Csor.00g297480 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTAAAGTAGACAATATCATATAGGTACGAGAATCATTATTGGACAATGTGAATAAACGCTTTTAGTAAACAAACAACAACATTAATATCAAATTTAGAACATTGCCTCTGATTGCATATAAAATACGCGCTAAAACTAAAATGGGTTTATGCTATATCTAATAATTCGTAAGTAAAAATGTTATTTTTCGAACTAACCTGAAAGGGGTTTAGCGTCGAGAAGGGTTTCAACACCGGGATACTTGCAAGACTTGCAATAAACAACACCTTCGACTTCGATGGACCTTCTCTGATGGTAGGTATGCGGTTTAGGTGGCTCAACGGGGGCGTAGTGAGGCGAAGGGGAAGGAGGGAGGTGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATTGGAGACTCACTCGACGGGGGAAGGTGGTGGGGAACCGGAGATTGGCTTGGTGGCTGATGGGGGATCGGAGACTCGCTTGACGGGGGAAGGGGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTTGACGGGGGAAAGGGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGGGGAAGGTGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGATGGGGGAAGGGGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGGGGAAGGTGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGATGGGGGAAGGGGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGAGGAAGGTGTTGGGGGCTCGGGGCAACTAGATGATGGTCAGCTGGTGCAGGAGCAGGACTCTCCTGATACTCCGCAGCTTCAAAGACATTGACACTACAATGGAAGAGAAGCGTTATTACAAAAACACTTACGGTAAGAGAAGCCATTTAGATATGATACGAACTTCTAACATTGAAGGCTCGTATATATAATGGCTCTTAAGGAATAATTAGATTAAAAAAAATTTGAAGTTGAAATAAAGAGGCAACTCACATACCAAATAAAGTAGAACAACAAATTTCTTAATTAGAATTTTAAAATAATTTAAATAGTAAAGAATTTTATTCTTCAAAATTTTTAATTTTTTTAAAAAAAAATTAAAAGAAAAAGAGAAAACATAGAAATGGAAAGTGGAAAAAGATGGGTATTAAACTACTCTTACATGATCAAAGGCTATAAAAAGATTCAACAAACATTCGTTTTTCATTTACAAAATTGGATAGGCTTGGTTCAACCATCATTTCATGTATTACAGGTTGATTCGGAAGGATCATTTGGAGTTTCAGAAGTGAATATTTGCACGGTGAAAGTAGTGGATGAAGTTGCAAGTATTATTTCATGAGTGGTTAGAAAACTTTATTTATTATTTTTAATTTCAAAATGTTTGTAATGGTCGAATGGTCAAATTGTCTTCGTGCATATTTAAGGGGATCGGAATTAAATCATAGTCACAAATATATTTTGTAGAGACACTATAAATACCCATAAATTATTACGTAAAAATTAGATTTGTGATGAATGACATTGATCTCTCAGACATTCCCCTGAAAATTCGAGCACCATTTCTAAGTTTCAAGTCAGTCTCGTTATAAATGCAATCAAGTTAAATTGTAGAGTGATTCAATTTTAATGCAAGAGGTAATCTAATTCGAGCCTTATCTTTTAGTTGATACGAATTTTGTATAAAAATGTATTAATTTTCTAGATTCAAGGGTTTTTGCTTCAACAAAAACTTGGATGGACAATTATGATTGCCTTATCAGATCCCATATTGGTGGGAAGAAGGAAGTTATATAACTGGTCAAACCAGACAATATATGTTAGTAACGGACTTAGGTTGTTACAAATTGTGATATATTTATAAATATATTTTTTTCTTACTTAAATCAACCCTATTAAATAATAAATTTAATCCAACTAACTCGATTCATTCATGTTATTTCGGTCATTTATTCAAATTTTTGTTTCTAATAAAAAGTAAAATATATCATTTAATTACCTTCAAAGGTAAAATTAAGATATGCCATTCAATTTCATTTAAAGGCTTAAAATTTTATTTTTAAGTGATGTTGGATAATAAATAATTGGAAAAGTAATTATGGGTTCAAATTAAAGTATAATATATATATATATATATATATATAGTAAGAAAAAAATATATTTAAAAATTAATGATAATTCTCACGATCTTTTGAACAATATATATTTAACTTTTAAAGACGGGAGAGAGATTTTTCTTTTTTAGCTAAATAAGGTTGGTGACGGGGATTATATTTTTCCTTTCTCATTCCCACTCTTGTCCCCGCCAAATTTTTGTCGTATATATATATATATATATATATATATATATATATATATATATATATATATTTATTTGCATTCTATATGTTTCTTTCTTTACTTAGTTAGTAAGTAAATAAATGAATAAATATATATATTATATATATATATGTGTGTGAAATACTATTTTGTAATATTAAAATTTAGAAACTATGCAATTTTTTTTTTTTAAACTTAATTTTTTAAGATGATTTATTTTTTATTTAAATAGAATTTTTATTTTAAAATAAAAATTATCCACTTAAAAAATTGTTTAAAATTAATATTTTTATAAAAATATTTCAAAAAATGGAGAAAAAAATTAATATTTTCTTAGTTGACAATTATTGCCATTTCAAGAGGTATAAATTAATATATTGCCCTGAAAAACATGATATCATTTAGCTAGTGGTTAGCTTAGTCAACTATAAATTAATATTCCATTTTGACTTTTAAGGTCTATTTTCTCTAATTCCTTTTGGTTTTAGGTGAAATTACATTTAAATCCACTAATTTAGGATGTTTGGATAGGAAATTACTAATATTTTGGTTCGATTAAGGAGGATTGGAGCGGCGTTAGCTCGTTGATTAGCTTGAATTTCAAGTACGACACTCTCCTATTGGTTAATCGTGTTTTAAATACCTTTCCAACTATTAGATATGCATGCATTGGTTGATATATATGATATGTATACTTGTGACTTATATTAGGTGATTATTTAAGCATAAATTTGGAGGGAAAAACGAAATTAAATAGAAACCAGAAACCCATTAAATTGAAAGTTTGAATCTAAGATTCGTATAGGTTTGGGTGTTGTTTTGGTCATTTGGAGCACGTTTTAAGTTCATACGAGTAAGAACTATGCTATTGTGGTGTTTTGAGGAGCGAAAAAAATTTAAGTAACCCCAAATTCTTCGTGTGAACAAGATTTTCAGCCATTGCCCGAAGGAAAAATGTGATATGTGTGAGAGTGCATGCGTGTGGGGCGCTTGTGTTTGAGAGTGTGCAAGCGCACGAGAACACATGA ATGTTTAAAGTGGCTCAACGGGGGCGTAGTGAGGCGAAGGGGAAGGAGGGAGGTGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATTGGAGACTCACTCGACGGGGGAAGGTGGTGGGGAACCGGAGATTGGCTTGGTGGCTGATGGGGGATCGGAGACTCGCTTGACGGGGGAAGGGGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTTGACGGGGGAAAGGGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGGGGAAGGTGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGATGGGGGAAGGGGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGGGGAAGGTGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGATGGGGGAAGGGGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGAGGAAGCCATTGCCCGAAGGAAAAATGTGATATGTGTGAGAGTGCATGCGTGTGGGGCGCTTGTGTTTGAGAGTGTGCAAGCGCACGAGAACACATGA ATGTTTAAAGTGGCTCAACGGGGGCGTAGTGAGGCGAAGGGGAAGGAGGGAGGTGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATTGGAGACTCACTCGACGGGGGAAGGTGGTGGGGAACCGGAGATTGGCTTGGTGGCTGATGGGGGATCGGAGACTCGCTTGACGGGGGAAGGGGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTTGACGGGGGAAAGGGGTGGGGAACCGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGGGGAAGGTGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGATGGGGGAAGGGGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGGGGAAGGTGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGATGGGGGAAGGGGGTGGGGAACTGGAGATTGGCTCGGTGGCTGGTGGGGGATCGGAGACTCGCTCGACGGAGGAAGCCATTGCCCGAAGGAAAAATGTGATATGTGTGAGAGTGCATGCGTGTGGGGCGCTTGTGTTTGAGAGTGTGCAAGCGCACGAGAACACATGA MFKVAQRGRSEAKGKEGGGGEPEIGSVAGGGLETHSTGEGGGEPEIGLVADGGSETRLTGEGGGEPEIGSVAGGGSETRLTGERGGEPEIGSVAGGGSETRSTGEGGGELEIGSVAGGGSETRSMGEGGGELEIGSVAGGGSETRSTGEGGGELEIGSVAGGGSETRSMGEGGGELEIGSVAGGGSETRSTEEAIARRKNVICVRVHACGALVFESVQAHENT Homology
BLAST of Csor.00g297480 vs. NCBI nr
Match: KAG6573404.1 (hypothetical protein SDJN03_27291, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 407 bits (1047), Expect = 9.52e-143 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of Csor.00g297480 vs. NCBI nr
Match: XP_035684622.1 (mucin-2-like isoform X2 [Branchiostoma floridae]) HSP 1 Score: 91.3 bits (225), Expect = 4.94e-17 Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 0
BLAST of Csor.00g297480 vs. NCBI nr
Match: XP_035684621.1 (mucin-2-like isoform X1 [Branchiostoma floridae]) HSP 1 Score: 91.3 bits (225), Expect = 4.94e-17 Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 0
BLAST of Csor.00g297480 vs. NCBI nr
Match: XP_021774838.1 (glycine-rich cell wall structural protein 1-like [Chenopodium quinoa]) HSP 1 Score: 89.4 bits (220), Expect = 5.34e-17 Identity = 88/190 (46.32%), Postives = 115/190 (60.53%), Query Frame = 0
BLAST of Csor.00g297480 vs. NCBI nr
Match: GIL83059.1 (hypothetical protein Vretifemale_11871, partial [Volvox reticuliferus]) HSP 1 Score: 86.7 bits (213), Expect = 3.82e-16 Identity = 78/185 (42.16%), Postives = 94/185 (50.81%), Query Frame = 0
BLAST of Csor.00g297480 vs. ExPASy TrEMBL
Match: A0A7U9PGK6 (Uncharacterized protein OS=Clostridium sp. ASBs410 OX=1304866 GN=K413DRAFT_3978 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.13e-13 Identity = 92/194 (47.42%), Postives = 98/194 (50.52%), Query Frame = 0
BLAST of Csor.00g297480 vs. ExPASy TrEMBL
Match: A0A6P8U4U0 (asparagine-rich protein-like OS=Gymnodraco acuticeps OX=8218 GN=LOC117539947 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.66e-12 Identity = 80/175 (45.71%), Postives = 89/175 (50.86%), Query Frame = 0
BLAST of Csor.00g297480 vs. ExPASy TrEMBL
Match: A0A0K9S0I7 (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_012710 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.54e-10 Identity = 60/182 (32.97%), Postives = 107/182 (58.79%), Query Frame = 0
BLAST of Csor.00g297480 vs. ExPASy TrEMBL
Match: A0A1X2GXK7 (Uncharacterized protein (Fragment) OS=Hesseltinella vesiculosa OX=101127 GN=DM01DRAFT_1314437 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.48e-09 Identity = 52/132 (39.39%), Postives = 68/132 (51.52%), Query Frame = 0
BLAST of Csor.00g297480 vs. ExPASy TrEMBL
Match: A0A3Q7X8W5 (glycine-rich cell wall structural protein-like isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101503953 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.63e-09 Identity = 82/192 (42.71%), Postives = 86/192 (44.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|