Csor.00g314120 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGCCGACAAGGTACATTCAAAACAAACATTCGGTGTCGTGTCGTGTCGTGTGTGAGTCAAATGATTCTTTAGCGTGCAACGATTTTGGTGCAGTTTTTGTCGTATCTTCTAGTAACGAGCACTGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAAGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGGTATATGCAACCTCAGCTCTTCTCTTATTTGCATTCTCTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTACGTTCTCAAAGAGACCTTAATTAATTCATCTTTTCGATTTTTATAGAATTTTAGTATTAATGTAACATGTTCGATGAAAAAAAGTTAAATTTTAAGTTAACATATTCGAAAAAATTAATTGTTATATCATTAAATTATTATTATTTTCTCTGAATTTTGGAAATAAATATACTTGCGTATGCGACATAATAATACGTCATTATTTATTATTTTATTTTTATTTTTTAACGTTGACTTTTATAGAAACTAAGAAGAAATAAGTCCAGGTTTGATGAGATGGGTTGGAGGGACAACCCTATGACAGCTGATATGGACAAGAATGCCAGGTCATTTCCTGCGTATAATTATCCACCTCAGAAATAGGAAATGAAAATGAAAAATCTACAAATTCAATTCACATTATTCCAAAAAATGGAAATTGGTAGCCCACCACTTGTTTCCGCAATTTATTTATGGCCACAACTTTACCAAATTAAATAATTAAATTCATTTTATTCCCAACTTGCCCGCCTACTTTAATAATAATATGATTATTATTATTATTATTTTTGGTCAAACATATAAATATAATAGCGAGGAAATAAACATATTTAAAATAAAAAATAGCGCGTGGGAGGAGTATAACCATCAACCTCACAACTTCTTTATTTAATATCTCGAGGAATCGACGAATTTCTACGGTGGTTTGACATTATTTTTTTCTCTCGTAATTTTTACGGTGGTTTGAACATAATCTCTCGTAATTTTATTTTTTATTTTTTTCAAAAAATTTCTTTTATTAATTAATACCCATGATTTTCCCTAAACAAGCTAAGGTAAGACTCCACAATAAAAGATTCAAAATGAAATTGAAAACAAAACTTTATTTCTTAAAAAACAAGTATTTAAAATTTAATCACATGACACAATAACTCGACCAACTTAGATTATCTAATCCAAACCATAAAAGTTGGGTTATGTTAAATTCTTTTTTAGTTCGGATTGGGTTCAATCTTTGAAGAACTAAAAACTTGGTTCGATTCGTGTACACAATTGACGGAGAAAAAAAAAAAAAAATTTTGATTTTCAAATTTTCTAGAAGAGAGGCCAATCACCAACTCGTCTCTTATGATTAATTTCCAAGAACTTATGGGATTTATTTATGACTTGGTAAACGTCGTGTTTGAGGGCTATAAAACCCTCTTCCGTGCAATTTCATGCCATTTTTGTGGAGAGAATTACAAAGAGTTTTTGGTTTTGTTAATATCATAAGAGAAACATGGAAAGTTCAAGTGGTGCAAGGGTGACTTGTCTTATATTGAGAATCCTAACCTTCGTGTTTCTATTCATCTCCTTCTTCGTTCTCGTCACCACGTCCCAAACCGTTGAATCCGTAAAGTTTCATTTCAACAACTTCCATACATATAGGTACGTGCTTGCTACAATCATCATCGGGATCGTATTCAACCTCTTGCAAATCGCATTCTCCCTCTTAAATATCGTTAAAGGTGCAACCGGTACCATACTATTTGATTTCTTTGGCGACAAGGTACGTTATACACACACATCTAGTGTCATGTTTGATTCTATTCGAATATGTGGCCCTAAACGCGTCGGTTTTGGTGCAGTTTTTGTCATACCTTCTAGCCACAGGCACAGCAGCTGGGTTTGGACTATCAGTGGATTTGCAAACATTAGACCCAGATGACTACTTTGGAACGTTCTTTGACAAGGCATATGCGGCCTCGGCTCTTCTTTTGTTCGCGTTCTTTTGTTCGGCGGCGGTCTCTATTATCTCTTCCTTTGCACTCTCGAAGCGACCTTAA ATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGCCGACAAGTTTTTGTCGTATCTTCTAGTAACGAGCACTGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAAGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGAAACTAAGAAGAAATAAGTCCAGGTTTGATGAGATGGGTTGGAGGGACAACCCTATGACAGCTGATATGGACAAGAATGCCAGGTACGTGCTTGCTACAATCATCATCGGGATCGTATTCAACCTCTTGCAAATCGCATTCTCCCTCTTAAATATCGTTAAAGGTGCAACCGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCCACAGGCACAGCAGCTGGGTTTGGACTATCAGTGGATTTGCAAACATTAGACCCAGATGACTACTTTGGAACGTTCTTTGACAAGGCATATGCGGCCTCGGCTCTTCTTTTGTTCGCGTTCTTTTGTTCGGCGGCGGTCTCTATTATCTCTTCCTTTGCACTCTCGAAGCGACCTTAA ATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGCCGACAAGTTTTTGTCGTATCTTCTAGTAACGAGCACTGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAAGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGAAACTAAGAAGAAATAAGTCCAGGTTTGATGAGATGGGTTGGAGGGACAACCCTATGACAGCTGATATGGACAAGAATGCCAGGTACGTGCTTGCTACAATCATCATCGGGATCGTATTCAACCTCTTGCAAATCGCATTCTCCCTCTTAAATATCGTTAAAGGTGCAACCGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCCACAGGCACAGCAGCTGGGTTTGGACTATCAGTGGATTTGCAAACATTAGACCCAGATGACTACTTTGGAACGTTCTTTGACAAGGCATATGCGGCCTCGGCTCTTCTTTTGTTCGCGTTCTTTTGTTCGGCGGCGGTCTCTATTATCTCTTCCTTTGCACTCTCGAAGCGACCTTAA MLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFADKFLSYLLVTSTAAGFGVSVDLQRTKDPEDLFGTFFGKKLRRNKSRFDEMGWRDNPMTADMDKNARYVLATIIIGIVFNLLQIAFSLLNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQTLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKRP Homology
BLAST of Csor.00g314120 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18 Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 8.3e-18 Identity = 54/110 (49.09%), Postives = 75/110 (68.18%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.4e-17 Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of Csor.00g314120 vs. NCBI nr
Match: KAG6578707.1 (hypothetical protein SDJN03_23155, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 395 bits (1014), Expect = 3.25e-138 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Csor.00g314120 vs. NCBI nr
Match: XP_022939492.1 (CASP-like protein 4D1 [Cucurbita moschata]) HSP 1 Score: 198 bits (504), Expect = 2.34e-61 Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Csor.00g314120 vs. NCBI nr
Match: XP_023549516.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197 bits (501), Expect = 6.69e-61 Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of Csor.00g314120 vs. NCBI nr
Match: XP_022992767.1 (CASP-like protein 4D1 [Cucurbita maxima]) HSP 1 Score: 196 bits (499), Expect = 1.35e-60 Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of Csor.00g314120 vs. NCBI nr
Match: KAG7016238.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195 bits (495), Expect = 2.31e-58 Identity = 120/227 (52.86%), Postives = 146/227 (64.32%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy TrEMBL
Match: A0A6J1FGY1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1) HSP 1 Score: 198 bits (504), Expect = 1.13e-61 Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy TrEMBL
Match: A0A6J1JQU5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1) HSP 1 Score: 196 bits (499), Expect = 6.51e-61 Identity = 104/106 (98.11%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy TrEMBL
Match: A0A6J1FG26 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445380 PE=3 SV=1) HSP 1 Score: 172 bits (435), Expect = 3.44e-51 Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy TrEMBL
Match: A0A1S3C9H1 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1) HSP 1 Score: 168 bits (426), Expect = 7.69e-50 Identity = 90/105 (85.71%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of Csor.00g314120 vs. ExPASy TrEMBL
Match: A0A0A0KU83 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1) HSP 1 Score: 166 bits (419), Expect = 8.84e-49 Identity = 88/105 (83.81%), Postives = 94/105 (89.52%), Query Frame = 0
BLAST of Csor.00g314120 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18 Identity = 54/115 (46.96%), Postives = 74/115 (64.35%), Query Frame = 0
BLAST of Csor.00g314120 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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