Cucsat.G13693 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGTGTTATATTTACGAAAATTTACTTTCAAAATATAATATCGATAAAAGGTAAGTATAAATAAAAATCACAATACAAACGTTTTGAAGAAGAAGTAAAGGCCAACAGTTGTGTAGCCCAGAACTCAAACCCTAAACCCTACATATCTCTCCGTCGCACCGCTCTTCTCTTTTTCATCGGCCCATCGGGAATCATATGGCTTTCTTCTCCACCGTAAGGCGCGTTCTTAATGGATCTTCTTCTTCTTCTTCTTCCTCTTCCATTCTCCGATCCCAATGGAATGCCGTTCGTCTCAGCTCAACTCTCACATCACCCAAACTCTTCATCAGTGGTAAGCCTCACAGAACCATCTTGTGCTACGCCTTTCTTCTTATTTGGATTATTGAGAATTATTCAGAATTTTGGTATTGGGATCAATTTTCTGGTTGGATTATGAGAAATTTCCTGTATTCTTGCTCACCCTTCATTTCTTACATTTGAACAATAGTTACGAAGAACTAAATGGGAGATATAGTTAATTAACTATGCTCTGTTCCGTTACTTTTATCCCATTTGTTTATGGTCTTTGTGTTTCTATTTACATTTATGAAATTGCTTCAGTTTTCAGTAAGTGGTGGGGCTTGTTTGGGTGTAGGAATTTAGAAAATTATTCCTATCCTTATCATTCATCAATCATGCGTGCTGCTTGATAGCTTAAGCAATTAAGAAAGAATCATCATAGTTGGCTTGGTAAGAAGTCGGCAGTCGCTTATCTAAAATTTAATATCCTAATTTCTCCTTGACACCCTAATGTTGTAAGGTTAGAATGGATTGTCCGTTAAACCTAGTCCAAATACTCACAAATATATATATTAAAAATATTGAGGTCGTATAACTTGAATTGTTGTAAGAAAGTTAATTCATTTCTTATGCAACACAATGTTCCCTTTGCATTCGAAGGACTGCAGTTTGATTAACAAACCTTGCAAAGAACGAAGGGAGTAGGTATACAAAAATCCCCCCCCCCCCCCCCCCCCCCCCATCCCCACACACACAGAGAGAAGAAGAACAAAGAAAGAAAGAAAAGAAGATGAACCTTCTCATTAGAAAAAGTTCACTAGACAGCACCCTTATTGCCTGCATCTTCGAATCCTTTATAAATCCTTCATTTGTTCTTTCATTCTGTAAGAAACACCTCTCAATTAATGAAGGGGTAGTGGTATTAGAAACCCATCTCTTCTCTCTTTTTTTTTTTATTTTTGTAAGTATGGTAGTTTTGTTTGTGTATAATTCGAATATCATAAAGATTTCCATATATGTCAAGTCCCTTTAGTGGAGTTCTCGGTCTGCCAATATACCCCAAGAAGTAGACAGAGTTACAATGCACATTTAGAAAATTCTAGGAATTTGTTGTTGATAGATAGAATGGGTCCAAAGACCAAGTCAACATATCCGGTATAAATAGGGTCGAACAAATATGATTTTTTTTCTTAATCTAATATTCTTTTATGAATTAAAGAGTAGTAGAGTATAGAAGTACATAACAAATTTAGATGGGATATGCCTGGTGAAAGTCTCACTTCTATAAAACGACAGGTCTTTCGAGATTAACAACAGATGAGAAGCTCCGAGAAGCCTTTTCTTCCTTTGGTCAGCTTGTAGATGGTATAGCACTCTCTCCCTCTCTCCAATTTACAAATCTATGAACATTTGTTCCAGAGTGCAACATCTTGACATTGCCTCAACATTTGTACAGCAAAGGTTGTAACCGATAGGGCGACGGGAAGATCAAAGGGATTTGCATTTGTGACCTACAGTACAATAGACGAGGCTGAGAAAGCTAGAGAAGAAATGAATGCAAAGTTTCTTGATGGATGGGTTATTTTTGTTGATCCTGCCAAACCCAGGGAGCCTAGGCCTCCTCCACAGCCTCAATCTGAGACCTCTGAATTTGGTATCAGAACAAACAAGACAATTGGTTGGTGTGGATAATTGCTTGCAGAATTTTTGAAATCTCATAGCATTTGGTCATTTTTTCCAATTGCATATGGTTGAGTCGGATGTATGTTCTTCATCCATGGGTACTATAGATAAAATTCATGAACACCACTCTCAAGGTGGCCTCAAAACTGCGAGAAATTGCGCATTATTTTGTTATAGATATGGATTTGGATTCAGAAAAGTATTTACTGACCTTAGGTTTATTACCCATATTTTAATTCTTAACTTCTTATATGTATTTTGTTTTAGTTCCTATATTTAATAATTATTCTATTTTGATATCTAATTTTATGTGAAAATTGGAAACATCTTTTG ATGGCTTTCTTCTCCACCGTAAGGCGCGTTCTTAATGGATCTTCTTCTTCTTCTTCTTCCTCTTCCATTCTCCGATCCCAATGGAATGCCGTTCGTCTCAGCTCAACTCTCACATCACCCAAACTCTTCATCAGTGGTCTTTCGAGATTAACAACAGATGAGAAGCTCCGAGAAGCCTTTTCTTCCTTTGGTCAGCTTGTAGATGCAAAGGTTGTAACCGATAGGGCGACGGGAAGATCAAAGGGATTTGCATTTGTGACCTACAGTACAATAGACGAGGCTGAGAAAGCTAGAGAAGAAATGAATGCAAAGTTTCTTGATGGATGGGTTATTTTTGTTGATCCTGCCAAACCCAGGGAGCCTAGGCCTCCTCCACAGCCTCAATCTGAGACCTCTGAATTTGGTATCAGAACAAACAAGACAATTGGTTGGTGTGGATAA MAFFSTVRRVLNGSSSSSSSSSILRSQWNAVRLSSTLTSPKLFISGLSRLTTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWVIFVDPAKPREPRPPPQPQSETSEFGIRTNKTIGWCG Homology
BLAST of Cucsat.G13693 vs. ExPASy Swiss-Prot
Match: Q9FIU6 (Organelle RRM domain-containing protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ORRM2 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.3e-22 Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy Swiss-Prot
Match: Q9FFZ6 (Small RNA-binding protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-RBP11 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.4e-16 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy Swiss-Prot
Match: Q8L440 (Organelle RRM domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORRM1 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.1e-16 Identity = 46/103 (44.66%), Postives = 70/103 (67.96%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy Swiss-Prot
Match: Q9FX45 (Organelle RRM domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORRM6 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.5e-15 Identity = 57/132 (43.18%), Postives = 74/132 (56.06%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy Swiss-Prot
Match: Q6YWP9 (Organelle RRM domain-containing protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ORRM1 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.6e-15 Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = 0
BLAST of Cucsat.G13693 vs. NCBI nr
Match: XP_031739912.1 (organelle RRM domain-containing protein 2, mitochondrial [Cucumis sativus] >KAE8649523.1 hypothetical protein Csa_018111 [Cucumis sativus]) HSP 1 Score: 285 bits (729), Expect = 8.48e-97 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cucsat.G13693 vs. NCBI nr
Match: XP_008447620.1 (PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Cucumis melo]) HSP 1 Score: 271 bits (694), Expect = 1.78e-91 Identity = 140/146 (95.89%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cucsat.G13693 vs. NCBI nr
Match: XP_022143719.1 (organelle RRM domain-containing protein 2, mitochondrial [Momordica charantia]) HSP 1 Score: 255 bits (652), Expect = 4.52e-85 Identity = 129/146 (88.36%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Cucsat.G13693 vs. NCBI nr
Match: XP_038881167.1 (organelle RRM domain-containing protein 2, mitochondrial [Benincasa hispida]) HSP 1 Score: 253 bits (646), Expect = 3.72e-84 Identity = 131/149 (87.92%), Postives = 138/149 (92.62%), Query Frame = 0
BLAST of Cucsat.G13693 vs. NCBI nr
Match: XP_022972736.1 (organelle RRM domain-containing protein 2, mitochondrial [Cucurbita maxima]) HSP 1 Score: 251 bits (641), Expect = 2.22e-83 Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy TrEMBL
Match: A0A1S3BHV3 (glycine-rich RNA-binding protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490031 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 8.64e-92 Identity = 140/146 (95.89%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy TrEMBL
Match: A0A6J1CQ59 (organelle RRM domain-containing protein 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013559 PE=4 SV=1) HSP 1 Score: 255 bits (652), Expect = 2.19e-85 Identity = 129/146 (88.36%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy TrEMBL
Match: A0A6J1I6S8 (organelle RRM domain-containing protein 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471250 PE=4 SV=1) HSP 1 Score: 251 bits (641), Expect = 1.08e-83 Identity = 130/149 (87.25%), Postives = 138/149 (92.62%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy TrEMBL
Match: A0A6J1HDN1 (organelle RRM domain-containing protein 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111463207 PE=4 SV=1) HSP 1 Score: 250 bits (639), Expect = 2.10e-83 Identity = 132/148 (89.19%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of Cucsat.G13693 vs. ExPASy TrEMBL
Match: A0A7N2LNA5 (RRM domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 228 bits (580), Expect = 2.00e-74 Identity = 113/146 (77.40%), Postives = 130/146 (89.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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