Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAATAAATTTATCAGGAGAAATGTGAGGTTCAAAATTTCAAAGGCATGCATGTGATTTCACCTCCCCCCCCAATGAATTCATCCCTGGAAAATTTGAACATTATTTGAAACAATTAAAAGCAGCAAGCAATATGAATAAATGCACCAATAAAACAGCAACTAACCACATACTCTTCCACCTGTAAGAAGTAACTTCACTTTCCCTCATCCCCCCCTTCTATATATTCCCCCATTTGTTCTAAACATTCCATCCATCACCATTACCATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCAATCAGAAAAACAACCAACCGAAGAAACACAACCATGAGAAGCAAACAAGTTTCTGCTCTCGTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTGCTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTATTGCACATTCACAATGAATCTCACACATTCAGTACCAGTATTAGTAGTAATGGTAGTGATTAGTAGGCTTACAGCATTATTTGTTTACTTTGCATTGCAGGTTCACATAGCAGCCCTATGCCACCATCACATGGTAGTGGAGGAACGCCACATTACTCCACACCAACTCCTTCCACACCATCAAATCCGCCGTCTGGTGGTGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAACCACACCTACCATTCCCACTATTCCATTTACCTGCACGTAAGTCAAGGGTTTTTAGTAACTGTTTTCCATGGAGAAGAGAACATATTTGTTTATAAAAATGTGTTTGTTACTTTGTTTGCAGTTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTATCTAACACAAGGAATGATGGGTATGGGGCTCTTTTGAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACTAAGCAAGTTAGGACAAGTTTCGTCTCGGCACTCAGCTCCAACAAAGCAGCAGGCAGTCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCCCTTTTTCCTACCATTTACCATCTTAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTTTGTTTTATTTTGTTTTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCAGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTTGTTTCAAGTACTTAAATTTATTTAATCATATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATTGTTTCTATCACTATGCTTTAAAAGGATAGTAAAATCCATGCAGAGTTTGTATTTATGGCGCATTAATGAGGAAATGCACTACATTCAATAAGGTTAACCTACAAAAGAACAAACAACTTGGGATGCCCTTGGGTTGGATTTAAAGACCAGAGCTTGATTTTGTGAACAGTATAAATGCTAAATCTGAAATATCAACGGTGTAAAAGGGAGACATAATAGAGTAAGTGCAGTAAACAAACTCATATAGATGAAAAAAGCCAACAGCCATTAGGAAACGTCTGGTCCGGTGCTCTGAGAAGGTGGGTCCGCGTAGTTAAGAATTCCCATTAAGCCAACCACCCAAGATATTTTACCTTGAAAAACAGCAGGAAAAGTAATAATAGAAACATAAACTCATATGCCGTTAACAAAAAGTTCAGTTGTTCATAGCCATAAATTTAGTTTGATAATCTTCTTGCGCCAATGGAGATTCAATCGTTCCTTGGATGGAAGAACAATATGACAGTATTTCAAATAAAGTACCAAACAACATTTCACATTGAAGATTAAATTGTAGACCACCAAGCACCAGCCAGAACAACAAAATGGGAGTTGAACTTTATCATTTATTCACGTTATTACTTCAACTTTCTTAACAGAACAGTGAAGAAATGGATACTAAACCATCGCCACTAGCATTACAAAAATTGTGGATGAAAAACTGTTATCTGTACATTTTCTTCAAGTGCGTGTGCTTGGAAAGGTGTTTGTCCTAAGAACCTGGATTTTCTTTAAATGTTGATAGAATCAACTCAAGTAAAGTGAGATTCAAACCATGTGAAGATCTTGTCAGCCTCTAAGCTAGTCATTTCGTGGTATGCAAAGGCAAGATTCAACTCTTCTTGAATGTGATTGGTTAAACTATTATCAGGTAAACTAATCCCACTGGCCTTCAGGGCTTCTTTCCACCGTGTTGCGCGTCCATCTTTGAGCATCTTTCCATTTCCATCTACAAAGCCCTTGGCTTGGAAAAGCTCAAACAACTTTGCAGAAACACTCTTGTCAAGTCCTGGGATTCGGTCAGCCAAAAAATGTGGCGACAGAGCAAACTCTAAGCATTCAATCTCAGCAACATCAATTCCTTTACCTTTCAAAAACTCCATATTTTCATTGATCTTTTGTTGCCTAAAATGATCTTTAGGCATGTGTACAAACAGAGTAGGTGGGTATCTCTCTGTTACCTCCATTTGTTCATACAACCCTTCGGCAATCATCAACGTAATGCTATCAAATTTGAACTTAGTGGCAAGTACCGAAAGAAAATACCCACCAGAGGAGGCACCTAAACCCACAAGAGGAAGTTTCTCAAGTTTGTTCTTTTCAACCCACCAACGTATGATGTCTTTAACAACTGCCAATTCCTTCCCCAATGTCCAACATTTCTGTGAGCTTGATATTGTAAGAACTGCAAAATGTTTGCTGAGAGCATGAAGGACAATCAACCGTTCTTCAGGCAGACCGACACAAGAAGGACATTCAGGAGATCTGTCCCAGAAGTTGACAGCTTTACCATTGCAGCCATGAGCAAAGAACAAAACAGACTTTGGAGAATCAGGAATTTGCGATATTATATCAGTTCCATTGCGAAACTCTCTATTTGGATTAAATTGCACAAGAGAGTTAAAGCTATCCCATTTCTGCTTTGGAGTCGCCTCAACTAAAATATCATGTTCTTGAGACTCCTTGCGAAATAACATCATCAATACAAAAAGGATAAGAAAAGCAGACACGATAAGAATCGAGATTTTCTGCTGTTTGTACCATGCCTTTGACTTGTTTCCATGCTTCACCATACCTGAAGAAAGAAAGACGTCGCATTCTATTAAGATCATCATAAATAATTTCAAACCTACAAGTGATGCGATCAGTTAGATTAGAACCTCATAGAAGAATCACATTCAGTATAGCACATCCCATTCCTTCCTCCTCACAAAACGAAAAAAAATGATACAACATCTAAACACAGGGCTTAATTTTTTTTTTTTGACGGAAACATGTTCAATTAACATAATTACAATCGGTGTCAATAATTAGAAAGAATAAAGCAAAGCAATTTGAGGAGCTAATTCTTACTGATTCAGAAACATTGCAACGTGGGATTGCACGCAATGATCACAAAACAAAAGATGAAGACGACCAATGTTCATTTCTCTTCACCCATTTAAACCCCTTTCGTTCTCCAACAAAACAAACGCATAATTTCTGAAGTTGGATCGAGGAATGGCACAAATTAAATGAACAGAGAGAATGTTACCTTGGCTTGGGTTATGAATTCAAAAAGACAAATCTGACGTTTGAACTCAGCTGCGAGTGTTGAAAAAAACTCTCCCACCCCAACCGCCAAAATAGAAAAAGGAAAACGAAAAGCTAACACACACAATCGAAGTTGATCT
Coding sequence (CDS)
ATGAGAAGCAAACAAGTTTCTGCTCTCGTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTGCTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTCACATAGCAGCCCTATGCCACCATCACATGGTAGTGGAGGAACGCCACATTACTCCACACCAACTCCTTCCACACCATCAAATCCGCCGTCTGGTGGTGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAACCACACCTACCATTCCCACTATTCCATTTACCTGCACTTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTATCTAACACAAGGAATGATGGGTATGGGGCTCTTTTGAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACTAAGCAAGTTAGGACAAGTTTCGTCTCGGCACTCAGCTCCAACAAAGCAGCAGGCAGTCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGA
Protein sequence
MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPSHGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPTTPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPRA
Homology
BLAST of Cucsat.G10575 vs. ExPASy Swiss-Prot
Match:
Q9S728 (Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 2.9e-46
Identity = 142/303 (46.86%), Postives = 170/303 (56.11%), Query Frame = 0
Query: 6 VSALVFTLLAGLLSQSLLIPVLSTSIADQKSYY-SPPDPHSGSPPS-------------- 65
VS V+ L A LLSQ L V S D K+YY SPP G+PPS
Sbjct: 5 VSFAVWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYD 64
Query: 66 ---GSHSSPMPPSH---------------------------GSGGTP-------HYSTPT 125
+ S P PPSH G P H STP+
Sbjct: 65 PSPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPS 124
Query: 126 PSTPSNPPSGGGGYYNPPSSGG----SPPSTPVDPGTP---STPSTPSV-PSTPTTPTIP 185
TPS+PPS GGYY+ P +PPS VDPGTP +P TP + P TP TP IP
Sbjct: 125 HPTPSHPPS--GGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIP 184
Query: 186 T----IPFTCTYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTR 241
I TC YW NHP LIWG+LGWWGT+G AFG +++PGF ++NLLQALSNTR
Sbjct: 185 APFPPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTR 244
BLAST of Cucsat.G10575 vs. NCBI nr
Match:
XP_004143175.1 (protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_020699 [Cucumis sativus])
HSP 1 Score: 455 bits (1171), Expect = 4.73e-161
Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS
Sbjct: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
Query: 61 HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT
Sbjct: 61 HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240
BLAST of Cucsat.G10575 vs. NCBI nr
Match:
XP_008456355.1 (PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal factor 1-like [Cucumis melo var. makuwa] >TYK27542.1 protodermal factor 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 428 bits (1101), Expect = 1.91e-150
Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1 MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
Query: 61 HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
HG+GGTPHYSTPTPSTPS GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61 HGNGGTPHYSTPTPSTPS----GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237
BLAST of Cucsat.G10575 vs. NCBI nr
Match:
XP_038900371.1 (protodermal factor 1-like [Benincasa hispida])
HSP 1 Score: 404 bits (1037), Expect = 1.39e-140
Identity = 217/244 (88.93%), Postives = 229/244 (93.85%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPP-DPHSGSPPSGSHSSPMPP 60
MR+KQ S L+FTLLAGLLSQSLLIPV STSIADQKSYYSPP DPHSG+PP+GSHSSP+PP
Sbjct: 1 MRTKQASVLLFTLLAGLLSQSLLIPVFSTSIADQKSYYSPPSDPHSGTPPTGSHSSPIPP 60
Query: 61 SHGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGG-SPPSTPVDPGTPSTPSTPSVPS 120
SHG GG+P HYSTPTPSTPS PPS GGGYYNPPSSGG SPP+TPVDPGTPSTPSTP VPS
Sbjct: 61 SHGYGGSPPHYSTPTPSTPSKPPSSGGGYYNPPSSGGGSPPTTPVDPGTPSTPSTPGVPS 120
Query: 121 TPTTPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
TP+TP+IPT PFTC YWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPSTPSIPTTPFTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKI 240
DG+GALLREGTASYLNSLASNRFP+TTKQVRTSFVSALSSNKAA QANTFKLANEGKI
Sbjct: 181 TDGFGALLREGTASYLNSLASNRFPFTTKQVRTSFVSALSSNKAAADQANTFKLANEGKI 240
BLAST of Cucsat.G10575 vs. NCBI nr
Match:
XP_022970795.1 (protodermal factor 1-like [Cucurbita maxima])
HSP 1 Score: 375 bits (962), Expect = 5.25e-129
Identity = 202/251 (80.48%), Postives = 221/251 (88.05%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
HG GGTP HYSTPTPSTPS PSG GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120
Query: 121 TTPTIP------------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
+TP+ P T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180
Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQAN 238
NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA QAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240
BLAST of Cucsat.G10575 vs. NCBI nr
Match:
XP_022947015.1 (protodermal factor 1-like [Cucurbita moschata])
HSP 1 Score: 372 bits (955), Expect = 5.30e-128
Identity = 201/248 (81.05%), Postives = 221/248 (89.11%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
HG GGTP HYSTPTPSTP+ PSGG GYYNPPS GGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPPS-GGSTPTTPVDPGTPSTPSTPSTPSTP 120
Query: 121 TTPTIP---------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
+TP+ P T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180
Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFK 238
QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA QAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240
BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match:
A0A0A0KF76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1)
HSP 1 Score: 455 bits (1171), Expect = 2.29e-161
Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS
Sbjct: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
Query: 61 HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT
Sbjct: 61 HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240
BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match:
A0A5A7UHX0 (Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00090 PE=4 SV=1)
HSP 1 Score: 428 bits (1101), Expect = 9.26e-151
Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1 MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
Query: 61 HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
HG+GGTPHYSTPTPSTPS GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61 HGNGGTPHYSTPTPSTPS----GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237
BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match:
A0A1S3C4A9 (protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1)
HSP 1 Score: 428 bits (1101), Expect = 9.26e-151
Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1 MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
Query: 61 HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
HG+GGTPHYSTPTPSTPS GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61 HGNGGTPHYSTPTPSTPS----GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120
Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237
BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match:
A0A6J1I3W1 (protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1)
HSP 1 Score: 375 bits (962), Expect = 2.54e-129
Identity = 202/251 (80.48%), Postives = 221/251 (88.05%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
HG GGTP HYSTPTPSTPS PSG GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120
Query: 121 TTPTIP------------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
+TP+ P T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180
Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQAN 238
NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA QAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240
BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match:
A0A6J1G5M6 (protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=1)
HSP 1 Score: 372 bits (955), Expect = 2.57e-128
Identity = 201/248 (81.05%), Postives = 221/248 (89.11%), Query Frame = 0
Query: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
HG GGTP HYSTPTPSTP+ PSGG GYYNPPS GGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPPS-GGSTPTTPVDPGTPSTPSTPSTPSTP 120
Query: 121 TTPTIP---------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
+TP+ P T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180
Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFK 238
QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA QAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9S728 | 2.9e-46 | 46.86 | Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_004143175.1 | 4.73e-161 | 99.59 | protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_0206... | [more] |
XP_008456355.1 | 1.91e-150 | 94.19 | PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal fa... | [more] |
XP_038900371.1 | 1.39e-140 | 88.93 | protodermal factor 1-like [Benincasa hispida] | [more] |
XP_022970795.1 | 5.25e-129 | 80.48 | protodermal factor 1-like [Cucurbita maxima] | [more] |
XP_022947015.1 | 5.30e-128 | 81.05 | protodermal factor 1-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KF76 | 2.29e-161 | 99.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1 | [more] |
A0A5A7UHX0 | 9.26e-151 | 94.19 | Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A1S3C4A9 | 9.26e-151 | 94.19 | protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1 | [more] |
A0A6J1I3W1 | 2.54e-129 | 80.48 | protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1 | [more] |
A0A6J1G5M6 | 2.57e-128 | 81.05 | protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=... | [more] |