Csor.00g292880 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g292880
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRoot phototropism protein 3-like isoform X1
LocationCsor_Chr10: 8689420 .. 8690598 (+)
RNA-Seq ExpressionCsor.00g292880
SyntenyCsor.00g292880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTTTTCGAAGTTTTGCAGGCACATTATGAAGAACGAGCATTTGGATCGAGTTACCGAAAAACAGAAAGCCGGGTTGTGACGACGAGTACACAAAACGAGATAAATCCGATGAAAAAGGAGGTTGAGACAATGAAAGGGCAGCATAATGACATTCAAACCTTGCCAGCGTATGGGAAATTATCTGTTTCAGATTCAACGATGACAAGTTTGGAAGCTTTTGTCTTGCTCCACTGTCGATTTGAACACATGTGCAGCCTTTTCTACAAGACATTCTTTGTTTTATCGCATGTTGTCGTGCATACGGTCCTGTCAAACCAAGACAGAAACATTCTGGTACGTTGCAGCTCTTACCTTATCTTGCACAGCATAAATTTCTTTGCTGGCATTCAAATACAATGCATTAACAGCTTGGCCAGCTGTTAATGAGCTGAACCAAACACCAAAAGTTTGAAATTTACAGCTTAAACATTGAAAGAAAACACTGTCATATCTCTAATCTAATCCTATATATACACCGAACGAGAGAGAGCTTCGGTTTGTAACCCGACTCTTGAGCGTTTTGCTGAAACTTACACAACTTTTGGACAGGTTTTTGGATCATTGGACAAATTCGAGTCGAGTTTTCCCTTTCTTACAGAAGGTCTAAAGATCTCAGAGTCTCGAGGCTTGGATGATCCAACATGTGGGAGGATCGATATGAAGGATAAAGAAGAGCTTATTAGTAGGATTTATGGAGGTGGTAACTATTGGCCATATCGGATGAAGTTGTCGACGGATCGGTTACGTTGGGATAGTCTCAAGATCTCGGAAGGCACGGAATTCGAGGAAATGATGTTGAGGAATATGAATGAAGGAAGCTATAGAGATTTGAATGAGATGATCCCTATTGAAATATCAATCTTTGATGTTGATATTTGTGAGACTTATAAGGTAAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTTTGGTTGGTGAGAAGTCGTCGAAGAAATATCAATCTTCGTTTGTTTATTCGATCGAGCCGTTTCGACACATTGTAAAGAAACGGGGTCTTGATTATGGACAAGAGATCGGTTTGCGTTGGTCAGGTAGCAAAACGATTGATCGGTTCGATTTTTCGGTTTTGTCTTCTTCGAGGTTGAGTGTATACAACTTGATCTGA

mRNA sequence

ATGAATTTTTTCGAAGTTTTGCAGGCACATTATGAAGAACGAGCATTTGGATCGAGTTACCGAAAAACAGAAAGCCGGGTTGTGACGACGAGTACACAAAACGAGATAAATCCGATGAAAAAGGAGGTTGAGACAATGAAAGGGCAGCATAATGACATTCAAACCTTGCCAGCGTATGGGAAATTATCTGTTTCAGATTCAACGATGACAAGTTTGGAAGCTTTTGTCTTGCTCCACTGTCGATTTGAACACATGTGCAGCCTTTTCTACAAGACATTCTTTGTTTTATCGCATGTTGTCGTGCATACGGTCCTGTCAAACCAAGACAGAAACATTCTGGTTTTTGGATCATTGGACAAATTCGAGTCGAGTTTTCCCTTTCTTACAGAAGGTCTAAAGATCTCAGAGTCTCGAGGCTTGGATGATCCAACATGTGGGAGGATCGATATGAAGGATAAAGAAGAGCTTATTAGTAGGATTTATGGAGGTGGTAACTATTGGCCATATCGGATGAAGTTGTCGACGGATCGGTTACGTTGGGATAGTCTCAAGATCTCGGAAGGCACGGAATTCGAGGAAATGATGTTGAGGAATATGAATGAAGGAAGCTATAGAGATTTGAATGAGATGATCCCTATTGAAATATCAATCTTTGATGTTGATATTTGTGAGACTTATAAGGTAAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTTTGGTTGGTGAGAAGTCGTCGAAGAAATATCAATCTTCGTTTGTTTATTCGATCGAGCCGTTTCGACACATTGTAAAGAAACGGGGTCTTGATTATGGACAAGAGATCGGTTTGCGTTGGTCAGGTAGCAAAACGATTGATCGGTTCGATTTTTCGGTTTTGTCTTCTTCGAGGTTGAGTGTATACAACTTGATCTGA

Coding sequence (CDS)

ATGAATTTTTTCGAAGTTTTGCAGGCACATTATGAAGAACGAGCATTTGGATCGAGTTACCGAAAAACAGAAAGCCGGGTTGTGACGACGAGTACACAAAACGAGATAAATCCGATGAAAAAGGAGGTTGAGACAATGAAAGGGCAGCATAATGACATTCAAACCTTGCCAGCGTATGGGAAATTATCTGTTTCAGATTCAACGATGACAAGTTTGGAAGCTTTTGTCTTGCTCCACTGTCGATTTGAACACATGTGCAGCCTTTTCTACAAGACATTCTTTGTTTTATCGCATGTTGTCGTGCATACGGTCCTGTCAAACCAAGACAGAAACATTCTGGTTTTTGGATCATTGGACAAATTCGAGTCGAGTTTTCCCTTTCTTACAGAAGGTCTAAAGATCTCAGAGTCTCGAGGCTTGGATGATCCAACATGTGGGAGGATCGATATGAAGGATAAAGAAGAGCTTATTAGTAGGATTTATGGAGGTGGTAACTATTGGCCATATCGGATGAAGTTGTCGACGGATCGGTTACGTTGGGATAGTCTCAAGATCTCGGAAGGCACGGAATTCGAGGAAATGATGTTGAGGAATATGAATGAAGGAAGCTATAGAGATTTGAATGAGATGATCCCTATTGAAATATCAATCTTTGATGTTGATATTTGTGAGACTTATAAGGTAAAGTTGGTGAAAAAAGAGGCATTTTGGTTTGAACCATTGCCTTTGGTTGGTGAGAAGTCGTCGAAGAAATATCAATCTTCGTTTGTTTATTCGATCGAGCCGTTTCGACACATTGTAAAGAAACGGGGTCTTGATTATGGACAAGAGATCGGTTTGCGTTGGTCAGGTAGCAAAACGATTGATCGGTTCGATTTTTCGGTTTTGTCTTCTTCGAGGTTGAGTGTATACAACTTGATCTGA

Protein sequence

MNFFEVLQAHYEERAFGSSYRKTESRVVTTSTQNEINPMKKEVETMKGQHNDIQTLPAYGKLSVSDSTMTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFESSFPFLTEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSVYNLI
Homology
BLAST of Csor.00g292880 vs. NCBI nr
Match: KAG6590385.1 (hypothetical protein SDJN03_15808, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 620 bits (1598), Expect = 6.26e-224
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0

Query: 1   MNFFEVLQAHYEERAFGSSYRKTESRVVTTSTQNEINPMKKEVETMKGQHNDIQTLPAYG 60
           MNFFEVLQAHYEERAFGSSYRKTESRVVTTSTQNEINPMKKEVETMKGQHNDIQTLPAYG
Sbjct: 1   MNFFEVLQAHYEERAFGSSYRKTESRVVTTSTQNEINPMKKEVETMKGQHNDIQTLPAYG 60

Query: 61  KLSVSDSTMTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDK 120
           KLSVSDSTMTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDK
Sbjct: 61  KLSVSDSTMTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDK 120

Query: 121 FESSFPFLTEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRW 180
           FESSFPFLTEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRW
Sbjct: 121 FESSFPFLTEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRW 180

Query: 181 DSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEP 240
           DSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEP
Sbjct: 181 DSLKISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEP 240

Query: 241 LPLVGEKSSKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSR 300
           LPLVGEKSSKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSR
Sbjct: 241 LPLVGEKSSKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSR 300

Query: 301 LSVYNLI 307
           LSVYNLI
Sbjct: 301 LSVYNLI 307

BLAST of Csor.00g292880 vs. NCBI nr
Match: XP_022961362.1 (uncharacterized protein LOC111461952 [Cucurbita moschata])

HSP 1 Score: 482 bits (1241), Expect = 1.32e-170
Identity = 235/239 (98.33%), Postives = 238/239 (99.58%), Query Frame = 0

Query: 69  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFESSFPFL 128
           MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDR+ILVFGSLDKFESSFPFL
Sbjct: 1   MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFL 60

Query: 129 TEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG 188
           T+GL ISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG
Sbjct: 61  TKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG 120

Query: 189 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 248
           TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS
Sbjct: 121 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 180

Query: 249 SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSVYNLI 307
           SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFS+LSSSRLSVYNLI
Sbjct: 181 SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI 239

BLAST of Csor.00g292880 vs. NCBI nr
Match: XP_022968782.1 (uncharacterized protein LOC111467916 [Cucurbita maxima])

HSP 1 Score: 462 bits (1190), Expect = 7.48e-163
Identity = 229/239 (95.82%), Postives = 232/239 (97.07%), Query Frame = 0

Query: 69  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFESSFPFL 128
           MT LEAFVLL CRFEHMCSLFYKTFFVLSHVVVHTVLS+QDRNILVFGSLDKFESSFPFL
Sbjct: 1   MTCLEAFVLLQCRFEHMCSLFYKTFFVLSHVVVHTVLSSQDRNILVFGSLDKFESSFPFL 60

Query: 129 TEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG 188
           T+ L ISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISE 
Sbjct: 61  TKDLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISED 120

Query: 189 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 248
           TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS
Sbjct: 121 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 180

Query: 249 SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSVYNLI 307
            KKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLS+Y LI
Sbjct: 181 -KKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSLYTLI 238

BLAST of Csor.00g292880 vs. NCBI nr
Match: KGN66088.1 (hypothetical protein Csa_007428 [Cucumis sativus])

HSP 1 Score: 280 bits (717), Expect = 1.23e-91
Identity = 136/187 (72.73%), Postives = 152/187 (81.28%), Query Frame = 0

Query: 136 ESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMM 195
           + + LDDPTC R +MKDKEEL S IYGG NYWPYRMKL+TD+LRWDSLKISE  EFEE++
Sbjct: 2   QGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELL 61

Query: 196 LRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSK----- 255
            +NMNEGSYRDL EMIPIE+SI+DVDICET+KVKLVKKEAFWFEPLPLVGEKS K     
Sbjct: 62  SKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCS 121

Query: 256 -----------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSS 306
                      K +  FVYSIEPFRHI+KKRGLDY QEIG RWSGSK++DRFDFSVLSS 
Sbjct: 122 HATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSP 181

BLAST of Csor.00g292880 vs. NCBI nr
Match: TYK10230.1 (root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 296 bits (758), Expect = 7.75e-91
Identity = 172/319 (53.92%), Postives = 195/319 (61.13%), Query Frame = 0

Query: 15  AFGSSYRKTESRVV-----------TTSTQNEINPMKKEVETMKGQHNDIQTLPAYGKLS 74
           +FGS  R+  SRVV           T ++QNEIN MK+EV TMKGQ NDIQ         
Sbjct: 498 SFGSVDRQMRSRVVLGESKCPGTSWTLNSQNEINLMKREVATMKGQLNDIQ--------- 557

Query: 75  VSDSTMTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFES 134
                                MC                T L  Q +  L          
Sbjct: 558 ---------------------MCK---------------TKLQGQAKKGL---------- 617

Query: 135 SFPFLTEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSL 194
                 EG K   ++GLDDPTC R +MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSL
Sbjct: 618 ------EGKKC-RAKGLDDPTCWRSNMKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSL 677

Query: 195 KISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPL 254
           KISE  EFEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET++VKLVKKEAFWFEPLPL
Sbjct: 678 KISESKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPL 737

Query: 255 VGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKT 306
           VGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK 
Sbjct: 738 VGEKSKKDKFGSHSTAKLNGKSYKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKA 754

BLAST of Csor.00g292880 vs. ExPASy TrEMBL
Match: A0A6J1HA02 (uncharacterized protein LOC111461952 OS=Cucurbita moschata OX=3662 GN=LOC111461952 PE=4 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 6.38e-171
Identity = 235/239 (98.33%), Postives = 238/239 (99.58%), Query Frame = 0

Query: 69  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFESSFPFL 128
           MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDR+ILVFGSLDKFESSFPFL
Sbjct: 1   MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRDILVFGSLDKFESSFPFL 60

Query: 129 TEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG 188
           T+GL ISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG
Sbjct: 61  TKGLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG 120

Query: 189 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 248
           TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS
Sbjct: 121 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 180

Query: 249 SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSVYNLI 307
           SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFS+LSSSRLSVYNLI
Sbjct: 181 SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSSRLSVYNLI 239

BLAST of Csor.00g292880 vs. ExPASy TrEMBL
Match: A0A6J1HUG6 (uncharacterized protein LOC111467916 OS=Cucurbita maxima OX=3661 GN=LOC111467916 PE=4 SV=1)

HSP 1 Score: 462 bits (1190), Expect = 3.62e-163
Identity = 229/239 (95.82%), Postives = 232/239 (97.07%), Query Frame = 0

Query: 69  MTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFESSFPFL 128
           MT LEAFVLL CRFEHMCSLFYKTFFVLSHVVVHTVLS+QDRNILVFGSLDKFESSFPFL
Sbjct: 1   MTCLEAFVLLQCRFEHMCSLFYKTFFVLSHVVVHTVLSSQDRNILVFGSLDKFESSFPFL 60

Query: 129 TEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEG 188
           T+ L ISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISE 
Sbjct: 61  TKDLTISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISED 120

Query: 189 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 248
           TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS
Sbjct: 121 TEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKS 180

Query: 249 SKKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSVYNLI 307
            KKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLS+Y LI
Sbjct: 181 -KKYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSSRLSLYTLI 238

BLAST of Csor.00g292880 vs. ExPASy TrEMBL
Match: A0A0A0LWG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570130 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 5.97e-92
Identity = 136/187 (72.73%), Postives = 152/187 (81.28%), Query Frame = 0

Query: 136 ESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMM 195
           + + LDDPTC R +MKDKEEL S IYGG NYWPYRMKL+TD+LRWDSLKISE  EFEE++
Sbjct: 2   QGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELL 61

Query: 196 LRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSK----- 255
            +NMNEGSYRDL EMIPIE+SI+DVDICET+KVKLVKKEAFWFEPLPLVGEKS K     
Sbjct: 62  SKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCS 121

Query: 256 -----------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSS 306
                      K +  FVYSIEPFRHI+KKRGLDY QEIG RWSGSK++DRFDFSVLSS 
Sbjct: 122 HATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSP 181

BLAST of Csor.00g292880 vs. ExPASy TrEMBL
Match: A0A5D3CFT9 (Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003770 PE=3 SV=1)

HSP 1 Score: 296 bits (758), Expect = 3.75e-91
Identity = 172/319 (53.92%), Postives = 195/319 (61.13%), Query Frame = 0

Query: 15  AFGSSYRKTESRVV-----------TTSTQNEINPMKKEVETMKGQHNDIQTLPAYGKLS 74
           +FGS  R+  SRVV           T ++QNEIN MK+EV TMKGQ NDIQ         
Sbjct: 498 SFGSVDRQMRSRVVLGESKCPGTSWTLNSQNEINLMKREVATMKGQLNDIQ--------- 557

Query: 75  VSDSTMTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFES 134
                                MC                T L  Q +  L          
Sbjct: 558 ---------------------MCK---------------TKLQGQAKKGL---------- 617

Query: 135 SFPFLTEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSL 194
                 EG K   ++GLDDPTC R +MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSL
Sbjct: 618 ------EGKKC-RAKGLDDPTCWRSNMKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSL 677

Query: 195 KISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPL 254
           KISE  EFEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET++VKLVKKEAFWFEPLPL
Sbjct: 678 KISESKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPL 737

Query: 255 VGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKT 306
           VGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK 
Sbjct: 738 VGEKSKKDKFGSHSTAKLNGKSYKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKA 754

BLAST of Csor.00g292880 vs. ExPASy TrEMBL
Match: A0A5A7U6J2 (Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00030 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 1.04e-90
Identity = 171/319 (53.61%), Postives = 195/319 (61.13%), Query Frame = 0

Query: 15  AFGSSYRKTESRVV-----------TTSTQNEINPMKKEVETMKGQHNDIQTLPAYGKLS 74
           +FGS  R+  SRVV           T ++QNEIN MK+EV TMKGQ NDIQ         
Sbjct: 498 SFGSVDRQMRSRVVLGESKCPGTSWTLNSQNEINLMKREVATMKGQLNDIQ--------- 557

Query: 75  VSDSTMTSLEAFVLLHCRFEHMCSLFYKTFFVLSHVVVHTVLSNQDRNILVFGSLDKFES 134
                                MC                T L  Q +  L          
Sbjct: 558 ---------------------MCK---------------TKLQGQAKKGL---------- 617

Query: 135 SFPFLTEGLKISESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSL 194
                 EG K   ++GLDDPTC R +MKDKEEL S +YGG NYWPYRMKL+TD+LRWDSL
Sbjct: 618 ------EGKKC-RAKGLDDPTCWRSNMKDKEELASTLYGGSNYWPYRMKLTTDQLRWDSL 677

Query: 195 KISEGTEFEEMMLRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPL 254
           KISE  +FEE++ +NMNEGSYRDL EMIPIE+SI+DVDICET++VKLVKKEAFWFEPLPL
Sbjct: 678 KISESKQFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDICETFRVKLVKKEAFWFEPLPL 737

Query: 255 VGEKSSK----------------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKT 306
           VGEKS K                K +  FVYSIEPFRHI+KKRGLDY QEIGLRWSGSK 
Sbjct: 738 VGEKSKKDKFGSHSTAKLNGKSYKEKKEFVYSIEPFRHIIKKRGLDYQQEIGLRWSGSKA 754

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6590385.16.26e-224100.00hypothetical protein SDJN03_15808, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022961362.11.32e-17098.33uncharacterized protein LOC111461952 [Cucurbita moschata][more]
XP_022968782.17.48e-16395.82uncharacterized protein LOC111467916 [Cucurbita maxima][more]
KGN66088.11.23e-9172.73hypothetical protein Csa_007428 [Cucumis sativus][more]
TYK10230.17.75e-9153.92root phototropism protein 3-like isoform X1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A6J1HA026.38e-17198.33uncharacterized protein LOC111461952 OS=Cucurbita moschata OX=3662 GN=LOC1114619... [more]
A0A6J1HUG63.62e-16395.82uncharacterized protein LOC111467916 OS=Cucurbita maxima OX=3661 GN=LOC111467916... [more]
A0A0A0LWG55.97e-9272.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570130 PE=4 SV=1[more]
A0A5D3CFT93.75e-9153.92Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7U6J21.04e-9053.61Root phototropism protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g292880.m01Csor.00g292880.m01mRNA