Cucsat.G10662 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATTCTGTCTTCTCCACCTTATCCTTCTCGTCACCTCTTGCCTGCCTGCAAGTCACTGTGTCATCTTCTTCGTAATCGGACCCAAAGGGGGTCTCTCTCGCTCTTTCACACTTGGGTGTTCTGTTCTCACACTCATAATGGCACTCTCTTCTCCTCCTTCTCTTCAACCTCCAACTTCGATACACTCACCTAAGTAAGTTCTTGTGTTTTTTTCTTTTTTTTTTTCTTTTCTAAATATATGAATTCGTGATAATTCGTGCCTACATTTCTGGCTATTTAGCTGACTTAATTTGAGGATGTCTGTCTAGACCTCAGGAAAATCTTTGGGAGACTCATTTTCAGGGTTCAGGGTATATATATGATTTACGTGTACCGGGAATTTTCTTAATTGTTCCTTTTTTCACATTCAGAGAGCTTCTTGAAACGCATCGGTTGATTTTGGGGTTGTTGGGGTTGTGTGTCTTCCATTTTGGTCTAATGATGAATTAGTTATATCTATAATTTCTTTGTTGAATTTTTTCAAGTATGTAGCCATTCCACCAAGACGTTGACAACAAACCTTGAAATTTCAATGATTCTATTGCACGTAGTTCAGATTGAATGTTGAGTTCGCTTTTAGATTAAATTTATCTTACTTCGACAATGTGAAATAGGGGAAGAATGACATCTCCATATTGATTAGTTTTGTGGCTTCTCCCTTTGAGAACATACATCCAAGTATAATTGGGGTGGGCCTTAAGGATAAGGTGAAAGAAAATTGTCATACCCCCTCCTGAACTACCTACTAGCTTAGCTCGGATGACGGCATGATGCCGACTGACATCGTTCTCCTCCAACGATACTTGCCGACTCCGCTGAACTCTTGAACCTGATAAACATTCTAATCTTATATATATAATACTTTACGTGCAACACTAAACCTAGATAACCCATAAACATACATTAAGTGCAACCCTGAAATAATTCACTCCTTTAGAAAATAAACATGATAAAAACATTATAACCAAACGCATATCCATCCAGGATTTACACAACCATAACACCTAGAGCTTACACAAACTGTAAATCAATATTGAGTAAGTTGTTTTTTTAATTACTAATGTCTTGTTTGATAACCATTTGGTTTTTATAAATACTGCTTCTACTATTACGTTTCTGCGTTTGTTATGTACTTTCAATTCATGTTTACAAAAACCAAGTCAAGTTCAGAAAACAAAAGGCATCAATCTAGAGAATTGTTTAAAAGAGTGAATTTTTTTTCCGCTGGTCATGATGCCATGAAGGTGTAGATATGGTAGATAGAATTTAGATTAAGTATCATACCAGGGTCCTTAAATCTAGTTTTGTTTTTATGTTGTCTTAACATTGTAGTTGTTGGTAAAAAAATATTCCTCTGTCTGCCCTTTCCAGTTAGGAGGTTTCAGTCCTCTTCTGTTTGAATATGTGTAGAGCTTCTGTTACACTGGCCTTTGGGTTGATTTTTGTGTGTTTGAACCTTTAGCCATCACTAACAATGGCCATCTACACAATATCCTTTCTTTTATGTGACTGGCTCTTTGCATTTAGAGAGTTATCAAGAAATTAGAATTGTGGACATTTCTTGAACATGGAGTGAGTCTATTGGAAAATTTTTCTCACTCGATTGATTTACTGAGTAGAGCTTGTAAGGGATGCCCTTGAATTAATGTTCTCAAGCAAGTAAGCTTATGGAGTGTATAAAGCCAGGCCTTAGATGATGGATAACAATGGTTTGAGCTCCTTGAAGAAAAGTCTTATTACTAGAAAAAAAGAATAAGAAACTATTTCATAAACACATTAGTCAGTTGCCAACATGAGCATAACACTACCTCCAGAAGTTCAAATCCTCATATGCACGTTTGTTGTTCTCGAAAAAGCATCATAGTAGGTTTCATTTTTTCCTAGGACTGGGATGTTCAATATTTATCCAGTTGAGCCACAAATGATTTAAGACTTGTGTTGTATGTTTGATACGAAGGAAAAAAAGATCAATTTTCTTTATCTATACTCCTTTTGTTTCAACATCATTTTCTTTTTTGTATTTAGGGGATGGTTATATATATATATTTACACACGTTCATTGTTTGTGTTGTTGTCTACTGAAACCATTTTCCTCATTGTATCTCAGCAACTTTCGGTCTACATTTTTGGGAGAAAAAAATGGATTCTGTGTTTCTGCAATGCCTGCATGTCATATTGGTCTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAGTGTAACCATCACATTGCAGGGTCAGGATTTGAAAGTTAAGGGTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAGGTTAAAATTGAGAGGGAAGATTCTGGGATCATAAGAGTTAAGAAAGCACTGGAGACAAGAAGAGCCAATCAAATGCATGGACTTTTCAGGTATTCTCATCATGGATTTCACTTTTCTTCCTCTTTAAGTTTTACTTGGACGGTATAATATAAAGTTTACCTTCACCTATCAGCTTAAGCTTTTGAGTTATTTGGAGATAGTTTACACGGGTCACTTGCTTTTATGTCTTTTCAAATTCTGAAAATCCAAAGATGACTTCATGTTATGAATGCAAACAACCAGCCCTTTGTTCCTTATGAAATTCAAATGAATTATGGCTGATGGAGAAAGAGTAAATGTGTAGGCATGGTGTCATATATGACCATTTGAATTGATTTCCTCAGGACGCTTACAGACAACATGGTGGTAGGAGTATCGAAGGGGTTCGAAAAGAAACTTCAATTGATCGGTGTCGGTTATCGAGCAATGGTAGAAGGAAAAGACTTGGTACTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCGATACCTGATGGGATTCAGATAAAAGTGGAAGAAAACACAAGAATTACAGTAAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAGTGGAGACCCCCAGAACCTTACAAGGGTAAAGGAGTGAAATATGCTGATGAAATCGTAAGAAGAAAAGAAGGAAAAGCAGGGAAGAAGAAGTAATGGCTTTGTAAAATTCATTGTTGGTTTTTTATTCTCTTTTTGAAATATTTGTATTTTTTTTTTCTATTATCAGAAAGGATTATTGTCACATTACTGTTTGACTTCCATTGAATGTGAAAATTTGCTAGAATTCACACCGTAAAATCTTTTACAAAAATGACTTTGTTTTTTTTCTAGGTTGAAAAAGAAAAAAACTGTGAAATTTCTTTCCCC TTCTGTCTTCTCCACCTTATCCTTCTCGTCACCTCTTGCCTGCCTGCAAGTCACTGTGTCATCTTCTTCGTAATCGGACCCAAAGGGGGTCTCTCTCGCTCTTTCACACTTGGGTGTTCTGTTCTCACACTCATAATGGCACTCTCTTCTCCTCCTTCTCTTCAACCTCCAACTTCGATACACTCACCTAACAACTTTCGGTCTACATTTTTGGGAGAAAAAAATGGATTCTGTGTTTCTGCAATGCCTGCATGTCATATTGGTCTGTTGAGGAAGACTATAGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAGTGTAACCATCACATTGCAGGGTCAGGATTTGAAAGTTAAGGGTCCTTTAGGAGAACTTTCAATTCTTTATCCACGAGAGGTTAAAATTGAGAGGGAAGATTCTGGGATCATAAGAGTTAAGAAAGCACTGGAGACAAGAAGAGCCAATCAAATGCATGGACTTTTCAGGACGCTTACAGACAACATGGTGGTAGGAGTATCGAAGGGGTTCGAAAAGAAACTTCAATTGATCGGTGTCGGTTATCGAGCAATGGTAGAAGGAAAAGACTTGGTACTAAATCTTGGGTTCTCTCATCCAGTTAGAATGGCGATACCTGATGGGATTCAGATAAAAGTGGAAGAAAACACAAGAATTACAGTAAGTGGATATGATAAATGTGCCATTGGTCAGTTTGCTGCCTCTATTAGACAGTGGAGACCCCCAGAACCTTACAAGGGTAAAGGAGTGAAATATGCTGATGAAATCGTAAGAAGAAAAGAAGGAAAAGCAGGGAAGAAGAAGTAA FCLLHLILLVTSCLPASHCVIFFVIGPKGGLSRSFTLGCSVLTLIMALSSPPSLQPPTSIHSPNNFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKKK Homology
BLAST of Cucsat.G10662 vs. ExPASy Swiss-Prot
Match: O23049 (50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL6 PE=2 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.1e-93 Identity = 171/233 (73.39%), Postives = 196/233 (84.12%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy Swiss-Prot
Match: P82193 (50S ribosomal protein L6, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL6 PE=1 SV=2) HSP 1 Score: 335.1 bits (858), Expect = 7.5e-91 Identity = 161/220 (73.18%), Postives = 191/220 (86.82%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy Swiss-Prot
Match: B0C1E7 (50S ribosomal protein L6 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=rplF PE=3 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 9.0e-52 Identity = 105/179 (58.66%), Postives = 133/179 (74.30%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy Swiss-Prot
Match: Q8YPJ3 (50S ribosomal protein L6 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rplF PE=3 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.7e-50 Identity = 99/178 (55.62%), Postives = 130/178 (73.03%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy Swiss-Prot
Match: B7KI01 (50S ribosomal protein L6 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=rplF PE=3 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 2.2e-50 Identity = 99/179 (55.31%), Postives = 127/179 (70.95%), Query Frame = 0
BLAST of Cucsat.G10662 vs. NCBI nr
Match: XP_004144493.1 (50S ribosomal protein L6, chloroplastic [Cucumis sativus] >KGN43529.1 hypothetical protein Csa_020508 [Cucumis sativus]) HSP 1 Score: 462 bits (1190), Expect = 1.98e-163 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Cucsat.G10662 vs. NCBI nr
Match: XP_008455431.1 (PREDICTED: 50S ribosomal protein L6, chloroplastic [Cucumis melo]) HSP 1 Score: 456 bits (1173), Expect = 7.73e-161 Identity = 229/233 (98.28%), Postives = 231/233 (99.14%), Query Frame = 0
BLAST of Cucsat.G10662 vs. NCBI nr
Match: XP_038888704.1 (50S ribosomal protein L6, chloroplastic [Benincasa hispida]) HSP 1 Score: 432 bits (1112), Expect = 1.52e-151 Identity = 214/233 (91.85%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of Cucsat.G10662 vs. NCBI nr
Match: XP_022952947.1 (50S ribosomal protein L6, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 409 bits (1051), Expect = 2.78e-142 Identity = 207/233 (88.84%), Postives = 218/233 (93.56%), Query Frame = 0
BLAST of Cucsat.G10662 vs. NCBI nr
Match: KAG6572299.1 (50S ribosomal protein L6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 409 bits (1050), Expect = 3.94e-142 Identity = 206/233 (88.41%), Postives = 218/233 (93.56%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy TrEMBL
Match: A0A0A0K3K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044200 PE=3 SV=1) HSP 1 Score: 462 bits (1190), Expect = 9.60e-164 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy TrEMBL
Match: A0A1S3C0W5 (50S ribosomal protein L6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495590 PE=3 SV=1) HSP 1 Score: 456 bits (1173), Expect = 3.74e-161 Identity = 229/233 (98.28%), Postives = 231/233 (99.14%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy TrEMBL
Match: A0A6J1GLT4 (50S ribosomal protein L6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455470 PE=3 SV=1) HSP 1 Score: 409 bits (1051), Expect = 1.34e-142 Identity = 207/233 (88.84%), Postives = 218/233 (93.56%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy TrEMBL
Match: A0A6J1HVU0 (50S ribosomal protein L6, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468304 PE=3 SV=1) HSP 1 Score: 405 bits (1041), Expect = 4.48e-141 Identity = 205/233 (87.98%), Postives = 217/233 (93.13%), Query Frame = 0
BLAST of Cucsat.G10662 vs. ExPASy TrEMBL
Match: A0A6J1C3Z5 (50S ribosomal protein L6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008030 PE=3 SV=1) HSP 1 Score: 404 bits (1038), Expect = 1.07e-140 Identity = 199/215 (92.56%), Postives = 209/215 (97.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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