Cucsat.G13649 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTGGGTATGTTGATTTCTTTGCTTACTGATGCTTTATGTTACTCTACTGTTGATTATTCAATTGGGTGTTCAAATTTTCTCTTGGCTTTTGTTTGATTTCGTAGTTCTTGTATATTTTCTTTCTATACATTGTTTATCACTGTGCTGCATTCTGGTTATGTTTATGCCTGTTCGATGATTTTGAAACGATGGTGAATTTGTCTGTTGTTTTTCTTTTTGATTCTTAACTGAAGTGGTTTGGATGAGAAAAATGCTGGCTTCTAGTTTTAAACAGAGATGATTTAATACTCGTTCTATTAATAGATTATAGGTTGTTTTCTTTTGGTTTTCTTGTATTTTACTTTTCTGTTTATAGATTCTTATCGCAGCACAGATGCCAAACTCAGTAAAGAGGAAAAGAGAAAGGAAAAAAAATTGGTGCTTCTGTTGGGTTTTGTTTTCTTGCTGCTTGTACTTGTGCCAATTAATGATATAGCTTTTATTTTCTCACTCTTAAACGCACTTTTTCTGTTGTGCAAGCAAACAATGATTCCATCCGATTGTAACTGTCATGTGTTGTTGTAAATTTTAATGCATACATGAGTTTTCAATTTAAAGAACGTTGAAGATTCTTCCTCGTAGCTTCCGTTTCCAACAGGTTCTGTTCTGTCTATGGTATGTTATTATAAAAGAAGGATTTAATGATCCAAAACTTAATTGATTTTACTTCTTGCGCATGCAATGCTTTCAAATTGCATCTTGCTTCTCATTGCTCTTGATTACTGGATGTGAAATTCATTTTGGTATGTAATAAATGCACACAGTTATTGTCCTTGATTTGTGATTTAGGAGATCCATGTTTTGAATGTTTTTTCTATTATTATCCTATTTGCATTGCACATTTGAAAATAAATATCATTGAGTGTGAAGTTTAAATGGAATCCACATAGCTGAAATGATCATCCTACTAAATTGATTGGTCCAGGGAACAAGTTTTGAGATGCTTGCTTATCATAAGTTTCTACGGAACCAATTATGAGTTCTTCAAACAAGTCCCTCTAGCAATGACACTTCTTCTTTTTTAATTAAATCTCAGAGATGATTGTATGAGTACCATAATAGAATTCAGAGAGAAGGGGATGTATCAGCAACCCAAGTCAAGGGAAGAACATGCTTCTTCTGCAGCCAGCTTCTGCAAAGAAGTGACCGAGTTGCGCCTTACATCGATAGATTCTCAACCAGCAACTTCTCGTCCTGAGTTCAAAGGTGTCACTTTCAGGAAAGCTTCAACTGGTGGCTTTGCTAGGAGTCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGGTATCGTATTCTTATTGTGATGACTTTCAAAACATATAACGCTTTGCTCATTGATTATTCTGAAAAAAAAAACGTTTCATAGATAAATAAATTCATCCAATAAATAGAACACTGACGCATTTAATTTGGTTGAAGGCCTAGAACCCTAATGGATTATTGAGTCACTCTTTTGTCCCCGGAAATAGCTTTCGGACCAAGTATCAAAAGGACTCTATATAACTTCACTTTCTGTTCAAATGGAAGGCTAGGAATTTTGTTTAAGCGTTGATTTGCATTATGATTGAGTTATTACATTTGAGGTAACTCCAATGCATAACAGCTAACGTAATTTTACGGTTCAGTGTGCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGCAAGGGTTCAGAATTGCTGCCCTACCTGTCGGCATGAGCTTGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCCCTTGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACACGAGAAGAATTGTAAATACCGGCCGTACAACTGCCCTTACGCTGGAGGTGAATGTCATGTAACTGGTGACATTCCATCCCTTGTCATGCATCTCAAGGATGATCACGAGGTGGATATGCATGATGGATGTTCCTTCAGTCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCCACATGGATGCTAACTGTAAGATGTCTCTCTTTATTTCAGATTCTTAGGAATAATGAAAGCAAAGAAGAAGCAATTTCATGTAATGAACATCCTCCTGATTTCTCAATTGATCCAATTCAGGTTTTCAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCATTTCGCCTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGACGACAGCGAGGCAAAACAGTTCTCATACAGTCTTGAAGTTGGTGGAAATGGAAGAAAACTCATCTGGCAAGGTATTCCAAGAAGTATTCGCGACAGCCATCGGAAGGTTCGAGACAGTCATGATGGACTAATTATTCAGAGGAAATTGGCATTATTTTGCTCTGGAAACGAGGGGATGGAACTGAAGTTAAAGGTTACAGGACGAATATGGAGAGTGAGGTGACAACAACAAATGAATATTCATCTATCAAACTCAAAACTTGTACAATATGTTGTGACATTGTGACCTTTGTACATGCCTCGGCCCTCCTACAATTCAGCCTTTTTTTAGAACCTCTTATTTCTTCATCACCTCTACATTTTCTGCTTCATTTTCTTTTCTCTATAGTTTATTTATTTTTATCTAATTATTAAAATAGAATGATAGAAATAAAACTAACAAGAATGCCAACCCATTTTCATAGTAATGCAATGCTAAATGTAAAACAACTCAGCATATTATGCATAGAACTTAGAAGAATACAAAAAGGTGTTGGACAACTTTAACAGTTAAGGCTATTGAAGTTTTTACCTTTTTGGTTCTTCACCTTCTCTTCTTTTTATGTTGTTGAAAGATAACATTTGTTAGATAGTTTTAACAATTTATGTATCATAAATTTTGAAAGTTGATTAAACTTTGTAAATAATCTTAAATTAAATTGTGATA ATGAGTACCATAATAGAATTCAGAGAGAAGGGGATGTATCAGCAACCCAAGTCAAGGGAAGAACATGCTTCTTCTGCAGCCAGCTTCTGCAAAGAAGTGACCGAGTTGCGCCTTACATCGATAGATTCTCAACCAGCAACTTCTCGTCCTGAGTTCAAAGGTGTCACTTTCAGGAAAGCTTCAACTGGTGGCTTTGCTAGGAGTCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTGCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGCAAGGGTTCAGAATTGCTGCCCTACCTGTCGGCATGAGCTTGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCCCTTGAGCTCCCTTGTGTGTACCAAAACCTAGGTTGCATTGACATGTTCCCATACTACAGCAAGCTTAAACACGAGAAGAATTGTAAATACCGGCCGTACAACTGCCCTTACGCTGGAGGTGAATGTCATGTAACTGGTGACATTCCATCCCTTGTCATGCATCTCAAGGATGATCACGAGGTGGATATGCATGATGGATGTTCCTTCAGTCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCCACATGGATGCTAACTGTTTTCAACTGCTTTGGACGACAATTCTGTTTGCACTTTGAAGCATTTCGCCTAGGAACAGCACCTGTTTACATGGCATTCCTCCGGTTCATGGGTGACGACAGCGAGGCAAAACAGTTCTCATACAGTCTTGAAGTTGGTGGAAATGGAAGAAAACTCATCTGGCAAGGTATTCCAAGAAGTATTCGCGACAGCCATCGGAAGGTTCGAGACAGTCATGATGGACTAATTATTCAGAGGAAATTGGCATTATTTTGCTCTGGAAACGAGGGGATGGAACTGAAGTTAAAGGTTACAGGACGAATATGGAGAGTGAGGTGA MSTIIEFREKGMYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKASTGGFARSRNDVHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAESLELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHEVDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEGMELKLKVTGRIWRVR Homology
BLAST of Cucsat.G13649 vs. ExPASy Swiss-Prot
Match: Q10L91 (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.4e-48 Identity = 92/140 (65.71%), Postives = 110/140 (78.57%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy Swiss-Prot
Match: Q9M2P4 (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.8e-48 Identity = 93/140 (66.43%), Postives = 110/140 (78.57%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy Swiss-Prot
Match: P93748 (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=SINAT1 PE=1 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.2e-47 Identity = 92/140 (65.71%), Postives = 110/140 (78.57%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy Swiss-Prot
Match: Q84JL3 (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 8.3e-46 Identity = 86/140 (61.43%), Postives = 109/140 (77.86%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy Swiss-Prot
Match: Q9STN8 (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 3.5e-44 Identity = 84/140 (60.00%), Postives = 107/140 (76.43%), Query Frame = 0
BLAST of Cucsat.G13649 vs. NCBI nr
Match: XP_031740164.1 (E3 ubiquitin-protein ligase SINAT2-like [Cucumis sativus] >KGN54095.1 hypothetical protein Csa_018085 [Cucumis sativus]) HSP 1 Score: 229 bits (585), Expect = 1.91e-72 Identity = 114/142 (80.28%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cucsat.G13649 vs. NCBI nr
Match: KAA0040047.1 (E3 ubiquitin-protein ligase SINAT2 [Cucumis melo var. makuwa] >TYK21670.1 E3 ubiquitin-protein ligase SINAT2 [Cucumis melo var. makuwa]) HSP 1 Score: 228 bits (582), Expect = 3.91e-72 Identity = 113/142 (79.58%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cucsat.G13649 vs. NCBI nr
Match: XP_008449780.1 (PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Cucumis melo]) HSP 1 Score: 228 bits (582), Expect = 5.43e-72 Identity = 113/142 (79.58%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cucsat.G13649 vs. NCBI nr
Match: XP_038900385.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X4 [Benincasa hispida]) HSP 1 Score: 225 bits (573), Expect = 1.36e-70 Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of Cucsat.G13649 vs. NCBI nr
Match: XP_038900384.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X3 [Benincasa hispida] >XP_038900386.1 E3 ubiquitin-protein ligase SINAT2-like isoform X3 [Benincasa hispida]) HSP 1 Score: 225 bits (573), Expect = 1.83e-70 Identity = 111/141 (78.72%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy TrEMBL
Match: A0A0A0KWV9 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G285710 PE=3 SV=1) HSP 1 Score: 229 bits (585), Expect = 9.24e-73 Identity = 114/142 (80.28%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy TrEMBL
Match: A0A5D3DDZ5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00330 PE=3 SV=1) HSP 1 Score: 228 bits (582), Expect = 1.89e-72 Identity = 113/142 (79.58%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy TrEMBL
Match: A0A1S3BMT4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491565 PE=3 SV=1) HSP 1 Score: 228 bits (582), Expect = 2.63e-72 Identity = 113/142 (79.58%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy TrEMBL
Match: A0A6J1DI06 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111021266 PE=3 SV=1) HSP 1 Score: 209 bits (532), Expect = 9.23e-65 Identity = 103/142 (72.54%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of Cucsat.G13649 vs. ExPASy TrEMBL
Match: A0A7J7BV06 (RING-type E3 ubiquitin transferase OS=Tripterygium wilfordii OX=458696 GN=HS088_TW23G00228 PE=3 SV=1) HSP 1 Score: 200 bits (509), Expect = 1.74e-61 Identity = 97/140 (69.29%), Postives = 111/140 (79.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|