Csor.00g312660 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g312660
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr15: 1246048 .. 1246794 (-)
RNA-Seq ExpressionCsor.00g312660
SyntenyCsor.00g312660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTATGCGGATTAGGGTTTTTGGAGGTTGCCAATAAATGGAGAAGACGAAGACGGATTAGAAGACAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGGTTTTTGAAATTGTGGCGCACTCTAAGTGCGTTGGGCTTACATTATCACCTTCTGGTGGGGGCTTCCATGGCCGCTTTGCTGCCCTAGCTTTCGCAGTCAAAGCGAGGGGTTTCGCCCTACATTCAATTCATTTGCTTTGGATTTTTCTTTTCTTTTTCGAACTTCATTCTTACAAATTTCGCTTTCCTTATTCATCTGAGACGTAACTTGGATTTTTTTAGATATATGCATTTCCAAATTTTATTGCTTCTTTCTCTGTAAAATGTATATTTGTTTTTAATAAGCGGCGGAGAAGAATAAATTTGAATTGTTATTATACATGTATATGTTTTCGGGTTTCATTCAAATGATACGAAGGATGCAGGAAAGTTAAAATCACGTTTCCGAAAATTGATCAATTGCATCCGCCGGTATTTTCATTGAACTTGATTGAATATCTCAAATAAATGTATGTATACTTGTAGAAGCTTCTTCTTTCCTGCTTCCTCGCGCTTGTTTCTGGTGTCGGGTTGCAAAACACCAATCTGGGCTCCGTGTGGACGCAGGTTTTGGAACTGCTGCTGCTAAGAATGGTTTTTATGTACGTCTATCATCTGACTATTGCACCGGATAA

mRNA sequence

ATGGAATTATGCGGATTAGGGTTTTTGGAGGTTGCCAATAAATGGAGAAGACGAAGACGGATTAGAAGACAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGAAGCTTCTTCTTTCCTGCTTCCTCGCGCTTGTTTCTGGTGTCGGGTTGCAAAACACCAATCTGGGCTCCGTGTGGACGCAGGTTTTGGAACTGCTGCTGCTAAGAATGGTTTTTATGTACGTCTATCATCTGACTATTGCACCGGATAA

Coding sequence (CDS)

ATGGAATTATGCGGATTAGGGTTTTTGGAGGTTGCCAATAAATGGAGAAGACGAAGACGGATTAGAAGACAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGAAGCTTCTTCTTTCCTGCTTCCTCGCGCTTGTTTCTGGTGTCGGGTTGCAAAACACCAATCTGGGCTCCGTGTGGACGCAGGTTTTGGAACTGCTGCTGCTAAGAATGGTTTTTATGTACGTCTATCATCTGACTATTGCACCGGATAA

Protein sequence

MELCGLGFLEVANKWRRRRRIRRQKPEAERFPLELGVAWYSTGREASSFLLPRACFWCRVAKHQSGLRVDAGFGTAAAKNGFYVRLSSDYCTG
Homology
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BLAST of Csor.00g312660 vs. NCBI nr
Match: KAG6578561.1 (hypothetical protein SDJN03_23009, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (501), Expect = 1.01e-63
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MELCGLGFLEVANKWRRRRRIRRQKPEAERFPLELGVAWYSTGREASSFLLPRACFWCRV 60
          MELCGLGFLEVANKWRRRRRIRRQKPEAERFPLELGVAWYSTGREASSFLLPRACFWCRV
Sbjct: 1  MELCGLGFLEVANKWRRRRRIRRQKPEAERFPLELGVAWYSTGREASSFLLPRACFWCRV 60

Query: 61 AKHQSGLRVDAGFGTAAAKNGFYVRLSSDYCTG 93
          AKHQSGLRVDAGFGTAAAKNGFYVRLSSDYCTG
Sbjct: 61 AKHQSGLRVDAGFGTAAAKNGFYVRLSSDYCTG 93

The following BLAST results are available for this feature:
BLAST of Csor.00g312660 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g312660 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6578561.11.01e-63100.00hypothetical protein SDJN03_23009, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g312660 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g312660 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g312660.m01Csor.00g312660.m01mRNA