Cucsat.G15279 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15279
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Zinc finger CCHC domain-containing protein 9
Location	ctg2009: 54435 .. 57722 (-)
RNA-Seq Expression	Cucsat.G15279
Synteny	Cucsat.G15279

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAGTTGGACTTGTACTTGGGCCTCAGCCCAATTTTGAATGAGAAGAAACCGACATGTAGTTTTTACTTTATACCCGTTCGCATAAACCTCGCCGTCACGCCGTTCGTTGAGAAAACCTCATCGGGATTTCACCGGAGCTGTCACCTTCCGATTCTTACGGACCCTGTTTTCAGGTGAAGATGGTGAACCAAAGGCAAAGACTTGCTCGGAAAAAGTACAAAGAAGAGCACCCAGAACTTTTCCCGAAAGCAGAGCCAACGCCACCGAAAGACCCGGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAAAAGGAAGAATCGAACTCAAACAGAGACCCAAATAAACCCCACAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTACCTGGGATGAAGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAATGACCACATTGCTAAGCTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGGTCTGTCTTTCTGTTTTACCTTTTGTGTTTCTGGAGTTTCACTGTCTGCTCAGTTCATGGAAAATTTGATCATTGGATAGGATTTTCTTTCAAAGCTACTATAGTAAGGAATGTGGTATCTGTGACAGTGGTTAGGATTGGATTCTGCTCTCCAATTTTAGGGAAACTTCTTAACTTAGTTGTTACTATGCTTAGGGTTCTTCTATCAACTATTGTCACTTTGGAATCGATTGTTAGAGTCCTTGGGGATAGAGGGACATGGATTATTTGGAAGAGCTCTGTGATGATAATCTCTTGGGGAAGTGGAAGGATTGTAAAGAAATAGTTTTTTTAAAAAAATATGGGGATATGCTTTCAAAGTGGGAATTCTGTTTACGGCATGTTAATGGTGTTAAACAAAGGTTTATGAAGCTTTATATGCTGCTGGGGTAGGATGTGATTTGTTCGTTTATTCCACCCTTTGGTTCTTGCAGTCTCCAATTTTCTTTCTATGCTAGGCTGAGCTATATGGTGGAAGATTTGGAATGAAAGAAATACAAAATTTTTTCAAGACAAAGCAAGAACCCCTGTGGAAGTTCTTAGTTCAGCTTTATTCAAAGTACTTTTTGGGTGTAAAAAACATACATCTGTTCTCGAGTTACAACTTAGATTTCCTTGTATCATTTTAAACAAAGCATGATGGGCTCATTTTGTAACACTGTGGATATTCCATTCATCAATGAAATTGTTTCTTATCCAAAAAAAGGCACATGGTCCTTCCTTTATGCTTTTGAATTTAAGGTTGTTTTTGGCTTTTGCATTCAAGGACATTAATAGCAAATTTTTTGTATTATTGCCATGCTGAAGGGAGTCATATGTTCATCTCTGTTACTTGACATTCACAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGTCTCAAGAATTGTCCAGACAAAAATGAAGGGACCGTGGACAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTAGCTAATTGTTCACAACCCCTTCAAGATGGTAAATTTTATTACAAATTCAAACTCATATTTATCAGTGCTTTGCATAATATGTAGAATATTTCATTTTGGGTTTCCTTGAGGCACTTGTATTCCCATCTTTCTAAACCAAATGCCTCTCGTATATTCCTATGAAATGAAGTGCTTTTGTGATACATATGCTCTGGAGCTTGTAAGGATTTATTTTTTTATTTTCTGAATTATGTGTATTGTTTTCCATCTTGGATCTGCAGGGGGAACTAAATTCGCCAGTTGTTTTATTTGTAATGAAGGTGGACACTTAAGCAAGAATTGTCCGAAGAATACTCACGGGATCTACCCTAAGGTATTTGGTTTAACCTTCACATATTTAACTTTCATGTGATTAGCAATGGTCACACACCAAACTCTTGGCTTCCCTATAATGTTCTAGGTTTGCCCATAGTCTCCTTGTATCATACAACATTAAGAATTTCCTTGGATGATATTCTGCAGGGTGGTTGTTGTAAAACTTGTGGAGAAGTCACACATTTAGCTAAGGATTGTCCAAAGAAAGGAACCCAAGTGTTTGATAGGGCTGGTGTATTTGGTTACAGATGTAAGTATTCCTGCTTCTTGTTTCTTATTTATATTTTTATTTGTAAGTTTCCAACTTTGTTTCTATCGTTTCGTTTTTAGTGTGTGCTGTTGTGACATGTTTGTTGGTACAATCTAAAAATTATAACCATTTTGAAAAAAGATGTCATAATTTCTTCATATGCATTATTCCTTCTTTATCATTGGGTTATTATGTACATCGAAGAATAGAGCTTCCTTATCTGTCTAGACAGTTTTCTTGAAGATATTTAACTCAATATAACTGAGATTAGAACAACAAAGCCAAAGTCATTATAACTGAGCTAACCATCTCCATTTGACTGAGATACGAGGGTCAGACATAGAAATCATGACCTTTGGTTCTTAAGGATATCATATCATTTCACCCACTCACGGTCAAGCCTACTTGGGGGAGCATCAAATAACATTGATATCATGATCTTCATTCCTTTTCTAGGAGTTTGCAGCTGTTCTTTACTACCATATTTATTCATCAAAGTAAATGATTATGAAGCTTCCTAAGGCCAACTCTAACCAGTCAAAATACTCCAAAGTTTTTTGCCAGTATTTGTTTTCACATCGATAATTTCTTGAACACACAAAAAAATAGTATTCCACAGATGTTTCTATAAAAGATGCTCTACTGGAGAAAGGTCACAGTTCAAAATTACTACTCCAAAAGCATAATCTCATGTACCAATTTGTGGACTAAAAGGGTGGGAGATAACTGGGAATGAGGAACCAAGACTTCTGGATTGACTAACTTCTGCTAAAACTATCTATAATAATATCTGGAAAAGGTGAAACGAAAGATACTATTATGAGTAATTATTTATTTTCTTGTCTCAGCATCTGGATACGTGGAAATGCCAAGACGACCAGAGACGAAGCTAATCAGTGGTGATGATCTTGAGGATGACTTCATGATTGATGAAGGTAGTTTGCAGATCAAAGATGCAAAAATGGGAAAGAAAAAGGGTCCTAAAGTTGTGAAGTTCATGGACTGATTGATAACTGTATGAGATAAATTGATTTGTTCTCTTGTGTTTGTTGTAAAGACCCTTTGTTTTGCACACAAGAGAAAACGGGGTAGTTTTGGAACGTTGGCCCATTATTATTTATAAGCGTTTCTCTTCCCTCCCTAATAGCAATTTATTTTCATCAGATAATGTCTCAAAAGGAGGCTCATTATTTGATGACTTTTTCGAGGAAGCAACGAAAATACAAACGATACTTTTCTTTTCTTCTTTAAATCTCATATTTAATAAAAAA

Coding sequence (CDS)

ATGGTGAACCAAAGGCAAAGACTTGCTCGGAAAAAGTACAAAGAAGAGCACCCAGAACTTTTCCCGAAAGCAGAGCCAACGCCACCGAAAGACCCGGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAAAAGGAAGAATCGAACTCAAACAGAGACCCAAATAAACCCCACAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTACCTGGGATGAAGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAATGACCACATTGCTAAGCTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGTCTCAAGAATTGTCCAGACAAAAATGAAGGGACCGTGGACAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTAGCTAATTGTTCACAACCCCTTCAAGATGGGGGAACTAAATTCGCCAGTTGTTTTATTTGTAATGAAGGTGGACACTTAAGCAAGAATTGTCCGAAGAATACTCACGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGAGAAGTCACACATTTAGCTAAGGATTGTCCAAAGAAAGGAACCCAAGTGTTTGATAGGGCTGGTGTATTTGGTTACAGATCATCTGGATACGTGGAAATGCCAAGACGACCAGAGACGAAGCTAATCAGTGGTGATGATCTTGAGGATGACTTCATGATTGATGAAGGTAGTTTGCAGATCAAAGATGCAAAAATGGGAAAGAAAAAGGGTCCTAAAGTTGTGAAGTTCATGGACTGA

Protein sequence

MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMIDEGSLQIKDAKMGKKKGPKVVKFMD

Homology

[Close]

BLAST of Cucsat.G15279 vs. ExPASy Swiss-Prot
Match: Q9HFF2 (Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC683.02c PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-17
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 96  QWEKNKICLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCSQ--PLQ------ 155
           Q  ++K C  CR++GH +++CP+  +      +C+ CG   HSL  CS+  PL+      
Sbjct: 72  QRNRDKFCFACRQQGHIVQDCPEAKDNV---SICFRCGSKEHSLNACSKKGPLKFAKCFI 131

Query: 156 --DGGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC 184
             + GHLS  C +N  G+YPKGGCCK C  V HLAKDC
Sbjct: 132 CHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDC 166

[Close]

BLAST of Cucsat.G15279 vs. ExPASy Swiss-Prot
Match: Q8N567 (Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens OX=9606 GN=ZCCHC9 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 46/139 (33.09%), Postives = 66/139 (47.48%), Query Frame = 0


Query: 102 ICLLCRRRGHSLKNCPDKNEG-TVDKKLCYNCGETGHSLANCSQPLQ------------- 161
           +C  CR+ GH + +CP   E   +   +CY CG T H +  C   +              
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188

Query: 162 --DGGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGY- 216
             + GHLS++CP N  G+Y  GG CK CG V HL KDCP+  +Q  +R    G  + G  
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE--SQNSERMVTVGRWAKGMS 248

[Close]

BLAST of Cucsat.G15279 vs. ExPASy Swiss-Prot
Match: Q8R1J3 (Zinc finger CCHC domain-containing protein 9 OS=Mus musculus OX=10090 GN=Zcchc9 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 51/165 (30.91%), Postives = 70/165 (42.42%), Query Frame = 0


Query: 102 ICLLCRRRGHSLKNCPDKNEG-TVDKKLCYNCGETGHSLANCSQPLQ------------- 161
           +C  CR+ GH + +CP   E   +   +CY CG T H ++ C   +              
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAKCFV 188

Query: 162 --DGGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYV 221
             + GHLS++CP NT G+Y  GG CK CG V H  KDC  +  Q  DR    G  + G  
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDC--RENQNSDRIITVGRWAKG-- 248

Query: 222 EMPRRPETKLISGDDLEDDFMIDEGSLQIKDAKMGKKKGPKVVKF 251
                          +  D+   E  L +   +  K K PKVV F
Sbjct: 249 ---------------MSADY---EDVLDVPKLQKPKTKVPKVVNF 271

[Close]

BLAST of Cucsat.G15279 vs. ExPASy Swiss-Prot
Match: P53849 (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIS2 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.2e-12
Identity = 37/115 (32.17%), Postives = 56/115 (48.70%), Query Frame = 0


Query: 76  ESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGET 135
           ++C++C    H+A+ C      +  ++C  C + GH   +C      TV+ K CYNCGET
Sbjct: 4   KACYVCGKIGHLAEDC------DSERLCYNCNKPGHVQTDCTMPR--TVEFKQCYNCGET 63

Query: 136 GHSLANCSQP----LQDGGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKK 187
           GH  + C+          GH+S+ CP+           C  CG   H+AKDC K+
Sbjct: 64  GHVRSECTVQRCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKE 110

[Close]

BLAST of Cucsat.G15279 vs. ExPASy Swiss-Prot
Match: Q04832 (DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11
Identity = 40/147 (27.21%), Postives = 57/147 (38.78%), Query Frame = 0


Query: 70  PGMKPGESCFICKANDHIAKLCPEKAQW--EKNKICLLCRRRGHSLKNCPDK-NEGTVDK 129
           P  +   SC  C    H A+ CPE      E++  C  C   GH  + CP++   G    
Sbjct: 10  PRTESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGA 69

Query: 130 KLCYNCGETGHSLANCSQPLQDG-------------GHLSKNCPKN-------------- 185
             C+ CGE GH   +C    + G             GHLS++CP +              
Sbjct: 70  MTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGR 129

[Close]

BLAST of Cucsat.G15279 vs. NCBI nr
Match: XP_031738808.1 (zinc finger CCHC domain-containing protein 9 [Cucumis sativus] >KGN57377.1 hypothetical protein Csa_010226 [Cucumis sativus])

HSP 1 Score: 511 bits (1316), Expect = 1.39e-182
Identity = 250/265 (94.34%), Postives = 250/265 (94.34%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDP KPHKK
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPTKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 EGTVDKKLCYNCGETGHSLANCSQPLQDGG-------------HLSKNCPKNTHGIYPKG 180
           EGTVDKKLCYNCGETGHSLANC QPLQDGG             HLSKNCPKNTHGIYPKG
Sbjct: 121 EGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 252
           DEGSLQIKDAKMGKKKGPKVVKFMD
Sbjct: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]

BLAST of Cucsat.G15279 vs. NCBI nr
Match: TYK22955.1 (zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 476 bits (1226), Expect = 1.36e-168
Identity = 240/283 (84.81%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MV+QRQRLARKKY+E HPELFPKAEPTPPKDPDKKKK SKFKRKK ESNSNRDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPDKKKK-SKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNK------------------I 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEKNK                  I
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFHCLLDI 120

Query: 121 CLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCSQPLQDGG------------ 180
           CLLCRRRGHSLKNCPDKNEGT+DKKLCYNCGETGHSLANC QPLQDGG            
Sbjct: 121 CLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180

Query: 181 -HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPR 240
            HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGV GYRSSGYVEMPR
Sbjct: 181 GHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGYVEMPR 240

Query: 241 RPETKLISGDDLEDDFMIDEGSLQIKDAKMGKKKGPKVVKFMD 252
           RPETKL+SGDDLEDDFMIDE  LQIKDAKMGKKKGPKVVKFMD
Sbjct: 241 RPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPKVVKFMD 282

[Close]

BLAST of Cucsat.G15279 vs. NCBI nr
Match: XP_038886312.1 (uncharacterized protein LOC120076526 [Benincasa hispida])

HSP 1 Score: 467 bits (1201), Expect = 2.79e-162
Identity = 230/263 (87.45%), Postives = 236/263 (89.73%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MV+QRQRLARKKY+EEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEES SNRD NKP+KK
Sbjct: 1   MVSQRQRLARKKYREEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESISNRDANKPYKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 EGTVDKKLCYNCGETGHSLANCSQPLQDGG-------------HLSKNCPKNTHGIYPKG 180
           EGT+DKKLCYNCGETGHSLANC QP+QDGG             HLSKNCPKNTHGIYPKG
Sbjct: 121 EGTLDKKLCYNCGETGHSLANCPQPIQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           G CKTCGEVTHLAKDCP KGTQV DR G  GYRSSGYVEMPRRPETK ISGDDLEDDFM 
Sbjct: 181 GGCKTCGEVTHLAKDCPNKGTQVIDRVGESGYRSSGYVEMPRRPETKRISGDDLEDDFMS 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKF 250
           DE  LQIKDAKMGKKKGPKVV+F
Sbjct: 241 DEDRLQIKDAKMGKKKGPKVVRF 263

[Close]

BLAST of Cucsat.G15279 vs. NCBI nr
Match: KAA0033654.1 (zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 465 bits (1196), Expect = 5.13e-162
Identity = 234/277 (84.48%), Postives = 238/277 (85.92%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MV+QRQRLARKKY+E HPELFPKAEPTPPKDPDKKKK SKFKRKK ESNSNRDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPDKKKK-SKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNK------------------I 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEKNK                  I
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFHCLLDI 120

Query: 121 CLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCSQPLQDGG------------ 180
           CLLCRRRGHSLKNCPDKNEGT+DKKLCYNCGETGHSLANC QPLQDGG            
Sbjct: 121 CLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180

Query: 181 -HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPR 240
            HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGV GYRSSGYVEMPR
Sbjct: 181 GHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGYVEMPR 240

Query: 241 RPETKLISGDDLEDDFMIDEGSLQIKDAKMGKKKGPK 246
           RPETKL+SGDDLEDDFMIDE  LQIKDAKMGKKKGPK
Sbjct: 241 RPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPK 276

[Close]

BLAST of Cucsat.G15279 vs. NCBI nr
Match: KAG6576724.1 (hypothetical protein SDJN03_24298, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449 bits (1155), Expect = 4.66e-158
Identity = 223/265 (84.15%), Postives = 230/265 (86.79%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MV+QRQRLARKKY+EEHPELFP+ EPTPPKDPDKKKKKSKFKRKK ESNS RDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREEHPELFPEVEPTPPKDPDKKKKKSKFKRKKAESNSTRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 EGTVDKKLCYNCGETGHSLANCSQPLQDGG-------------HLSKNCPKNTHGIYPKG 180
           E TVDKKLCYNCGETGHSLANC QPLQDGG             HLSKNCPKNTHGIYPKG
Sbjct: 121 ERTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           GCCKTCGEVTHLAKDCP K TQ F      G RSSGYVEM RRPET+ +SGDDLEDDF I
Sbjct: 181 GCCKTCGEVTHLAKDCPNKATQ-FSAGAYDGNRSSGYVEMRRRPETRRVSGDDLEDDFNI 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 252
           DE  LQ+KDAK+ KKKGPKVVKFMD
Sbjct: 241 DEDHLQMKDAKVEKKKGPKVVKFMD 264

[Close]

BLAST of Cucsat.G15279 vs. ExPASy TrEMBL
Match: A0A0A0L9S9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182130 PE=4 SV=1)

HSP 1 Score: 511 bits (1316), Expect = 6.75e-183
Identity = 250/265 (94.34%), Postives = 250/265 (94.34%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDP KPHKK
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPTKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 EGTVDKKLCYNCGETGHSLANCSQPLQDGG-------------HLSKNCPKNTHGIYPKG 180
           EGTVDKKLCYNCGETGHSLANC QPLQDGG             HLSKNCPKNTHGIYPKG
Sbjct: 121 EGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 252
           DEGSLQIKDAKMGKKKGPKVVKFMD
Sbjct: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]

BLAST of Cucsat.G15279 vs. ExPASy TrEMBL
Match: A0A5D3DHA5 (Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00580 PE=4 SV=1)

HSP 1 Score: 476 bits (1226), Expect = 6.56e-169
Identity = 240/283 (84.81%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MV+QRQRLARKKY+E HPELFPKAEPTPPKDPDKKKK SKFKRKK ESNSNRDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPDKKKK-SKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNK------------------I 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEKNK                  I
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFHCLLDI 120

Query: 121 CLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCSQPLQDGG------------ 180
           CLLCRRRGHSLKNCPDKNEGT+DKKLCYNCGETGHSLANC QPLQDGG            
Sbjct: 121 CLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180

Query: 181 -HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPR 240
            HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGV GYRSSGYVEMPR
Sbjct: 181 GHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGYVEMPR 240

Query: 241 RPETKLISGDDLEDDFMIDEGSLQIKDAKMGKKKGPKVVKFMD 252
           RPETKL+SGDDLEDDFMIDE  LQIKDAKMGKKKGPKVVKFMD
Sbjct: 241 RPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPKVVKFMD 282

[Close]

BLAST of Cucsat.G15279 vs. ExPASy TrEMBL
Match: A0A5A7SR44 (Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001180 PE=3 SV=1)

HSP 1 Score: 465 bits (1196), Expect = 2.48e-162
Identity = 234/277 (84.48%), Postives = 238/277 (85.92%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MV+QRQRLARKKY+E HPELFPKAEPTPPKDPDKKKK SKFKRKK ESNSNRDPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPDKKKK-SKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNK------------------I 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEKNK                  I
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKVCLSGLPFVLLEFHCLLDI 120

Query: 121 CLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCSQPLQDGG------------ 180
           CLLCRRRGHSLKNCPDKNEGT+DKKLCYNCGETGHSLANC QPLQDGG            
Sbjct: 121 CLLCRRRGHSLKNCPDKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNES 180

Query: 181 -HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPR 240
            HLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGV GYRSSGYVEMPR
Sbjct: 181 GHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVSGYRSSGYVEMPR 240

Query: 241 RPETKLISGDDLEDDFMIDEGSLQIKDAKMGKKKGPK 246
           RPETKL+SGDDLEDDFMIDE  LQIKDAKMGKKKGPK
Sbjct: 241 RPETKLVSGDDLEDDFMIDEDRLQIKDAKMGKKKGPK 276

[Close]

BLAST of Cucsat.G15279 vs. ExPASy TrEMBL
Match: A0A6J1HYC2 (uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373 PE=3 SV=1)

HSP 1 Score: 453 bits (1165), Expect = 1.39e-156
Identity = 220/265 (83.02%), Postives = 234/265 (88.30%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPNKPHKK 60
           MV++RQ+LARKKY+EEHPELFPKAEPTPPKDP+KKKKKS+FKRKK ES+S  DPNKPHKK
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKSEFKRKKGESDSRNDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120
           GFKKHPLRVPGMKPGESCFICKA DHIAK CPEKAQWEKNKICLLCRRRGHSLKNCPDK 
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKT 120

Query: 121 EGTVDKKLCYNCGETGHSLANCSQPLQDGG-------------HLSKNCPKNTHGIYPKG 180
           E TVDKKLCYNCGETGHSLANC QPLQ GG             HLSKNCPKNTHGIYPKG
Sbjct: 121 EDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           GCCKTCGEVTHLAKDCPKKGTQV+   GV   RSSGYVEM RRPET+L+SGDDLEDDFM+
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETRLVSGDDLEDDFMV 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 252
           +E +LQIKDAK+G KKGPKVVKFMD
Sbjct: 241 EEDNLQIKDAKLGNKKGPKVVKFMD 265

[Close]

BLAST of Cucsat.G15279 vs. ExPASy TrEMBL
Match: A0A6J1G1V2 (uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC111449917 PE=3 SV=1)

HSP 1 Score: 449 bits (1154), Expect = 7.44e-155
Identity = 222/269 (82.53%), Postives = 234/269 (86.99%), Query Frame = 0


Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKK----KKSKFKRKKEESNSNRDPNK 60
           MV++RQ+LARKKY+EEHPELFPKAEPTPPKDP+KKK    KKS+FKRKK ES+S  DP K
Sbjct: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKEKKKKKSEFKRKKGESDSRNDPIK 60

Query: 61  PHKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNC 120
           PHKKGFKKHPLRVPGMKPGESCFICKA DHIAK CPEKAQWEKNKICLLCRRRGHSLKNC
Sbjct: 61  PHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNC 120

Query: 121 PDKNEGTVDKKLCYNCGETGHSLANCSQPLQDGG-------------HLSKNCPKNTHGI 180
           PDK E TVDKKLCYNCGETGHSLANC QPLQ GG             HLSKNCPKNTHGI
Sbjct: 121 PDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGI 180

Query: 181 YPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLED 240
           YPKGGCCKTCGEVTHLAKDCPKKGTQVF   G  G RSSGYVEM RRPETKL+SGDDLED
Sbjct: 181 YPKGGCCKTCGEVTHLAKDCPKKGTQVFAGPGASGNRSSGYVEMSRRPETKLVSGDDLED 240

Query: 241 DFMIDEGSLQIKDAKMGKKKGPKVVKFMD 252
           DFM++E +LQIKDAK+GKKKGPKVVKFMD
Sbjct: 241 DFMVEEDNLQIKDAKLGKKKGPKVVKFMD 269

The following BLAST results are available for this feature:

BLAST of Cucsat.G15279 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9HFF2	1.0e-17	42.86	Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q8N567	2.5e-16	33.09	Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens OX=9606 GN=ZCCHC9 P...	[more]
Q8R1J3	3.0e-14	30.91	Zinc finger CCHC domain-containing protein 9 OS=Mus musculus OX=10090 GN=Zcchc9 ...	[more]
P53849	8.2e-12	32.17	Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]
Q04832	1.4e-11	27.21	DNA-binding protein HEXBP OS=Leishmania major OX=5664 GN=HEXBP PE=4 SV=1	[more]

BLAST of Cucsat.G15279 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738808.1	1.39e-182	94.34	zinc finger CCHC domain-containing protein 9 [Cucumis sativus] >KGN57377.1 hypot...	[more]
TYK22955.1	1.36e-168	84.81	zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa]	[more]
XP_038886312.1	2.79e-162	87.45	uncharacterized protein LOC120076526 [Benincasa hispida]	[more]
KAA0033654.1	5.13e-162	84.48	zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa]	[more]
KAG6576724.1	4.66e-158	84.15	hypothetical protein SDJN03_24298, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cucsat.G15279 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9S9	6.75e-183	94.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182130 PE=4 SV=1	[more]
A0A5D3DHA5	6.56e-169	84.81	Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7SR44	2.48e-162	84.48	Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1HYC2	1.39e-156	83.02	uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373...	[more]
A0A6J1G1V2	7.44e-155	82.53	uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 182..198 e-value: 0.019 score: 21.8 coord: 128..144 e-value: 0.003 score: 26.7 coord: 102..118 e-value: 0.33 score: 14.2 coord: 77..93 e-value: 0.057 score: 18.9 coord: 155..171 e-value: 0.0019 score: 27.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 156..171 e-value: 2.8E-4 score: 20.8 coord: 128..144 e-value: 3.0E-5 score: 23.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 156..171 score: 9.669202
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 129..144 score: 9.685684
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 183..198 score: 9.026372
None	No IPR available	GENE3D	4.10.60.10		coord: 71..123 e-value: 3.1E-9 score: 38.4
None	No IPR available	GENE3D	4.10.60.10		coord: 124..176 e-value: 3.3E-12 score: 48.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR47798	OS04G0555800 PROTEIN	coord: 1..264
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 101..117 e-value: 0.016 score: 14.9 coord: 182..198 e-value: 0.67 score: 9.7
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 122..173
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 71..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15279.T1	Cucsat.G15279.T1	mRNA
Cucsat.G15279.T2	Cucsat.G15279.T2	mRNA
Cucsat.G15279.T3	Cucsat.G15279.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding