Cucsat.G10575 (gene) Cucumber (B10) v3

Overview
NameCucsat.G10575
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionprotodermal factor 1-like
Locationctg1679: 364898 .. 368885 (-)
RNA-Seq ExpressionCucsat.G10575
SyntenyCucsat.G10575
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAATAAATTTATCAGGAGAAATGTGAGGTTCAAAATTTCAAAGGCATGCATGTGATTTCACCTCCCCCCCCAATGAATTCATCCCTGGAAAATTTGAACATTATTTGAAACAATTAAAAGCAGCAAGCAATATGAATAAATGCACCAATAAAACAGCAACTAACCACATACTCTTCCACCTGTAAGAAGTAACTTCACTTTCCCTCATCCCCCCCTTCTATATATTCCCCCATTTGTTCTAAACATTCCATCCATCACCATTACCATTCCTTCCCTTCTTTCCCATCTCTAATCCCTTTGCTCCCAATCAGAAAAACAACCAACCGAAGAAACACAACCATGAGAAGCAAACAAGTTTCTGCTCTCGTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTGCTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTATTGCACATTCACAATGAATCTCACACATTCAGTACCAGTATTAGTAGTAATGGTAGTGATTAGTAGGCTTACAGCATTATTTGTTTACTTTGCATTGCAGGTTCACATAGCAGCCCTATGCCACCATCACATGGTAGTGGAGGAACGCCACATTACTCCACACCAACTCCTTCCACACCATCAAATCCGCCGTCTGGTGGTGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAACCACACCTACCATTCCCACTATTCCATTTACCTGCACGTAAGTCAAGGGTTTTTAGTAACTGTTTTCCATGGAGAAGAGAACATATTTGTTTATAAAAATGTGTTTGTTACTTTGTTTGCAGTTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTATCTAACACAAGGAATGATGGGTATGGGGCTCTTTTGAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACTAAGCAAGTTAGGACAAGTTTCGTCTCGGCACTCAGCTCCAACAAAGCAGCAGGCAGTCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGATTTCCCCCCTTTTTCCTACCATTTACCATCTTAATAACTAATGAGTGTGCCTTAGCAGTTAGTAGTGAGACAGTGAGACCAATTTACCATTGCATGTGTTTTGTTTTATTTTGTTTTTGTTTCTAGTTTCTTGCAATCTCTTTTGTTCATGTATTTGAACATAGAGATGCTCAGTCTTTGTTATCCAAATTCATTGTGAAATCAAGATTTGTTTCAAGTACTTAAATTTATTTAATCATATTATCCAAAAGGGGGTTGAAAATTAAAAGTTCAGATGCTTGTTATCTACACTAATCTATTGTTTCTATCACTATGCTTTAAAAGGATAGTAAAATCCATGCAGAGTTTGTATTTATGGCGCATTAATGAGGAAATGCACTACATTCAATAAGGTTAACCTACAAAAGAACAAACAACTTGGGATGCCCTTGGGTTGGATTTAAAGACCAGAGCTTGATTTTGTGAACAGTATAAATGCTAAATCTGAAATATCAACGGTGTAAAAGGGAGACATAATAGAGTAAGTGCAGTAAACAAACTCATATAGATGAAAAAAGCCAACAGCCATTAGGAAACGTCTGGTCCGGTGCTCTGAGAAGGTGGGTCCGCGTAGTTAAGAATTCCCATTAAGCCAACCACCCAAGATATTTTACCTTGAAAAACAGCAGGAAAAGTAATAATAGAAACATAAACTCATATGCCGTTAACAAAAAGTTCAGTTGTTCATAGCCATAAATTTAGTTTGATAATCTTCTTGCGCCAATGGAGATTCAATCGTTCCTTGGATGGAAGAACAATATGACAGTATTTCAAATAAAGTACCAAACAACATTTCACATTGAAGATTAAATTGTAGACCACCAAGCACCAGCCAGAACAACAAAATGGGAGTTGAACTTTATCATTTATTCACGTTATTACTTCAACTTTCTTAACAGAACAGTGAAGAAATGGATACTAAACCATCGCCACTAGCATTACAAAAATTGTGGATGAAAAACTGTTATCTGTACATTTTCTTCAAGTGCGTGTGCTTGGAAAGGTGTTTGTCCTAAGAACCTGGATTTTCTTTAAATGTTGATAGAATCAACTCAAGTAAAGTGAGATTCAAACCATGTGAAGATCTTGTCAGCCTCTAAGCTAGTCATTTCGTGGTATGCAAAGGCAAGATTCAACTCTTCTTGAATGTGATTGGTTAAACTATTATCAGGTAAACTAATCCCACTGGCCTTCAGGGCTTCTTTCCACCGTGTTGCGCGTCCATCTTTGAGCATCTTTCCATTTCCATCTACAAAGCCCTTGGCTTGGAAAAGCTCAAACAACTTTGCAGAAACACTCTTGTCAAGTCCTGGGATTCGGTCAGCCAAAAAATGTGGCGACAGAGCAAACTCTAAGCATTCAATCTCAGCAACATCAATTCCTTTACCTTTCAAAAACTCCATATTTTCATTGATCTTTTGTTGCCTAAAATGATCTTTAGGCATGTGTACAAACAGAGTAGGTGGGTATCTCTCTGTTACCTCCATTTGTTCATACAACCCTTCGGCAATCATCAACGTAATGCTATCAAATTTGAACTTAGTGGCAAGTACCGAAAGAAAATACCCACCAGAGGAGGCACCTAAACCCACAAGAGGAAGTTTCTCAAGTTTGTTCTTTTCAACCCACCAACGTATGATGTCTTTAACAACTGCCAATTCCTTCCCCAATGTCCAACATTTCTGTGAGCTTGATATTGTAAGAACTGCAAAATGTTTGCTGAGAGCATGAAGGACAATCAACCGTTCTTCAGGCAGACCGACACAAGAAGGACATTCAGGAGATCTGTCCCAGAAGTTGACAGCTTTACCATTGCAGCCATGAGCAAAGAACAAAACAGACTTTGGAGAATCAGGAATTTGCGATATTATATCAGTTCCATTGCGAAACTCTCTATTTGGATTAAATTGCACAAGAGAGTTAAAGCTATCCCATTTCTGCTTTGGAGTCGCCTCAACTAAAATATCATGTTCTTGAGACTCCTTGCGAAATAACATCATCAATACAAAAAGGATAAGAAAAGCAGACACGATAAGAATCGAGATTTTCTGCTGTTTGTACCATGCCTTTGACTTGTTTCCATGCTTCACCATACCTGAAGAAAGAAAGACGTCGCATTCTATTAAGATCATCATAAATAATTTCAAACCTACAAGTGATGCGATCAGTTAGATTAGAACCTCATAGAAGAATCACATTCAGTATAGCACATCCCATTCCTTCCTCCTCACAAAACGAAAAAAAATGATACAACATCTAAACACAGGGCTTAATTTTTTTTTTTTGACGGAAACATGTTCAATTAACATAATTACAATCGGTGTCAATAATTAGAAAGAATAAAGCAAAGCAATTTGAGGAGCTAATTCTTACTGATTCAGAAACATTGCAACGTGGGATTGCACGCAATGATCACAAAACAAAAGATGAAGACGACCAATGTTCATTTCTCTTCACCCATTTAAACCCCTTTCGTTCTCCAACAAAACAAACGCATAATTTCTGAAGTTGGATCGAGGAATGGCACAAATTAAATGAACAGAGAGAATGTTACCTTGGCTTGGGTTATGAATTCAAAAAGACAAATCTGACGTTTGAACTCAGCTGCGAGTGTTGAAAAAAACTCTCCCACCCCAACCGCCAAAATAGAAAAAGGAAAACGAAAAGCTAACACACACAATCGAAGTTGATCT

Coding sequence (CDS)

ATGAGAAGCAAACAAGTTTCTGCTCTCGTTTTCACTTTGCTTGCTGGGCTGCTTTCTCAAAGCCTACTCATCCCTGTATTGTCCACCTCCATTGCTGATCAGAAAAGCTACTACTCTCCTCCAGACCCACATTCTGGATCTCCTCCATCAGGTTCACATAGCAGCCCTATGCCACCATCACATGGTAGTGGAGGAACGCCACATTACTCCACACCAACTCCTTCCACACCATCAAATCCGCCGTCTGGTGGTGGTGGATACTACAACCCTCCGTCTTCTGGTGGTAGCCCACCAAGCACCCCTGTAGATCCAGGCACTCCTAGCACTCCAAGCACTCCTAGTGTTCCTAGCACACCAACCACACCTACCATTCCCACTATTCCATTTACCTGCACTTATTGGCTGAATCATCCAGGATTGATATGGGGAGTATTGGGATGGTGGGGAACATTAGGAAATGCCTTCGGAGCAACCAATGTCCCAGGGTTTGGAACAAATCTCAACTTGCTCCAAGCACTATCTAACACAAGGAATGATGGGTATGGGGCTCTTTTGAGAGAAGGAACTGCTTCGTACCTCAACTCTCTTGCTAGTAACAGATTCCCCTACACAACTAAGCAAGTTAGGACAAGTTTCGTCTCGGCACTCAGCTCCAACAAAGCAGCAGGCAGTCAGGCCAACACGTTCAAGTTAGCCAACGAGGGCAAAATTAAACCCAGAGCTTGA

Protein sequence

MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPSHGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPTTPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPRA
Homology
BLAST of Cucsat.G10575 vs. ExPASy Swiss-Prot
Match: Q9S728 (Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-46
Identity = 142/303 (46.86%), Postives = 170/303 (56.11%), Query Frame = 0

Query: 6   VSALVFTLLAGLLSQSLLIPVLSTSIADQKSYY-SPPDPHSGSPPS-------------- 65
           VS  V+ L A LLSQ L   V S    D K+YY SPP    G+PPS              
Sbjct: 5   VSFAVWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYD 64

Query: 66  ---GSHSSPMPPSH---------------------------GSGGTP-------HYSTPT 125
               + S P PPSH                             G  P       H STP+
Sbjct: 65  PSPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPS 124

Query: 126 PSTPSNPPSGGGGYYNPPSSGG----SPPSTPVDPGTP---STPSTPSV-PSTPTTPTIP 185
             TPS+PPS  GGYY+ P        +PPS  VDPGTP    +P TP + P TP TP IP
Sbjct: 125 HPTPSHPPS--GGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIP 184

Query: 186 T----IPFTCTYWLNHPGLIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTR 241
                I  TC YW NHP LIWG+LGWWGT+G AFG     +++PGF  ++NLLQALSNTR
Sbjct: 185 APFPPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTR 244

BLAST of Cucsat.G10575 vs. NCBI nr
Match: XP_004143175.1 (protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_020699 [Cucumis sativus])

HSP 1 Score: 455 bits (1171), Expect = 4.73e-161
Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60

Query: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
           HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT
Sbjct: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120

Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240

BLAST of Cucsat.G10575 vs. NCBI nr
Match: XP_008456355.1 (PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal factor 1-like [Cucumis melo var. makuwa] >TYK27542.1 protodermal factor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1101), Expect = 1.91e-150
Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
           HG+GGTPHYSTPTPSTPS    GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61  HGNGGTPHYSTPTPSTPS----GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120

Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237

BLAST of Cucsat.G10575 vs. NCBI nr
Match: XP_038900371.1 (protodermal factor 1-like [Benincasa hispida])

HSP 1 Score: 404 bits (1037), Expect = 1.39e-140
Identity = 217/244 (88.93%), Postives = 229/244 (93.85%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPP-DPHSGSPPSGSHSSPMPP 60
           MR+KQ S L+FTLLAGLLSQSLLIPV STSIADQKSYYSPP DPHSG+PP+GSHSSP+PP
Sbjct: 1   MRTKQASVLLFTLLAGLLSQSLLIPVFSTSIADQKSYYSPPSDPHSGTPPTGSHSSPIPP 60

Query: 61  SHGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGG-SPPSTPVDPGTPSTPSTPSVPS 120
           SHG GG+P HYSTPTPSTPS PPS GGGYYNPPSSGG SPP+TPVDPGTPSTPSTP VPS
Sbjct: 61  SHGYGGSPPHYSTPTPSTPSKPPSSGGGYYNPPSSGGGSPPTTPVDPGTPSTPSTPGVPS 120

Query: 121 TPTTPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180
           TP+TP+IPT PFTC YWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR
Sbjct: 121 TPSTPSIPTTPFTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTR 180

Query: 181 NDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKI 240
            DG+GALLREGTASYLNSLASNRFP+TTKQVRTSFVSALSSNKAA  QANTFKLANEGKI
Sbjct: 181 TDGFGALLREGTASYLNSLASNRFPFTTKQVRTSFVSALSSNKAAADQANTFKLANEGKI 240

BLAST of Cucsat.G10575 vs. NCBI nr
Match: XP_022970795.1 (protodermal factor 1-like [Cucurbita maxima])

HSP 1 Score: 375 bits (962), Expect = 5.25e-129
Identity = 202/251 (80.48%), Postives = 221/251 (88.05%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGTP HYSTPTPSTPS  PSG  GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 TTPTIP------------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
           +TP+ P            T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180

Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQAN 238
           NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA  QAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240

BLAST of Cucsat.G10575 vs. NCBI nr
Match: XP_022947015.1 (protodermal factor 1-like [Cucurbita moschata])

HSP 1 Score: 372 bits (955), Expect = 5.30e-128
Identity = 201/248 (81.05%), Postives = 221/248 (89.11%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGTP HYSTPTPSTP+  PSGG GYYNPPS GGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPPS-GGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 TTPTIP---------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
           +TP+ P         T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180

Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFK 238
           QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA  QAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240

BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match: A0A0A0KF76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 2.29e-161
Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS
Sbjct: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60

Query: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
           HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT
Sbjct: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120

Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG+QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGKIKPR 240

BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match: A0A5A7UHX0 (Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00090 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 9.26e-151
Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
           HG+GGTPHYSTPTPSTPS    GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61  HGNGGTPHYSTPTPSTPS----GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120

Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237

BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match: A0A1S3C4A9 (protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 9.26e-151
Identity = 227/241 (94.19%), Postives = 231/241 (95.85%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MRSKQ SAL+FTLLAGLLSQSLLIPVLSTSI DQKSYYSPPDPHSGSPPSGSH SP+PPS
Sbjct: 1   MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60

Query: 61  HGSGGTPHYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPT 120
           HG+GGTPHYSTPTPSTPS    GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP+
Sbjct: 61  HGNGGTPHYSTPTPSTPS----GGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTPS 120

Query: 121 TPTIPTIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180
           TPTIPT PFTC YWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG
Sbjct: 121 TPTIPTTPFTCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRNDG 180

Query: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFKLANEGKIKPR 240
           YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAG QANTFKLANEGKIKPR
Sbjct: 181 YGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGKIKPR 237

BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match: A0A6J1I3W1 (protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1)

HSP 1 Score: 375 bits (962), Expect = 2.54e-129
Identity = 202/251 (80.48%), Postives = 221/251 (88.05%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGTP HYSTPTPSTPS  PSG  GYYNPPSSGGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSSGGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 TTPTIP------------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNL 180
           +TP+ P            T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 STPSTPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180

Query: 181 NLLQALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQAN 238
           NLLQALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA  QAN
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240

BLAST of Cucsat.G10575 vs. ExPASy TrEMBL
Match: A0A6J1G5M6 (protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=1)

HSP 1 Score: 372 bits (955), Expect = 2.57e-128
Identity = 201/248 (81.05%), Postives = 221/248 (89.11%), Query Frame = 0

Query: 1   MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
           MR+KQ S L+FTLLAGLLSQSLLIPVLST+IADQKSYYSPPDPH+G+PP+GSHS+P+PPS
Sbjct: 1   MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60

Query: 61  HGSGGTP-HYSTPTPSTPSNPPSGGGGYYNPPSSGGSPPSTPVDPGTPSTPSTPSVPSTP 120
           HG GGTP HYSTPTPSTP+  PSGG GYYNPPS GGS P+TPVDPGTPSTPSTPS PSTP
Sbjct: 61  HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPPS-GGSTPTTPVDPGTPSTPSTPSTPSTP 120

Query: 121 TTPTIP---------TIPFTCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLL 180
           +TP+ P         T PFTC +WLNHPG+IWGVLGWWGTLGN FGATNVPGFGTNLNLL
Sbjct: 121 STPSTPSTPSTPGTPTTPFTCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNLNLL 180

Query: 181 QALSNTRNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGSQANTFK 238
           QALSNTR DG+GALLREGTASYLNSLASNRFP+TTKQV++SFVSAL+SN+AA  QAN FK
Sbjct: 181 QALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQANIFK 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9S7282.9e-4646.86Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_004143175.14.73e-16199.59protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_0206... [more]
XP_008456355.11.91e-15094.19PREDICTED: protodermal factor 1-like [Cucumis melo] >KAA0054578.1 protodermal fa... [more]
XP_038900371.11.39e-14088.93protodermal factor 1-like [Benincasa hispida][more]
XP_022970795.15.25e-12980.48protodermal factor 1-like [Cucurbita maxima][more]
XP_022947015.15.30e-12881.05protodermal factor 1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A0A0KF762.29e-16199.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1[more]
A0A5A7UHX09.26e-15194.19Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3C4A99.26e-15194.19protodermal factor 1-like OS=Cucumis melo OX=3656 GN=LOC103496321 PE=4 SV=1[more]
A0A6J1I3W12.54e-12980.48protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1[more]
A0A6J1G5M62.57e-12881.05protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..121
NoneNo IPR availablePANTHERPTHR33210:SF18PROTODERMAL FACTOR 1coord: 1..241
IPR039923Protodermal factor 1PANTHERPTHR33210PROTODERMAL FACTOR 1coord: 1..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G10575.T1Cucsat.G10575.T1mRNA