Csor.00g290930 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g290930
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionprotein SENSITIVITY TO RED LIGHT REDUCED 1-like
LocationCsor_Chr04: 16665364 .. 16666197 (-)
RNA-Seq ExpressionCsor.00g290930
SyntenyCsor.00g290930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCGTCGGCAAAAACTCTTGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAGAATTTGCCGAAGCTAAGAAAACAAGAAGATCAGCGGACTTGGTCTCCGTCTGATCAGGCCAATGATACAATCAGGGAATCGAAACTGTCGCATAAGATGGAAATCTGTATTAAGAAAGTTGAGATCTCCCAATTTTATCGAACTCTTGTTGGTGAGCTTGAAACGATGCCAGTCTTGGAATCCTTGAATAGGGTTTTGGCCTCGGAGTCGAAGATGGGGATGGTTTTCTATGGCGTAGGAAGCATTGAAAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCTATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAAGTGTTCGATCCAATTCTTTCCGCAATCGAATGTCGGGTTATCGAATCCTTTGGTTGTTCTGTTCTATCAGTAAATGAGCAAGGACGGCGATGTGCGCAGAAGCCAACAATGTTCTTCATGCCCCATTGCGAGGCAGAGCTGTACAACAATCTTTTACAGGAGAATTGGACGGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTGTCTGAATTCAAGAACTCACCCGTTGTTGATTCGGCAAAGTACATCTTGGCCTCTAGAAAATTCTCACGCGAGATCAAAATCAAGACACTTTCAGATGAATATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTTTTTTACCGACAGAGCTGCAGTTCACAGATCTTTGA

mRNA sequence

ATGGCAGCGTCGGCAAAAACTCTTGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAGAATTTGCCGAAGCTAAGAAAACAAGAAGATCAGCGGACTTGGTCTCCGTCTGATCAGGCCAATGATACAATCAGGGAATCGAAACTGTCGCATAAGATGGAAATCTGTATTAAGAAAGTTGAGATCTCCCAATTTTATCGAACTCTTGTTGGTGAGCTTGAAACGATGCCAGTCTTGGAATCCTTGAATAGGGTTTTGGCCTCGGAGTCGAAGATGGGGATGGTTTTCTATGGCGTAGGAAGCATTGAAAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCTATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAAGTGTTCGATCCAATTCTTTCCGCAATCGAATGTCGGGTTATCGAATCCTTTGGTTGTTCTGTTCTATCAGTAAATGAGCAAGGACGGCGATGTGCGCAGAAGCCAACAATGTTCTTCATGCCCCATTGCGAGGCAGAGCTGTACAACAATCTTTTACAGGAGAATTGGACGGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTGTCTGAATTCAAGAACTCACCCGTTGTTGATTCGGCAAAGTACATCTTGGCCTCTAGAAAATTCTCACGCGAGATCAAAATCAAGACACTTTCAGATGAATATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTTTTTTACCGACAGAGCTGCAGTTCACAGATCTTTGA

Coding sequence (CDS)

ATGGCAGCGTCGGCAAAAACTCTTGCTATTCCGGATCAGTCGAATAATGGCGACTGGACGGTTGTTTTACCTCGTCGTGGCAGGCAGAGGAAGAATTTGCCGAAGCTAAGAAAACAAGAAGATCAGCGGACTTGGTCTCCGTCTGATCAGGCCAATGATACAATCAGGGAATCGAAACTGTCGCATAAGATGGAAATCTGTATTAAGAAAGTTGAGATCTCCCAATTTTATCGAACTCTTGTTGGTGAGCTTGAAACGATGCCAGTCTTGGAATCCTTGAATAGGGTTTTGGCCTCGGAGTCGAAGATGGGGATGGTTTTCTATGGCGTAGGAAGCATTGAAAATTATGAAAATCCTCGATTGCAGCTCAGTCTTGCTATATTGTTGAAGAGAAAATTTAGTTGGATTGGAAGTTTAGAAGTGTTCGATCCAATTCTTTCCGCAATCGAATGTCGGGTTATCGAATCCTTTGGTTGTTCTGTTCTATCAGTAAATGAGCAAGGACGGCGATGTGCGCAGAAGCCAACAATGTTCTTCATGCCCCATTGCGAGGCAGAGCTGTACAACAATCTTTTACAGGAGAATTGGACGGTGGAGCTGTTGAATCATGTTGTGCTGTTTGGAAATAGCTTTGAGATCTATGAGCAGTTTGTGTCTGAATTCAAGAACTCACCCGTTGTTGATTCGGCAAAGTACATCTTGGCCTCTAGAAAATTCTCACGCGAGATCAAAATCAAGACACTTTCAGATGAATATTTTGGTGCTTTCCATGATTCAAGTTGGCATTTTTTCAGCCCTTTTTTACCGACAGAGCTGCAGTTCACAGATCTTTGA

Protein sequence

MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKLSHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFSREIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL
Homology
BLAST of Csor.00g290930 vs. ExPASy Swiss-Prot
Match: Q8GWZ6 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SRR1 PE=2 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-73
Identity = 137/267 (51.31%), Postives = 195/267 (73.03%), Query Frame = 0

Query: 10  IPDQSNNGDWTVVLP---RRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKLSHKMEI 69
           + + S++G+W VVLP   R+GR+RK  PK + +E+++ W   D   D  R+++L  KMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLA 129
            +KK+E S FY   + +L++  V   +  VL SE+++ MV YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSA E   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFSREIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ + K I+A+++ + E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDEYFGAFHDSSWHFFSPFLPTEL 273
           +T SD+YF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

BLAST of Csor.00g290930 vs. ExPASy Swiss-Prot
Match: Q8K2M3 (SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4)

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-19
Identity = 73/216 (33.80%), Postives = 109/216 (50.46%), Query Frame = 0

Query: 19  WTVVLPRRGRQRKNLPKLRKQEDQRTWSPSD---------QANDTIR-----ESKLSHKM 78
           W+ V PRR R+R    + R  E  R    +D         +A + +R      S L    
Sbjct: 9   WSAVAPRR-RKRAAGRRPRPGEGPRAEPEADGEAVLRRLREAEEDLRISDFCSSALETIT 68

Query: 79  EICIKKVEISQFYRTLVGELETMPVLESLNR--VLASESKMGMVFYGVGSIENYENPRLQ 138
           E   K++E  Q     +G L     L S ++  + +S S +  V YG+G+  +    R+Q
Sbjct: 69  ECLRKQLEQLQPLTEALGRLHLGSSLPSASQEPLASSASHVKCVCYGLGTFASCPTARIQ 128

Query: 139 LSLAILLKRKFSWIGS-LEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQ-KPTMFFM 198
           L+  +L   K     S   V+DP+ S  E  V+ S G +VLS NE+G+R  Q +PT+F+M
Sbjct: 129 LAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQGQPTVFYM 188

Query: 199 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQ 217
           PHC   LYNNLL  NW+ + L+ V++ GNSF   E+
Sbjct: 189 PHCGTALYNNLLWSNWSADALSRVLIIGNSFRGLEE 223

BLAST of Csor.00g290930 vs. ExPASy Swiss-Prot
Match: Q9UH36 (SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-18
Identity = 61/164 (37.20%), Postives = 93/164 (56.71%), Query Frame = 0

Query: 106 VFYGVGSIENYENPRLQLSLAILLKRKFSWIGS-LEVFDPILSAIECRVIESFGCSVLSV 165
           V YG+G+       R QL+  +LL  K     S   V+DP+ S +E  V+ + G +VLS 
Sbjct: 142 VCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSE 201

Query: 166 NEQGRRCAQ-KPTMFFMPHCEAELYNNLLQENWTVELLNHVVLFGNSFE-IYEQFVSEF- 225
           NE+G+R  + +PT+F+M HC   LYNNLL  NW+V+ L+ +V+ GNSF+ + E+ ++   
Sbjct: 202 NEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARIL 261

Query: 226 -KNSPVVDSAKYILASRKFSREIKIKTLSDEYFGAFHDSSWHFF 265
            KN P      YI    K   E++    S +Y   F+D+S H+F
Sbjct: 262 QKNYP------YIAKILKGLEELEFPQTS-QYMDIFNDTSVHWF 298

BLAST of Csor.00g290930 vs. ExPASy Swiss-Prot
Match: Q9VEB5 (SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 58/204 (28.43%), Postives = 89/204 (43.63%), Query Frame = 0

Query: 14  SNNG-DWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQAND--TIRESKLSHKME-ICIK 73
           SN+G D+ VV  ++   RK L     +   R  S SD   D   +   K   ++E +C +
Sbjct: 2   SNSGEDFQVVTRKKWMARKCL-----RRRDRHKSESDYLIDCPDVNVEKFQPRLENLCTE 61

Query: 74  KVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLAILL 133
             +   F   LV        LE + + L       +V  G+G      +   Q +  I L
Sbjct: 62  MCQSDYF---LVAMEALQQQLEGIRKPLER-----IVCLGLGPFSRTYHALHQAAFVIGL 121

Query: 134 KRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEAELYN 193
            R    I     FDP+    E  +I  F   ++S +  G+  A  PT++++PHC   L +
Sbjct: 122 HRHHK-IREALYFDPVFRDSEKELIRLFDGCIMSKDCAGKHEATVPTLYYLPHCPYALMH 181

Query: 194 NLLQENWTVELLNHVVLFGNSFEI 214
           N+L  NW  E L +V L  NSFE+
Sbjct: 182 NILWSNWKRETLPNVFLISNSFEM 191

BLAST of Csor.00g290930 vs. NCBI nr
Match: KAG6601957.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 556 bits (1432), Expect = 1.24e-199
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
           SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR
Sbjct: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277

BLAST of Csor.00g290930 vs. NCBI nr
Match: KAG7032652.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553 bits (1426), Expect = 1.02e-198
Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
            HKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR
Sbjct: 61  LHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277

BLAST of Csor.00g290930 vs. NCBI nr
Match: XP_023553043.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP_023553053.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532 bits (1371), Expect = 2.46e-190
Identity = 266/277 (96.03%), Postives = 268/277 (96.75%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           M ASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL
Sbjct: 1   MTASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
            HKMEICI+KVE SQFYRTLV ELETMPVLESLNRVLASESKMGMV YGVGSIENYENPR
Sbjct: 61  LHKMEICIEKVESSQFYRTLVDELETMPVLESLNRVLASESKMGMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSAIECRVIESFGCS+LSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECRVIESFGCSILSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENWT ELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS
Sbjct: 181 PHCEAELYNNLLQENWTGELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSDEYFGAFHDSSWHFFS  LPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGAFHDSSWHFFSTVLPTELQFTDL 277

BLAST of Csor.00g290930 vs. NCBI nr
Match: XP_022964146.1 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata] >XP_022964155.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata] >XP_022964166.1 protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata])

HSP 1 Score: 525 bits (1353), Expect = 1.22e-187
Identity = 266/277 (96.03%), Postives = 268/277 (96.75%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
            HKMEICIKKVE SQFYRTLV ELE MPVLESLNRVLASESKMGMVFYGVGSIENYENPR
Sbjct: 61  LHKMEICIKKVESSQFYRTLVDELEMMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSAIEC+VIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECQVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELY+NLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS
Sbjct: 181 PHCEAELYSNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSDEYFGA   SSWH FSPFLPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGA---SSWHVFSPFLPTELQFTDL 274

BLAST of Csor.00g290930 vs. NCBI nr
Match: KAG6579107.1 (Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506 bits (1302), Expect = 8.10e-180
Identity = 251/277 (90.61%), Postives = 261/277 (94.22%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK  PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
             KMEICIKKVE SQFYRTL+ EL T PVLESLNRVLASESKM MV YGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRV+ SFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMASFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKF+
Sbjct: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSD+YFGAFHDSSWHFFSP  PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

BLAST of Csor.00g290930 vs. ExPASy TrEMBL
Match: A0A6J1HK12 (protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464256 PE=3 SV=1)

HSP 1 Score: 525 bits (1353), Expect = 5.92e-188
Identity = 266/277 (96.03%), Postives = 268/277 (96.75%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL
Sbjct: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
            HKMEICIKKVE SQFYRTLV ELE MPVLESLNRVLASESKMGMVFYGVGSIENYENPR
Sbjct: 61  LHKMEICIKKVESSQFYRTLVDELEMMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIG LEVFDPILSAIEC+VIESFGCSVLSVNEQGRRCAQKPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIGRLEVFDPILSAIECQVIESFGCSVLSVNEQGRRCAQKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELY+NLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS
Sbjct: 181 PHCEAELYSNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSDEYFGA   SSWH FSPFLPTELQFTDL
Sbjct: 241 REIKIKTLSDEYFGA---SSWHVFSPFLPTELQFTDL 274

BLAST of Csor.00g290930 vs. ExPASy TrEMBL
Match: A0A6J1FGU7 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita moschata OX=3662 GN=LOC111445349 PE=3 SV=1)

HSP 1 Score: 504 bits (1298), Expect = 1.60e-179
Identity = 250/277 (90.25%), Postives = 261/277 (94.22%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKTLA+PDQSNNGDWTVVLPRRGRQRK  PKLR +EDQRTWSP+DQAND IRESKL
Sbjct: 1   MAASAKTLAVPDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDAIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
             KMEICIKKVE SQFYRTL+ EL T PVLESLNRVLASESKM MV YGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNRVLASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRV+ESFGCSVLSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSVLSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELY+NLLQENWTVELLNHVVLFGNSFEIYEQFVSEFK+SPVVDSAKYILASRKF+
Sbjct: 181 PHCEAELYDNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSD+YFGAFHDSSWHFFSP  PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

BLAST of Csor.00g290930 vs. ExPASy TrEMBL
Match: A0A6J1JWJ0 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita maxima OX=3661 GN=LOC111488981 PE=3 SV=1)

HSP 1 Score: 494 bits (1271), Expect = 2.08e-175
Identity = 245/277 (88.45%), Postives = 257/277 (92.78%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAK LA+ DQSNNGDWTVVLPRRGRQRK  PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 1   MAASAKNLAVLDQSNNGDWTVVLPRRGRQRKTFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
             KMEICIKKVE SQFYRTL+ EL T PVLESLN+ LASESKM MV YGVGSIENYENPR
Sbjct: 61  LQKMEICIKKVESSQFYRTLIDELGTTPVLESLNKALASESKMEMVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWIGSLEVFDPILSA ECRV+ESFGCS+LSVNE+GRRCAQK T+FFM
Sbjct: 121 LQLSLAILLKRKFSWIGSLEVFDPILSATECRVMESFGCSILSVNEEGRRCAQKATLFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEA LYNNLLQENWTVELLNHVVLFGNSFEIY QFVSEFK+SPVVDSAKYILASRKF+
Sbjct: 181 PHCEAGLYNNLLQENWTVELLNHVVLFGNSFEIYGQFVSEFKSSPVVDSAKYILASRKFT 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKTLSD+YFGAFHDSSWHFFSP  PTELQFTDL
Sbjct: 241 REIKIKTLSDDYFGAFHDSSWHFFSPVSPTELQFTDL 277

BLAST of Csor.00g290930 vs. ExPASy TrEMBL
Match: A0A5A7VEC7 (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00470 PE=3 SV=1)

HSP 1 Score: 490 bits (1262), Expect = 4.89e-174
Identity = 240/277 (86.64%), Postives = 259/277 (93.50%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKT+AIPDQSNNGDWTVVLPRRG+QRKN PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
             KME+CIKK+E SQFYRTLV ELET+P LESLNRVL SESKMG+V YGVGSIENYENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSA ECR++ESFGCSVLSVNEQGRRCA+KPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENW V+LLNH++LFGNSFEIYEQFVSEFKNSPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKT+SD+YFGAFHDSSWHFFSP  P EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

BLAST of Csor.00g290930 vs. ExPASy TrEMBL
Match: A0A1S3CQQ4 (protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC103503243 PE=3 SV=1)

HSP 1 Score: 490 bits (1262), Expect = 4.89e-174
Identity = 240/277 (86.64%), Postives = 259/277 (93.50%), Query Frame = 0

Query: 1   MAASAKTLAIPDQSNNGDWTVVLPRRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKL 60
           MAASAKT+AIPDQSNNGDWTVVLPRRG+QRKN PKLR +EDQRTWSP+DQANDTIRESKL
Sbjct: 1   MAASAKTVAIPDQSNNGDWTVVLPRRGKQRKNFPKLRNREDQRTWSPTDQANDTIRESKL 60

Query: 61  SHKMEICIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPR 120
             KME+CIKK+E SQFYRTLV ELET+P LESLNRVL SESKMG+V YGVGSIENYENPR
Sbjct: 61  LQKMEMCIKKLESSQFYRTLVEELETVPFLESLNRVLDSESKMGVVIYGVGSIENYENPR 120

Query: 121 LQLSLAILLKRKFSWIGSLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFM 180
           LQLSLAILLKRKFSWI SLEVFDPILSA ECR++ESFGCSVLSVNEQGRRCA+KPTMFFM
Sbjct: 121 LQLSLAILLKRKFSWIESLEVFDPILSATECRLMESFGCSVLSVNEQGRRCAEKPTMFFM 180

Query: 181 PHCEAELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFS 240
           PHCEAELYNNLLQENW V+LLNH++LFGNSFEIYEQFVSEFKNSPVVDS+ +ILASRKF 
Sbjct: 181 PHCEAELYNNLLQENWKVKLLNHIMLFGNSFEIYEQFVSEFKNSPVVDSSNFILASRKFV 240

Query: 241 REIKIKTLSDEYFGAFHDSSWHFFSPFLPTELQFTDL 277
           REIKIKT+SD+YFGAFHDSSWHFFSP  P EL+F DL
Sbjct: 241 REIKIKTVSDDYFGAFHDSSWHFFSPVSPLELKFIDL 277

BLAST of Csor.00g290930 vs. TAIR 10
Match: AT5G59560.1 (sensitivity to red light reduced protein (SRR1) )

HSP 1 Score: 277.3 bits (708), Expect = 1.3e-74
Identity = 137/267 (51.31%), Postives = 195/267 (73.03%), Query Frame = 0

Query: 10  IPDQSNNGDWTVVLP---RRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKLSHKMEI 69
           + + S++G+W VVLP   R+GR+RK  PK + +E+++ W   D   D  R+++L  KMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLA 129
            +KK+E S FY   + +L++  V   +  VL SE+++ MV YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSA E   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFSREIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ + K I+A+++ + E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDEYFGAFHDSSWHFFSPFLPTEL 273
           +T SD+YF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

BLAST of Csor.00g290930 vs. TAIR 10
Match: AT5G59560.2 (sensitivity to red light reduced protein (SRR1) )

HSP 1 Score: 277.3 bits (708), Expect = 1.3e-74
Identity = 137/267 (51.31%), Postives = 195/267 (73.03%), Query Frame = 0

Query: 10  IPDQSNNGDWTVVLP---RRGRQRKNLPKLRKQEDQRTWSPSDQANDTIRESKLSHKMEI 69
           + + S++G+W VVLP   R+GR+RK  PK + +E+++ W   D   D  R+++L  KMEI
Sbjct: 5   VKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEI 64

Query: 70  CIKKVEISQFYRTLVGELETMPVLESLNRVLASESKMGMVFYGVGSIENYENPRLQLSLA 129
            +KK+E S FY   + +L++  V   +  VL SE+++ MV YG+GSIE+YE+PR QLS+A
Sbjct: 65  SLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIA 124

Query: 130 ILLKRKFSWIG-SLEVFDPILSAIECRVIESFGCSVLSVNEQGRRCAQKPTMFFMPHCEA 189
           IL+KR+F W+G ++EVFDP+LSA E   +ES GCSVLSVNEQ RR A KPT+FFMPHCEA
Sbjct: 125 ILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEA 184

Query: 190 ELYNNLLQENWTVELLNHVVLFGNSFEIYEQFVSEFKNSPVVDSAKYILASRKFSREIKI 249
            LY+NLLQ NW ++ L+ + LFGNSF++YE+ VS   ++ V+ + K I+A+++ + E  I
Sbjct: 185 NLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVS--FDAEVICATKRIIAAQRVTSEFAI 244

Query: 250 KTLSDEYFGAFHDSSWHFFSPFLPTEL 273
           +T SD+YF AFHDSSWHFFS  + +EL
Sbjct: 245 ETESDDYFAAFHDSSWHFFSSGIDSEL 269

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8GWZ61.9e-7351.31Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
Q8K2M32.0e-1933.80SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4[more]
Q9UH362.9e-1837.20SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1[more]
Q9VEB51.0e-0728.43SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
KAG6601957.11.24e-199100.00Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs... [more]
KAG7032652.11.02e-19899.64Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs... [more]
XP_023553043.12.46e-19096.03protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022964146.11.22e-18796.03protein SENSITIVITY TO RED LIGHT REDUCED 1-like [Cucurbita moschata] >XP_0229641... [more]
KAG6579107.18.10e-18090.61Protein SENSITIVITY TO RED LIGHT REDUCED 1, partial [Cucurbita argyrosperma subs... [more]
Match NameE-valueIdentityDescription
A0A6J1HK125.92e-18896.03protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FGU71.60e-17990.25protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1JWJ02.08e-17588.45protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A5A7VEC74.89e-17486.64Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3CQQ44.89e-17486.64protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cucumis melo OX=3656 GN=LOC1035032... [more]
Match NameE-valueIdentityDescription
AT5G59560.11.3e-7451.31sensitivity to red light reduced protein (SRR1) [more]
AT5G59560.21.3e-7451.31sensitivity to red light reduced protein (SRR1) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012942SRR1-like domainPFAMPF07985SRR1coord: 105..157
e-value: 6.9E-10
score: 38.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..53
NoneNo IPR availablePANTHERPTHR28626:SF3SRR1-LIKE PROTEINcoord: 14..265
IPR040044SRR1-like proteinPANTHERPTHR28626SRR1-LIKE PROTEINcoord: 14..265

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g290930.m01Csor.00g290930.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus