Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGCACCGTTTTATCTCCCGAGTATAAAATACAAAGACTCGGCATCTGTTTTATGCATCACCCGTGTGAGAAAGAAAAACAGAATTACGAACTGAACCAACCAGAACACGGCGTCGTAATGACGAAGCAATTGAAAGAGAATCAAGAACCTCTAATCTCCGGCGGAGACTTTTCAGCAGCGGAACCGGAGGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACACTCCGAAGACGTACAAGGAAGTGGAGACGGATCAAGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAACTAGCGTATGTTCATTACCAGGTTCGGAGAATCAGAGAAGAGGATTTGCATCTTGGTGAAGACATCGGTGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATTGGTGGAGATTGGTGCGATGTTCCACATAATAATCCTCCTCCTCCTCCTCATTCTTCTTTTCATAATCATCGCGTTGGTTCTCAGATGAATGTCGTGATTTTCTCAAGGCCGATCTTGCCGAGCTCGCCGCTCGGCGGGAAGAACACGTTTAGAGCCTTAAGTTAAAACAAGGTACGATTGTTCAATTTTTAATTTCGGTTCAGTGAAATTAATTGAATCGATCAGCGAGGAAATTGAAGGTCTGGATTCTTGTGATTGAGTTAGTTTTGGCTACTGGTTTTGCAGGAGAGGTGGAAAAATGAGAGGAAATAGTTAGACGTGATCAAGGAAGTGAAAAATTGGGGGAAAATTTTGATCCGTGGTTCATGGCTGCACAGAAAATTTAGGGTTTGTTTGAATGTGGAAGGGAAAATTTGGAACGATGAACAAAAATAAAGATTAAAAAAAGAAAAAAAAAATGGCGATGAAACGATTCATACTCCACTGTAAAGTCTAATCTCAATGGTAAATGAGAGGAAATTGCATGAATCCTGCCTATGTAAATAAATTTCCTGCCTTTACAT
Coding sequence (CDS)
CGCACCGTTTTATCTCCCGAGTATAAAATACAAAGACTCGGCATCTGTTTTATGCATCACCCGTGTGAGAAAGAAAAACAGAATTACGAACTGAACCAACCAGAACACGGCGTCGTAATGACGAAGCAATTGAAAGAGAATCAAGAACCTCTAATCTCCGGCGGAGACTTTTCAGCAGCGGAACCGGAGGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACACTCCGAAGACGTACAAGGAAGTGGAGACGGATCAAGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAACTAGCGTATGTTCATTACCAGGTTCGGAGAATCAGAGAAGAGGATTTGCATCTTGGTGAAGACATCGGTGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATTGGTGGAGATTGGTGCGATGTTCCACATAATAATCCTCCTCCTCCTCCTCATTCTTCTTTTCATAATCATCGCGTTGGTTCTCAGATGAATGTCGTGATTTTCTCAAGGCCGATCTTGCCGAGCTCGCCGCTCGGCGGGAAGAACACGTTTAGAGCCTTAAGTTAA
Protein sequence
RTVLSPEYKIQRLGICFMHHPCEKEKQNYELNQPEHGVVMTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS
Homology
BLAST of Cucsat.G13252 vs. NCBI nr
Match:
XP_011652239.2 (uncharacterized protein LOC105435002 [Cucumis sativus])
HSP 1 Score: 385 bits (990), Expect = 4.74e-135
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query: 18 MHHPCEKEKQNYELNQPEHGVVMTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHT 77
MHHPCEKEKQNYELNQPEHGVVMTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHT
Sbjct: 1 MHHPCEKEKQNYELNQPEHGVVMTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHT 60
Query: 78 PKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEG 137
PKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEG
Sbjct: 61 PKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEG 120
Query: 138 FNAKEKINSIGGDWCDVPHNNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTF 197
FNAKEKINSIGGDWCDVPHNNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTF
Sbjct: 121 FNAKEKINSIGGDWCDVPHNNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTF 180
Query: 198 RALS 201
RALS
Sbjct: 181 RALS 184
BLAST of Cucsat.G13252 vs. NCBI nr
Match:
KAE8651222.1 (hypothetical protein Csa_001107 [Cucumis sativus])
HSP 1 Score: 337 bits (863), Expect = 5.05e-116
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 40 MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES 99
MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES
Sbjct: 1 MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES 60
Query: 100 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNP 159
PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNP
Sbjct: 61 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNP 120
Query: 160 PPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
PPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS
Sbjct: 121 PPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 162
BLAST of Cucsat.G13252 vs. NCBI nr
Match:
XP_008443420.1 (PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo] >KAA0053752.1 uncharacterized protein E6C27_scaffold135G001310 [Cucumis melo var. makuwa] >TYK25651.1 uncharacterized protein E5676_scaffold352G008140 [Cucumis melo var. makuwa])
HSP 1 Score: 308 bits (788), Expect = 1.32e-104
Identity = 151/162 (93.21%), Postives = 154/162 (95.06%), Query Frame = 0
Query: 40 MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES 99
MTKQLKENQEPL+SGG+F A E EESMR ICNPCDFHTPKTYKEVETDQESIGSSEETES
Sbjct: 1 MTKQLKENQEPLVSGGEFPATEAEESMRLICNPCDFHTPKTYKEVETDQESIGSSEETES 60
Query: 100 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNP 159
PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDV NN
Sbjct: 61 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVRDNNN 120
Query: 160 PPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
PPP HSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRA+S
Sbjct: 121 PPP-HSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRAIS 161
BLAST of Cucsat.G13252 vs. NCBI nr
Match:
XP_022934173.1 (uncharacterized protein LOC111441419 [Cucurbita moschata])
HSP 1 Score: 257 bits (657), Expect = 1.07e-84
Identity = 135/165 (81.82%), Postives = 142/165 (86.06%), Query Frame = 0
Query: 40 MTKQLKENQEPLISG---GDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEE 99
MTKQLKENQEP ISG +F AA P ESMRSICNPCDFH+ KT KE ETDQESIGSSEE
Sbjct: 1 MTKQLKENQEPFISGTGEDEFPAAAP-ESMRSICNPCDFHSSKTCKEEETDQESIGSSEE 60
Query: 100 TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH 159
TESPKSVAKVADWRKK+AYVHYQ+RRIREEDLHLGEDIGEGFNAKEKINSIG DWCDV H
Sbjct: 61 TESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIG-DWCDVRH 120
Query: 160 NNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
N PPHS +HN RV SQMNVVIFSRPILPSSPL GKN +R +S
Sbjct: 121 N----PPHS-YHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS 158
BLAST of Cucsat.G13252 vs. NCBI nr
Match:
KAG7017711.1 (hypothetical protein SDJN02_19577, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 257 bits (656), Expect = 1.52e-84
Identity = 134/165 (81.21%), Postives = 142/165 (86.06%), Query Frame = 0
Query: 40 MTKQLKENQEPLISG---GDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEE 99
MTKQLKENQEP ISG +F AA P ESMRSICNPCDFH+ KT KE ETDQESIGSSEE
Sbjct: 1 MTKQLKENQEPFISGTGEDEFPAAAP-ESMRSICNPCDFHSSKTCKEEETDQESIGSSEE 60
Query: 100 TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH 159
TESPKSVAK+ADWRKK+AYVHYQ+RRIREEDLHLGEDIGEGFNAKEKINSIG DWCDV H
Sbjct: 61 TESPKSVAKIADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIG-DWCDVRH 120
Query: 160 NNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
N PPHS +HN RV SQMNVVIFSRPILPSSPL GKN +R +S
Sbjct: 121 N----PPHS-YHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS 158
BLAST of Cucsat.G13252 vs. ExPASy TrEMBL
Match:
A0A0A0LFA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827220 PE=4 SV=1)
HSP 1 Score: 385 bits (990), Expect = 2.29e-135
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query: 18 MHHPCEKEKQNYELNQPEHGVVMTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHT 77
MHHPCEKEKQNYELNQPEHGVVMTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHT
Sbjct: 1 MHHPCEKEKQNYELNQPEHGVVMTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHT 60
Query: 78 PKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEG 137
PKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEG
Sbjct: 61 PKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEG 120
Query: 138 FNAKEKINSIGGDWCDVPHNNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTF 197
FNAKEKINSIGGDWCDVPHNNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTF
Sbjct: 121 FNAKEKINSIGGDWCDVPHNNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTF 180
Query: 198 RALS 201
RALS
Sbjct: 181 RALS 184
BLAST of Cucsat.G13252 vs. ExPASy TrEMBL
Match:
A0A5D3DPQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008140 PE=4 SV=1)
HSP 1 Score: 308 bits (788), Expect = 6.38e-105
Identity = 151/162 (93.21%), Postives = 154/162 (95.06%), Query Frame = 0
Query: 40 MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES 99
MTKQLKENQEPL+SGG+F A E EESMR ICNPCDFHTPKTYKEVETDQESIGSSEETES
Sbjct: 1 MTKQLKENQEPLVSGGEFPATEAEESMRLICNPCDFHTPKTYKEVETDQESIGSSEETES 60
Query: 100 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNP 159
PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDV NN
Sbjct: 61 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVRDNNN 120
Query: 160 PPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
PPP HSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRA+S
Sbjct: 121 PPP-HSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRAIS 161
BLAST of Cucsat.G13252 vs. ExPASy TrEMBL
Match:
A0A1S3B7Y8 (uncharacterized protein LOC103487011 OS=Cucumis melo OX=3656 GN=LOC103487011 PE=4 SV=1)
HSP 1 Score: 308 bits (788), Expect = 6.38e-105
Identity = 151/162 (93.21%), Postives = 154/162 (95.06%), Query Frame = 0
Query: 40 MTKQLKENQEPLISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETES 99
MTKQLKENQEPL+SGG+F A E EESMR ICNPCDFHTPKTYKEVETDQESIGSSEETES
Sbjct: 1 MTKQLKENQEPLVSGGEFPATEAEESMRLICNPCDFHTPKTYKEVETDQESIGSSEETES 60
Query: 100 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNP 159
PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDV NN
Sbjct: 61 PKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVRDNNN 120
Query: 160 PPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
PPP HSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRA+S
Sbjct: 121 PPP-HSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRAIS 161
BLAST of Cucsat.G13252 vs. ExPASy TrEMBL
Match:
A0A6J1F6X8 (uncharacterized protein LOC111441419 OS=Cucurbita moschata OX=3662 GN=LOC111441419 PE=4 SV=1)
HSP 1 Score: 257 bits (657), Expect = 5.20e-85
Identity = 135/165 (81.82%), Postives = 142/165 (86.06%), Query Frame = 0
Query: 40 MTKQLKENQEPLISG---GDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEE 99
MTKQLKENQEP ISG +F AA P ESMRSICNPCDFH+ KT KE ETDQESIGSSEE
Sbjct: 1 MTKQLKENQEPFISGTGEDEFPAAAP-ESMRSICNPCDFHSSKTCKEEETDQESIGSSEE 60
Query: 100 TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH 159
TESPKSVAKVADWRKK+AYVHYQ+RRIREEDLHLGEDIGEGFNAKEKINSIG DWCDV H
Sbjct: 61 TESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIG-DWCDVRH 120
Query: 160 NNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
N PPHS +HN RV SQMNVVIFSRPILPSSPL GKN +R +S
Sbjct: 121 N----PPHS-YHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS 158
BLAST of Cucsat.G13252 vs. ExPASy TrEMBL
Match:
A0A5B7BJ16 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_037709 PE=4 SV=1)
HSP 1 Score: 117 bits (292), Expect = 1.12e-29
Identity = 69/152 (45.39%), Postives = 90/152 (59.21%), Query Frame = 0
Query: 51 LISGGDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEETESPKSVAKVADWR 110
+I G FS E E+ RS + K + E+ETDQESIGSSE+ ESP+S+AKV W
Sbjct: 37 IIEGKKFS--EEREADRSF-----YGKSKVFMELETDQESIGSSEDMESPRSIAKVGQWT 96
Query: 111 -KKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPHNNPPPPPHSSFHN 170
+K+A VH Q+ RIREED HLGEDIGEG +AK+K+ +
Sbjct: 97 TRKIANVHSQILRIREEDSHLGEDIGEGLSAKDKLA-----------------------D 156
Query: 171 HRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 201
H V M+V++ SRPILP+SPLGGK + L+
Sbjct: 157 HHVAPHMDVMLVSRPILPASPLGGKTVIKTLN 158
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_011652239.2 | 4.74e-135 | 100.00 | uncharacterized protein LOC105435002 [Cucumis sativus] | [more] |
| KAE8651222.1 | 5.05e-116 | 100.00 | hypothetical protein Csa_001107 [Cucumis sativus] | [more] |
| XP_008443420.1 | 1.32e-104 | 93.21 | PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo] >KAA0053752.1 unc... | [more] |
| XP_022934173.1 | 1.07e-84 | 81.82 | uncharacterized protein LOC111441419 [Cucurbita moschata] | [more] |
| KAG7017711.1 | 1.52e-84 | 81.21 | hypothetical protein SDJN02_19577, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LFA4 | 2.29e-135 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827220 PE=4 SV=1 | [more] |
| A0A5D3DPQ0 | 6.38e-105 | 93.21 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A1S3B7Y8 | 6.38e-105 | 93.21 | uncharacterized protein LOC103487011 OS=Cucumis melo OX=3656 GN=LOC103487011 PE=... | [more] |
| A0A6J1F6X8 | 5.20e-85 | 81.82 | uncharacterized protein LOC111441419 OS=Cucurbita moschata OX=3662 GN=LOC1114414... | [more] |
| A0A5B7BJ16 | 1.12e-29 | 45.39 | Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_037709 PE=4 SV=1 | [more] |
