Cucsat.G11022 (gene) Cucumber (B10) v3

Overview
NameCucsat.G11022
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptioncell division cycle 48
Locationctg1740: 61835 .. 63432 (+)
RNA-Seq ExpressionCucsat.G11022
SyntenyCucsat.G11022
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATCATATTCAAGCAGAAATTTTAGTACCTGTACCCTGGATTTCCCGAAATGGGTGGAAAAGAAACTTAGATTTGGCTGCCCATTCTCGTCGACCCAATCACTGCAAGCCTTCCAATCATCCATGAGACCTGTCAACACCACAGGTTTGTTCTTCTCCATGTATCGTTCTACAAATTCCTTATAACTCAGTCCTTTCCCATTTACTTTGTCTATTTTTCCACAAATTTCGATACCCATCATTTGCTTTGCTGAAATTTTCGTCTTTCAGAACCGCCGTGGCCGTGAGGACAAGCAAGGAGACTAAAGGTGGAACATCGCCGGTAGCAGCCGTACTTCTGTTTTTCTCGAGCAATGAAATTGGGCTGGGTTAAGTTGGGCCAGGCCCAGATTCAATGGCGGATCCTAACAGAATAAAAGCCGCAATTTGTCAAACGCTTTCTTTTTGGTTTCACCTGCTACTGAAAAATGGCGCCTACTTCACCGATAGCTTTACTTCCATGGCGACCCGCCATTAGTTTCATGTGTAGGTGGAGAGAACTGATTGGTATCAACGTCTTTATGGAAACGGGCTATGTCGGTTGTCCGTCTTCCATACAACAGTGTCATCTATTTTTTATTTCTTCGCATCTTCCTTCTGCATTGCACCGGTGGTCTGAAAACTTGCAGAAACCCTTGTGGTGCTCAAAACACAAAAGACCGAAACGATGACAGACCCAACAGGTTCTTCGGCTTCAGACAAGGGCCAGGAACTCTCTTCTTCATCGGACCAGTAAGTTTTCGTTTAGAATCTTGATTGTTCTTGTTCAGGCCCAGTAATTACCTCTGAATTTTTCTGGTTCTCAAACGGCTAGATAGGTTGATAGAGATTTTAGCTTTATCTTACTTCCATACAAGTGAAAAGTTGGTGCTACATATGTTCCAAAAACTGTTCTGGAAATTTTAGTTTTTCTGCAATTCTTTTTATGAGATGGTTAGGATGGGGGAAGATATTAGCATAATATGTATTGGATTTAGATAAGAGAGAAGATGGAGCTTAAGCACGTTCAGGTACATTAATTTACCTCTGAATTGTGTTGATTTCCGAACCTTTTGTTTGGAAATAGGAACAATACTAAACGGGATTTTTCCACTGCAATTTTGGAACGGAAGAAATCTCCAAATCGCTTAGTTGTTGATGAGGCTATAAATGATGATAACTCTGTCGTTTCATTGCATCCTGCCACCATGGAAAAGTTGCAGTTCTTTAGAGGAGATACTATTTTATTAAAGGTGATGTTCATGCTTGTTTTGGCAGACAGTTTCATCTATCCAGGAGAATGATAATTAGTTTACTTGCATTGTTGTTATTATTATAATAGGGGAAGAAGCGGAGAGATACAGTGTGTATTGTACTTGCCGATGAACAATGCGAAGAGTCAAAAATCAGAATGAATAAAATTGTAAGAGGTAATCTCAGAGTTCGTCTTGGAGACATTGTATCTGTCCATCAGTGTCCTGACGTGAAGTATGGAAATCGGGTTCATATCCTCCCTATTGACGATACAATAGAGGGTGTTACTGGCAACCTCTTTGATGCATATTTGAAACGTGAGGGTTTTGTATTTTAGTTTTACTATCTCCCCTTGATTTTAGATTATAGAATTTCTGGAAAATGATTGGAATCTGATTCTGGTTTTGTTGCTACTCTTGATGTTAGCTTACTTCTTGGAAGCATATCGACCGGTAAGGAAGGGTGACCTGTTCTTAGTCCGGGGTGGAATGAGAAGTGTTGAGTTCAAGGTCATAGAAACGGACCCTGGTGAATACTGTGTTGTTGCACCTGATACCGAGATCTTCTGTGAGGGAGAACCTGTCAAACGTGAGGATGAGGAGAGATTAAACGAAGTTGGATATGATGATGTTGGAGGTGTCAGGAAGCAAATGGCTCAGATACGTGAATTAGTCGAATTACCTCTTAGGCACCCACAACTCTTCAAATCAATTGGTGTAAAGCCTCCAAAAGGGATATTGCTATATGGGCCTCCTGGGTCTGGAAAAACTCTTATAGCAAGAGCTGTTGCTAACGAGACAGGTGCATTCTTCTTTCTTATTAATGGGCCGGAAATAATGTCAAAGTTAGCTGGTGAGAGCGAAAGTAATCTGAGGAAGGCATTTGAGGAAGCTGAAAAGAATGCCCCCTCGATTATATTTATTGATGAGCTTGATTCCATTGCTCCAAAGAGGGAGAAAACGCATGGAGAAGTGGAAAGACGTATTGTGTCCCAACTTCTTACCTTGATGGATGGCCTGAAGACTCGAGCACATGTTATTATTATCGGAGCAACTAATAGACCCAATTCAATTGACCCTGCTTTGAGGAGATTCGGAAGATTTGATCGGGAGATTGATATTGGTGTACCTGATGAAGTAGGACGATTGGAAGTTCTTAGTATCCATACAAAGAACATGAAACTTGCAGAGGATGTGAGATTCTTTCAAATGTTACCTCACATAAATTTTCAGTAAACATATTTTCCATGTAGAACATTTTCTTAAGAAGCTGGTCTTTGTACCAGGTTGATCTTGAGAGAGTTGCAAGGGATACACATGGTTATGTTGGTGCTGACCTAGCCGCTCTTTGCACTGAAGCAGCACTCCAGTGTATTAGGGAGAAAATGGATGTCATCGACTTGGAAGATGAAACAATAGATGCTGAGGTTTTGAATTCCATGGCTGTATCCAATGAACACTTCCAAACTGCTTTAGGGTCTTCTAATCCATCAGCCTTGCGGGAAACTGTGAGTTTGCTTCCTTAATTTTTACTCTGAAAAAACTACTTCCATATCTTGTTAGAGATTGTGGTTAGTTTGGCGTAAAATTGCCTCTAGTGTTGTGTTCCTTTTCAACTGACTAAACTGTCGTAAAAACTTCAAAAGTTGCCTTTTGCTTTTAGGTTGTGGAGGTTCCAAATGTGTCGTGGGATGATATTGGTGGGTTGGAAAACGTTAAAAGAGAGCTCCAGGAGGTTTGTGCCCTGTTTTATATTTTGAAGTTATAATTTTAAGCTTTTGCCTCAGTTTTTTTTCCCTCGCCAAACTCATCTCCGTTTGGTTGTTTTGTGGCAGACTGTCCAATACCCAGTGGAGCATCCTGAGAAGTTTGAAAAATTCGGCATGTCACCATCTAAAGGTGTTCTCTTTTATGGTCCCCCTGGCTGTGGTAAAACGCTACTTGCTAAGGCAATTGCCAATGAATGCCAGGCAAACTTTATAAGTGTGAAAGGACCGGAGTTGCTGACAATGTGGTTTGGTGAAAGTGAGGCAAACGTGAGAGAGATATTTGACAAGGCTCGTCAGTCAGCTCCTTGTGTACTATTTTTTGATGAGCTCGATTCTATAGCAACTCAGGTTCTAAGTCTTCAAGCTTCAACATATAGTCGACCAATTCTTATTTCTTATCAATTTTTTTACAATTAATCACTCTTTTTATTTTAAAAGTATGCATATGTGTGTGTGTGTATGTATATATATGTATGTGTATGTATATGCATATGTATATACATATACGAATGTTCATATGTGAGTGAATTTCAGATTTTTTATATATACAAAAGATATGATAAATTGGTTTAATTTTCACAGCGTGGTAGTTCTGTTGGAGATGCTGGTGGTGCAGCAGACAGAGTCTTGAACCAACTTCTTACAGAAATGGATGGCATGACTGCAAAGAAGACTGTGTTCATAATTGGGGCAACAAACAGGCCAGACATTATCGACCCCGCACTGCTAAGGCCGGGACGTCTAGACCAATTAATATACATTCCGCTCCCTGACGAGTCTTCTCGTCTTCAAATCTTCAAAGCTTGTCTGCGAAAGTCACCAGTGGCGAAAGATGTCAATCTGTCAGCTCTTGCAGGGTATACCCATGGCTTCAGTGGAGCTGATATCACTGAAATATGTCAGCGTGCCTGCAAATATGCCATTAGAGAAAATATCGAGAAGGTACGTCTTTACCAAAAATGTTGTACTACAGTTTGATGTGGCAGCAACTTTGACTCTGAGTGAACATCCTTTACTTGAATTTCTTGTCCATTAAAAGAACCATGCTTTAGAAGATTGGTGAAATGATTGGAATCATGTTCGATAACCATTTTGTTTTTTTGTTTTTTTGTTTTCTATTTATGAAAATTATGCTTGTTTCCTCCCATTTTTTAGGGAAGCTTTTCATTCCACTTAAAAACACGAGTTTAGTTTGGCTTTTGAAAAACATTTTCAAAATTTAGATAATTTTATCGGTAGAAGTAGTGTTTATAAGCTTAATTTTCAAACATGCAAAAAGTAAGGATAACAAATTCTTAAGAGAACTGTGGTACTTCTGATGTTACGTCATCCGTGTGATGATCTTTCTAACCAACTCTCTTTAAAAGTTCTTTCGCTGACTTTATAAAGTGTTTGCTTCTTTTACTCACAAATAATTTCATTTCTTTCATTTTGACCCAATTATATTTTCCCTATTTTTCTTCATCCGCATACTGTTTATCTGACTGACCCTTATCATTGCTGCCTAACCAATAGCAGACCAGCCATTCCTTCATCTCTTTTCAACTGATGAGGCCAAAGCTGAAAATAGAAAACAAATGAAGAAACTACAATCTGAAATAAATATAGTACCTACAAGAAAGACCTACATTTTTTTTCATGGAAAGATTTAGCACTCTTCAGTGACAAGCTTGATAATAAAGGTCCTCGTGAAATGAGAAACCATGTTCATTCACTGTGGCTGCCTAAAGCCTTTTTTTTTTCTCTGAAGATGTCTTTTCCCTTCCATGAAAACTGAAACCAACGTACTTTTCTTAAAAGTTAGCATTTACACTAACTTCTTGACTACTTTTTCTTGAACTAATTGTTATCTGCCAAACACTTTCTTTCTTTAGCCTGTGCTGGTTAGAGTTCTTGACTATCTTTGCTTAAACTAGTCAGCATCTATACTAAATGTCATGGATTGGAAAGGTGATTCTTTTTTAGTTTTGCTTTCTTGCCTTCTTCATTTTATGTTTAGTGATATCTGCTCATTGAGATATGAAATTCCCAACACCAGATGGATGTTATAAATTTATATTGCCTCATTATTTTAAGAATTTACTTCTATGGAACTATACATATTTACTACAATCTGTTAACTTGTTTTTATCCACGAAATGGGTGTTAGGATCTCGAAAGGGAGAGAAAGCAGGGTGAAAACTCAGAAGCCATGGAAGAAGACGAGATCGATGATGTCTCAGAGATTAAGGCAGCACATTTTGAGGAATCAATGAAGTATGCTCGCCGAAGTGTGAGCGATGCAGACATCAGGAAGTATCAGCTCTTTGCTCAGACCCTACAGCAATCTCGTGGAATTGGTTCTGAGTTTCGGTTCCCTGATCGAAACGACAATGTGGCAGCAGGAGCTGCCGACCCCTATGCTTCCACCATGGGTGCTGGAGATGATGATGATCTTTATAGCTGAAGTGAAAACCATCCAGGGCAGTAGTTCGTTTGGTTTTTCTTCTGTAAACGAGCTTTTAGTGCTTTTTATGGGTTTCCTTCTCTTGAAATGTAGTTGTTAAGTGAAGAAGACTTGTGTTGTTGTAGACACTTCCTTAGAAAGGTCTTTCTATGTAAATAAGGGAATATGGAACACATCATGACTTCCGAGTAGACATCTCTTGGTTCTGAAATCTGGAAATAAAATTAAACGCAGTAACAAATTTGAAAGGAAAAAAAGAAAAAATAAAACAGTACATACTTAAAAGTTATAA

Coding sequence (CDS)

ATGTTAGCTTACTTCTTGGAAGCATATCGACCGGTAAGGAAGGGTGACCTGTTCTTAGTCCGGGGTGGAATGAGAAGTGTTGAGTTCAAGGTCATAGAAACGGACCCTGGTGAATACTGTGTTGTTGCACCTGATACCGAGATCTTCTGTGAGGGAGAACCTGTCAAACGTGAGGATGAGGAGAGATTAAACGAAGTTGGATATGATGATGTTGGAGGTGTCAGGAAGCAAATGGCTCAGATACGTGAATTAGTCGAATTACCTCTTAGGCACCCACAACTCTTCAAATCAATTGGTGTAAAGCCTCCAAAAGGGATATTGCTATATGGGCCTCCTGGGTCTGGAAAAACTCTTATAGCAAGAGCTGTTGCTAACGAGACAGGTGCATTCTTCTTTCTTATTAATGGGCCGGAAATAATGTCAAAGTTAGCTGGTGAGAGCGAAAGTAATCTGAGGAAGGCATTTGAGGAAGCTGAAAAGAATGCCCCCTCGATTATATTTATTGATGAGCTTGATTCCATTGCTCCAAAGAGGGAGAAAACGCATGGAGAAGTGGAAAGACGTATTGTGTCCCAACTTCTTACCTTGATGGATGGCCTGAAGACTCGAGCACATGTTATTATTATCGGAGCAACTAATAGACCCAATTCAATTGACCCTGCTTTGAGGAGATTCGGAAGATTTGATCGGGAGATTGATATTGGTGTACCTGATGAAGTAGGACGATTGGAAGTTCTTAGTATCCATACAAAGAACATGAAACTTGCAGAGGATGTTGATCTTGAGAGAGTTGCAAGGGATACACATGGTTATGTTGGTGCTGACCTAGCCGCTCTTTGCACTGAAGCAGCACTCCAGTGTATTAGGGAGAAAATGGATGTCATCGACTTGGAAGATGAAACAATAGATGCTGAGGTTTTGAATTCCATGGCTGTATCCAATGAACACTTCCAAACTGCTTTAGGGTCTTCTAATCCATCAGCCTTGCGGGAAACTGTTGTGGAGGTTCCAAATGTGTCGTGGGATGATATTGGTGGGTTGGAAAACGTTAAAAGAGAGCTCCAGGAGACTGTCCAATACCCAGTGGAGCATCCTGAGAAGTTTGAAAAATTCGGCATGTCACCATCTAAAGGTGTTCTCTTTTATGGTCCCCCTGGCTGTGGTAAAACGCTACTTGCTAAGGCAATTGCCAATGAATGCCAGGCAAACTTTATAAGTGTGAAAGGACCGGAGTTGCTGACAATGTGGTTTGGTGAAAGTGAGGCAAACGTGAGAGAGATATTTGACAAGGCTCGTCAGTCAGCTCCTTGTGTACTATTTTTTGATGAGCTCGATTCTATAGCAACTCAGCGTGGTAGTTCTGTTGGAGATGCTGGTGGTGCAGCAGACAGAGTCTTGAACCAACTTCTTACAGAAATGGATGGCATGACTGCAAAGAAGACTGTGTTCATAATTGGGGCAACAAACAGGCCAGACATTATCGACCCCGCACTGCTAAGGCCGGGACGTCTAGACCAATTAATATACATTCCGCTCCCTGACGAGTCTTCTCGTCTTCAAATCTTCAAAGCTTGTCTGCGAAAGTCACCAGTGGCGAAAGATGTCAATCTGTCAGCTCTTGCAGGGTATACCCATGGCTTCAGTGGAGCTGATATCACTGAAATATGTCAGCGTGCCTGCAAATATGCCATTAGAGAAAATATCGAGAAGGATCTCGAAAGGGAGAGAAAGCAGGGTGAAAACTCAGAAGCCATGGAAGAAGACGAGATCGATGATGTCTCAGAGATTAAGGCAGCACATTTTGAGGAATCAATGAAGTATGCTCGCCGAAGTGTGAGCGATGCAGACATCAGGAAGTATCAGCTCTTTGCTCAGACCCTACAGCAATCTCGTGGAATTGGTTCTGAGTTTCGGTTCCCTGATCGAAACGACAATGTGGCAGCAGGAGCTGCCGACCCCTATGCTTCCACCATGGGTGCTGGAGATGATGATGATCTTTATAGCTGA

Protein sequence

MLAYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIIIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLSIHTKNMKLAEDVDLERVARDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQTALGSSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDESSRLQIFKACLRKSPVAKDVNLSALAGYTHGFSGADITEICQRACKYAIRENIEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS
Homology
[Close]
BLAST of Cucsat.G11022 vs. ExPASy Swiss-Prot
Match: P54774 (Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.5e-31
Identity = 73/102 (71.57%), Postives = 84/102 (82.35%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDD-VSEIKAAHFEESMKYARRSVSDADIRKYQLFAQT 63
           I KD+ERERK  EN EAM+ED +DD V+EIKAAHFEESMK+ARRSVSDADIRKYQ FAQT
Sbjct: 707 IEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQT 766

Query: 64  LQQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 105
           LQQSRG GSEFRFP+  D    G +DP+A++ G  D+DDLYS
Sbjct: 767 LQQSRGFGSEFRFPESGDRTTTG-SDPFAASAGGADEDDLYS 807

[Close]
BLAST of Cucsat.G11022 vs. ExPASy Swiss-Prot
Match: P54609 (Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CDC48A PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 7.3e-31
Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KD+E+E+++ EN EAMEED +D+VSEIKAAHFEESMKYARRSVSDADIRKYQ FAQTL
Sbjct: 707 IEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTL 766

Query: 64  QQSRGIGSEFRFPD-RNDNVAAGAADPYA-STMGAGDDDDLYS 105
           QQSRG GSEFRF +        G ADP+A S   AGDDDDLY+
Sbjct: 767 QQSRGFGSEFRFENSAGSGATTGVADPFATSAAAAGDDDDLYN 809

[Close]
BLAST of Cucsat.G11022 vs. ExPASy Swiss-Prot
Match: Q9SCN8 (Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CDC48D PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-29
Identity = 72/110 (65.45%), Postives = 83/110 (75.45%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KD+E+ERK+ E+ EAMEEDE ++++EIKA HFEESMKYARRSVSDADIRKYQ FAQTL
Sbjct: 707 IEKDIEKERKRAESPEAMEEDE-EEIAEIKAGHFEESMKYARRSVSDADIRKYQAFAQTL 766

Query: 64  QQSRGIGSEFRFPDRNDN---------VAAGAADPYASTMGAGDDDDLYS 105
           QQSRG GSEFRFPD                G  DP+A++ GA DDDDLYS
Sbjct: 767 QQSRGFGSEFRFPDAPTGTTGAFPGAAATVGGVDPFATSGGAADDDDLYS 815

[Close]
BLAST of Cucsat.G11022 vs. ExPASy Swiss-Prot
Match: Q9LZF6 (Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CDC48E PE=2 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 2.3e-29
Identity = 72/105 (68.57%), Postives = 81/105 (77.14%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDD-VSEIKAAHFEESMKYARRSVSDADIRKYQLFAQT 63
           I KD+E ER++ +N EAMEED +DD VSEI+AAHFEESMKYARRSVSDADIRKYQ FAQT
Sbjct: 706 IEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQT 765

Query: 64  LQQSRGIGSEFRFPDR---NDNVAAGAADPYASTMGAGDDDDLYS 105
           LQQSRG GSEFRF             AADP+A++  A DDDDLYS
Sbjct: 766 LQQSRGFGSEFRFDSTAGVGRTTGVAAADPFATSAAAADDDDLYS 810

[Close]
BLAST of Cucsat.G11022 vs. ExPASy Swiss-Prot
Match: Q96372 (Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.8e-29
Identity = 69/101 (68.32%), Postives = 83/101 (82.18%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KD+ERE+++ EN ++M+ED +D+V EIK AHFEESMKYARRSVSDADIRKYQ FAQTL
Sbjct: 707 IEKDIEREKRRQENPDSMDED-VDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTL 766

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 105
           QQSRG G+EFRF D +   A  AADP+A++  A DDDDLYS
Sbjct: 767 QQSRGFGTEFRFADTSGG-ATAAADPFATSNAAADDDDLYS 805

[Close]
BLAST of Cucsat.G11022 vs. NCBI nr
Match: XP_031740129.1 (cell division cycle protein 48 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 192 bits (489), Expect = 6.82e-55
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL
Sbjct: 708 IEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 767

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 104
           QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS
Sbjct: 768 QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 808

[Close]
BLAST of Cucsat.G11022 vs. NCBI nr
Match: XP_004138100.1 (cell division cycle protein 48 homolog isoform X1 [Cucumis sativus] >KGN63558.1 hypothetical protein Csa_013114 [Cucumis sativus])

HSP 1 Score: 192 bits (489), Expect = 7.43e-55
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL
Sbjct: 719 IEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 778

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 104
           QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS
Sbjct: 779 QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 819

[Close]
BLAST of Cucsat.G11022 vs. NCBI nr
Match: XP_008464542.1 (PREDICTED: cell division cycle protein 48 homolog [Cucumis melo])

HSP 1 Score: 188 bits (478), Expect = 2.61e-53
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMK+ARRSVSDADIRKYQLFAQTL
Sbjct: 719 IEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKFARRSVSDADIRKYQLFAQTL 778

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLY 103
           QQSRGIGSEFRFPDRNDNVAAG+ADPYASTMGAGDDDDLY
Sbjct: 779 QQSRGIGSEFRFPDRNDNVAAGSADPYASTMGAGDDDDLY 818

[Close]
BLAST of Cucsat.G11022 vs. NCBI nr
Match: KAA0057838.1 (cell division cycle protein 48-like protein [Cucumis melo var. makuwa] >TYJ98522.1 cell division cycle protein 48-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (478), Expect = 4.37e-53
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMK+ARRSVSDADIRKYQLFAQTL
Sbjct: 813 IEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKFARRSVSDADIRKYQLFAQTL 872

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLY 103
           QQSRGIGSEFRFPDRNDNVAAG+ADPYASTMGAGDDDDLY
Sbjct: 873 QQSRGIGSEFRFPDRNDNVAAGSADPYASTMGAGDDDDLY 912

[Close]
BLAST of Cucsat.G11022 vs. NCBI nr
Match: XP_038879488.1 (cell division cycle protein 48 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 174 bits (442), Expect = 1.90e-48
Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGEN EAMEED+IDDVSEIKAAHFEESMKYARRSVSD+DIRKYQLFAQTL
Sbjct: 657 IEKDLERERKQGENLEAMEEDDIDDVSEIKAAHFEESMKYARRSVSDSDIRKYQLFAQTL 716

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 104
           QQSRGIGSEFRFPDR +N AAGAADP+ASTMGAGDDD LYS
Sbjct: 717 QQSRGIGSEFRFPDRTENAAAGAADPFASTMGAGDDD-LYS 756

[Close]
BLAST of Cucsat.G11022 vs. ExPASy TrEMBL
Match: A0A0A0LP36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004250 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 3.60e-55
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL
Sbjct: 719 IEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 778

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 104
           QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS
Sbjct: 779 QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 819

[Close]
BLAST of Cucsat.G11022 vs. ExPASy TrEMBL
Match: A0A1S3CLQ4 (cell division cycle protein 48 homolog OS=Cucumis melo OX=3656 GN=LOC103502393 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.27e-53
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMK+ARRSVSDADIRKYQLFAQTL
Sbjct: 719 IEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKFARRSVSDADIRKYQLFAQTL 778

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLY 103
           QQSRGIGSEFRFPDRNDNVAAG+ADPYASTMGAGDDDDLY
Sbjct: 779 QQSRGIGSEFRFPDRNDNVAAGSADPYASTMGAGDDDDLY 818

[Close]
BLAST of Cucsat.G11022 vs. ExPASy TrEMBL
Match: A0A5A7URQ0 (Cell division cycle protein 48-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001270 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 2.12e-53
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMK+ARRSVSDADIRKYQLFAQTL
Sbjct: 813 IEKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKFARRSVSDADIRKYQLFAQTL 872

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLY 103
           QQSRGIGSEFRFPDRNDNVAAG+ADPYASTMGAGDDDDLY
Sbjct: 873 QQSRGIGSEFRFPDRNDNVAAGSADPYASTMGAGDDDDLY 912

[Close]
BLAST of Cucsat.G11022 vs. ExPASy TrEMBL
Match: A0A6J1EMV1 (cell division cycle protein 48 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436026 PE=4 SV=1)

HSP 1 Score: 171 bits (432), Expect = 3.29e-47
Identity = 88/101 (87.13%), Postives = 93/101 (92.08%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERK  EN EAMEED+ID+VSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL
Sbjct: 720 IEKDLERERKMRENPEAMEEDDIDEVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 779

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 104
           QQSRGIGSEFRFPDR DNV AGAADP++S + AGDDDDLYS
Sbjct: 780 QQSRGIGSEFRFPDRTDNVTAGAADPFSSAVAAGDDDDLYS 820

[Close]
BLAST of Cucsat.G11022 vs. ExPASy TrEMBL
Match: A0A6J1KR99 (cell division cycle protein 48 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496494 PE=4 SV=1)

HSP 1 Score: 168 bits (426), Expect = 2.22e-46
Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0 

Query: 4   IGKDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 63
           I KDLERERK+ EN EAMEED+ID+VSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL
Sbjct: 720 IEKDLERERKERENPEAMEEDDIDEVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTL 779

Query: 64  QQSRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS 104
           QQSRGI SEFRFPDR DNV AGAADP++S + AGDDDDLYS
Sbjct: 780 QQSRGIRSEFRFPDRTDNVTAGAADPFSSAVAAGDDDDLYS 820

The following BLAST results are available for this feature:
BLAST of Cucsat.G11022 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P547741.5e-3171.57Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1[more]
P546097.3e-3170.87Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CD... [more]
Q9SCN81.4e-2965.45Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CD... [more]
Q9LZF62.3e-2968.57Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CD... [more]
Q963726.8e-2968.32Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 S... [more]
BLAST of Cucsat.G11022 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740129.16.82e-5599.01cell division cycle protein 48 homolog isoform X2 [Cucumis sativus][more]
XP_004138100.17.43e-5599.01cell division cycle protein 48 homolog isoform X1 [Cucumis sativus] >KGN63558.1 ... [more]
XP_008464542.12.61e-5397.00PREDICTED: cell division cycle protein 48 homolog [Cucumis melo][more]
KAA0057838.14.37e-5397.00cell division cycle protein 48-like protein [Cucumis melo var. makuwa] >TYJ98522... [more]
XP_038879488.11.90e-4891.09cell division cycle protein 48 homolog isoform X2 [Benincasa hispida][more]
BLAST of Cucsat.G11022 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP363.60e-5599.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004250 PE=4 SV=1[more]
A0A1S3CLQ41.27e-5397.00cell division cycle protein 48 homolog OS=Cucumis melo OX=3656 GN=LOC103502393 P... [more]
A0A5A7URQ02.12e-5397.00Cell division cycle protein 48-like protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1EMV13.29e-4787.13cell division cycle protein 48 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1KR992.22e-4686.14cell division cycle protein 48 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114964... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 153..289
e-value: 7.3E-25
score: 98.6
IPR004201CDC48, domain 2SMARTSM01072CDC48_2_2coord: 42..108
e-value: 7.3E-16
score: 68.7
IPR004201CDC48, domain 2PFAMPF02933CDC48_2coord: 44..107
e-value: 4.9E-13
score: 48.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 116..287
e-value: 1.9E-80
score: 272.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 118..310
NoneNo IPR availableGENE3D1.10.8.60coord: 288..314
e-value: 1.9E-80
score: 272.1
NoneNo IPR availableGENE3D3.10.330.10coord: 25..109
e-value: 4.3E-42
score: 144.2
NoneNo IPR availableGENE3D2.40.40.20coord: 1..24
e-value: 9.2E-7
score: 30.2
NoneNo IPR availablePANTHERPTHR23077AAA-FAMILY ATPASEcoord: 1..312
NoneNo IPR availablePANTHERPTHR23077:SF161CELL DIVISION CONTROL PROTEIN 48 HOMOLOG Ecoord: 1..312
NoneNo IPR availableCDDcd00009AAAcoord: 152..286
e-value: 1.05219E-31
score: 114.165
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 157..286
e-value: 4.2E-48
score: 163.1
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 257..275
IPR029067CDC48 domain 2-like superfamilySUPERFAMILY54585Cdc48 domain 2-likecoord: 24..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G11022.T18Cucsat.G11022.T18mRNA
Cucsat.G11022.T16Cucsat.G11022.T16mRNA
Cucsat.G11022.T14Cucsat.G11022.T14mRNA
Cucsat.G11022.T15Cucsat.G11022.T15mRNA
Cucsat.G11022.T12Cucsat.G11022.T12mRNA
Cucsat.G11022.T10Cucsat.G11022.T10mRNA
Cucsat.G11022.T8Cucsat.G11022.T8mRNA
Cucsat.G11022.T4Cucsat.G11022.T4mRNA
Cucsat.G11022.T5Cucsat.G11022.T5mRNA
Cucsat.G11022.T6Cucsat.G11022.T6mRNA
Cucsat.G11022.T7Cucsat.G11022.T7mRNA
Cucsat.G11022.T1Cucsat.G11022.T1mRNA
Cucsat.G11022.T2Cucsat.G11022.T2mRNA
Cucsat.G11022.T3Cucsat.G11022.T3mRNA
Cucsat.G11022.T26Cucsat.G11022.T26mRNA
Cucsat.G11022.T25Cucsat.G11022.T25mRNA
Cucsat.G11022.T24Cucsat.G11022.T24mRNA
Cucsat.G11022.T28Cucsat.G11022.T28mRNA
Cucsat.G11022.T13Cucsat.G11022.T13mRNA
Cucsat.G11022.T23Cucsat.G11022.T23mRNA
Cucsat.G11022.T11Cucsat.G11022.T11mRNA
Cucsat.G11022.T21Cucsat.G11022.T21mRNA
Cucsat.G11022.T20Cucsat.G11022.T20mRNA
Cucsat.G11022.T19Cucsat.G11022.T19mRNA
Cucsat.G11022.T17Cucsat.G11022.T17mRNA
Cucsat.G11022.T9Cucsat.G11022.T9mRNA
Cucsat.G11022.T22Cucsat.G11022.T22mRNA
Cucsat.G11022.T27Cucsat.G11022.T27mRNA
Cucsat.G11022.T29Cucsat.G11022.T29mRNA
Cucsat.G11022.T30Cucsat.G11022.T30mRNA
Cucsat.G11022.T31Cucsat.G11022.T31mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0097352 autophagosome maturation
biological_process GO:0051301 cell division
biological_process GO:0071712 ER-associated misfolded protein catabolic process
biological_process GO:0051228 mitotic spindle disassembly
biological_process GO:0030970 retrograde protein transport, ER to cytosol
biological_process GO:0030433 ubiquitin-dependent ERAD pathway
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0031593 polyubiquitin modification-dependent protein binding
molecular_function GO:0016787 hydrolase activity