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSEC DFE
Sbjct: 915 QKRMSDVSECVDFE 928

[Close]

BLAST of Cucsat.G15341 vs. NCBI nr
Match: XP_038878248.1 (protein CHROMATIN REMODELING 25 [Benincasa hispida])

HSP 1 Score: 469 bits (1206), Expect = 1.23e-156
Identity = 232/254 (91.34%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQEST+NLTTQVNFLSSEDLRDLFSFHDN+RSEIHEKMNCSRCQNC GRP
Sbjct: 675 MSKEGLQKVIQQESTDNLTTQVNFLSSEDLRDLFSFHDNIRSEIHEKMNCSRCQNCCGRP 734

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDE+LST GPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDL NWGHHFDS 
Sbjct: 735 EDMDEDLSTTGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLANWGHHFDSA 794

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTFVFSNQVDGKLVPVESM+SPRMK+AEGNGNNS+L QNSRQK  L
Sbjct: 795 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMTSPRMKEAEGNGNNSKLKQNSRQKLLL 854

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           +SQHRKPLQSITSNED NKG L FTS VFQ ETMKPVR SVEGSMHVTLKHKH LGNYLP
Sbjct: 855 VSQHRKPLQSITSNEDLNKGPLTFTSNVFQRETMKPVRNSVEGSMHVTLKHKHYLGNYLP 914

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSEC+DFE
Sbjct: 915 QKRMSDVSECEDFE 928

[Close]

BLAST of Cucsat.G15341 vs. NCBI nr
Match: TYK13976.1 (protein CHROMATIN REMODELING 25 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 439 bits (1129), Expect = 1.22e-144
Identity = 223/254 (87.80%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVR                  P
Sbjct: 738 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVR------------------P 797

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDE+LSTNG CQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDL NWGHHFDST
Sbjct: 798 EDMDEDLSTNGACQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLANWGHHFDST 857

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTF+FSNQVDGKLVPVESM+SPR+K+AEGNGNNS LNQN+RQKPFL
Sbjct: 858 TVPDTILQASAGDEVTFIFSNQVDGKLVPVESMTSPRVKEAEGNGNNSGLNQNTRQKPFL 917

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQS+TSNEDPNKGTLKFTS VFQ ETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 918 LSQHRKPLQSVTSNEDPNKGTLKFTSNVFQRETMKPVRTSVEGSMHVTLKHKHSLGNYLP 973

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSEC DFE
Sbjct: 978 QKRMSDVSECVDFE 973

[Close]

BLAST of Cucsat.G15341 vs. ExPASy TrEMBL
Match: A0A0A0L9A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207350 PE=4 SV=1)

HSP 1 Score: 514 bits (1325), Expect = 8.30e-175
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP
Sbjct: 675 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 734

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST
Sbjct: 735 EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 794

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL
Sbjct: 795 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 854

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 855 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 914

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSECDDFE
Sbjct: 915 QKRMSDVSECDDFE 928

[Close]

BLAST of Cucsat.G15341 vs. ExPASy TrEMBL
Match: A0A5A7T0X6 (Protein CHROMATIN REMODELING 25 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G00030 PE=4 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 3.39e-165
Identity = 240/254 (94.49%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNC+RCQNCYGRP
Sbjct: 675 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCNRCQNCYGRP 734

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDE+LSTNG CQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDL NWGHHFDST
Sbjct: 735 EDMDEDLSTNGACQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLANWGHHFDST 794

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTF+FSNQVDGKLVPVESM+SPR+K+AEGNGNNS LNQN+RQKPFL
Sbjct: 795 TVPDTILQASAGDEVTFIFSNQVDGKLVPVESMTSPRVKEAEGNGNNSGLNQNTRQKPFL 854

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQS+TSNEDPNKGTLKFTS VFQ ETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 855 LSQHRKPLQSVTSNEDPNKGTLKFTSNVFQRETMKPVRTSVEGSMHVTLKHKHSLGNYLP 914

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSEC DFE
Sbjct: 915 QKRMSDVSECVDFE 928

[Close]

BLAST of Cucsat.G15341 vs. ExPASy TrEMBL
Match: A0A1S3C3S4 (protein CHROMATIN REMODELING 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496159 PE=4 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 3.39e-165
Identity = 240/254 (94.49%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNC+RCQNCYGRP
Sbjct: 675 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCNRCQNCYGRP 734

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDE+LSTNG CQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDL NWGHHFDST
Sbjct: 735 EDMDEDLSTNGACQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLANWGHHFDST 794

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTF+FSNQVDGKLVPVESM+SPR+K+AEGNGNNS LNQN+RQKPFL
Sbjct: 795 TVPDTILQASAGDEVTFIFSNQVDGKLVPVESMTSPRVKEAEGNGNNSGLNQNTRQKPFL 854

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQS+TSNEDPNKGTLKFTS VFQ ETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 855 LSQHRKPLQSVTSNEDPNKGTLKFTSNVFQRETMKPVRTSVEGSMHVTLKHKHSLGNYLP 914

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSEC DFE
Sbjct: 915 QKRMSDVSECVDFE 928

[Close]

BLAST of Cucsat.G15341 vs. ExPASy TrEMBL
Match: A0A5D3CU99 (Protein CHROMATIN REMODELING 25 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001800 PE=4 SV=1)

HSP 1 Score: 439 bits (1129), Expect = 5.93e-145
Identity = 223/254 (87.80%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVR                  P
Sbjct: 738 MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVR------------------P 797

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           EDMDE+LSTNG CQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDL NWGHHFDST
Sbjct: 798 EDMDEDLSTNGACQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLANWGHHFDST 857

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTF+FSNQVDGKLVPVESM+SPR+K+AEGNGNNS LNQN+RQKPFL
Sbjct: 858 TVPDTILQASAGDEVTFIFSNQVDGKLVPVESMTSPRVKEAEGNGNNSGLNQNTRQKPFL 917

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           LSQHRKPLQS+TSNEDPNKGTLKFTS VFQ ETMKPVRTSVEGSMHVTLKHKHSLGNYLP
Sbjct: 918 LSQHRKPLQSVTSNEDPNKGTLKFTSNVFQRETMKPVRTSVEGSMHVTLKHKHSLGNYLP 973

Query: 241 QKRMSDVSECDDFE 254
           QKRMSDVSEC DFE
Sbjct: 978 QKRMSDVSECVDFE 973

[Close]

BLAST of Cucsat.G15341 vs. ExPASy TrEMBL
Match: A0A6J1IUV2 (protein CHROMATIN REMODELING 25 OS=Cucurbita maxima OX=3661 GN=LOC111478773 PE=4 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 5.32e-143
Identity = 217/254 (85.43%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCYGRP 60
           MSKEGLQKVIQQE T+NLT Q NFLSSEDLRDLFSFH +VRSEIHEKMNC+RCQNC GRP
Sbjct: 679 MSKEGLQKVIQQELTDNLTAQANFLSSEDLRDLFSFHGDVRSEIHEKMNCTRCQNCNGRP 738

Query: 61  EDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHHFDST 120
           E+MDE  ST+  CQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDL NWGHHF+ST
Sbjct: 739 EEMDEGPSTSRTCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLANWGHHFNST 798

Query: 121 TVPDTILQASAGDEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFL 180
           TVPDTILQASAGDEVTFVFSNQ+DGKLVPVES +SPRMK+AEGN  NS+LNQNS+QK  L
Sbjct: 799 TVPDTILQASAGDEVTFVFSNQIDGKLVPVESKTSPRMKEAEGNEKNSKLNQNSKQKLLL 858

Query: 181 LSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLP 240
           +SQHRKPLQSITSNED NKGTL FTS VFQ ETMKPVRTS+EGSMHVTL  KHSLGNYLP
Sbjct: 859 VSQHRKPLQSITSNEDLNKGTLTFTSNVFQRETMKPVRTSLEGSMHVTLNLKHSLGNYLP 918

Query: 241 QKRMSDVSECDDFE 254
           QKRMSD  E DDFE
Sbjct: 919 QKRMSDAVEYDDFE 932

The following BLAST results are available for this feature:

BLAST of Cucsat.G15341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0PCS3	2.2e-57	61.11	Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana OX=3702 GN=CHR25 PE=1 SV...	[more]
A4PBL4	2.6e-42	56.33	DNA repair and recombination protein RAD54 OS=Oryza sativa subsp. japonica OX=39...	[more]
B3MMA5	1.7e-04	25.68	DNA repair and recombination protein RAD54-like OS=Drosophila ananassae OX=7217 ...	[more]

BLAST of Cucsat.G15341 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57560.2	1.62e-174	100.00	hypothetical protein Csa_010402 [Cucumis sativus]	[more]
XP_031737571.1	1.76e-174	100.00	protein CHROMATIN REMODELING 25 [Cucumis sativus]	[more]
XP_008456127.1	7.00e-165	94.49	PREDICTED: protein CHROMATIN REMODELING 25 isoform X1 [Cucumis melo] >KAA0037102...	[more]
XP_038878248.1	1.23e-156	91.34	protein CHROMATIN REMODELING 25 [Benincasa hispida]	[more]
TYK13976.1	1.22e-144	87.80	protein CHROMATIN REMODELING 25 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G15341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9A1	8.30e-175	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207350 PE=4 SV=1	[more]
A0A5A7T0X6	3.39e-165	94.49	Protein CHROMATIN REMODELING 25 isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3C3S4	3.39e-165	94.49	protein CHROMATIN REMODELING 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034961...	[more]
A0A5D3CU99	5.93e-145	87.80	Protein CHROMATIN REMODELING 25 isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1IUV2	5.32e-143	85.43	protein CHROMATIN REMODELING 25 OS=Cucurbita maxima OX=3661 GN=LOC111478773 PE=4...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 566..650 e-value: 1.6E-19 score: 80.8
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 541..649 e-value: 4.6E-14 score: 52.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 539..700 score: 16.598736
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 177..380 e-value: 1.8E-33 score: 127.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 207..372 score: 21.650356
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 156..421 e-value: 1.2E-87 score: 295.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 422..729 e-value: 4.6E-118 score: 395.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 426..812
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 157..422
None	No IPR available	GENE3D	1.20.120.850		coord: 444..713 e-value: 4.6E-118 score: 395.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 824..847
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 833..847
None	No IPR available	PANTHER	PTHR45629:SF7	DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED	coord: 31..836
None	No IPR available	PANTHER	PTHR45629	SNF2/RAD54 FAMILY MEMBER	coord: 31..836
None	No IPR available	CDD	cd18793	SF2_C_SNF	coord: 533..661 e-value: 1.39538E-55 score: 186.143
None	No IPR available	CDD	cd18004	DEXHc_RAD54	coord: 181..422 e-value: 1.60998E-131 score: 392.805
IPR000330	SNF2, N-terminal	PFAM	PF00176	SNF2_N	coord: 200..490 e-value: 5.0E-56 score: 189.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15341.T1	Cucsat.G15341.T1	mRNA
Cucsat.G15341.T2	Cucsat.G15341.T2	mRNA
Cucsat.G15341.T9	Cucsat.G15341.T9	mRNA
Cucsat.G15341.T6	Cucsat.G15341.T6	mRNA
Cucsat.G15341.T3	Cucsat.G15341.T3	mRNA
Cucsat.G15341.T4	Cucsat.G15341.T4	mRNA
Cucsat.G15341.T5	Cucsat.G15341.T5	mRNA
Cucsat.G15341.T10	Cucsat.G15341.T10	mRNA
Cucsat.G15341.T7	Cucsat.G15341.T7	mRNA
Cucsat.G15341.T8	Cucsat.G15341.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045003	double-strand break repair via synthesis-dependent strand annealing
biological_process	GO:0009553	embryo sac development
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006433	prolyl-tRNA aminoacylation
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0010109	regulation of photosynthesis
biological_process	GO:0048316	seed development
cellular_component	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140658	ATP-dependent chromatin remodeler activity
molecular_function	GO:0015616	DNA translocase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0004827	proline-tRNA ligase activity