Csor.00g290070 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g290070
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	CENP-V/GFA domain-containing protein
Location	Csor_Chr04: 17312632 .. 17317965 (+)
RNA-Seq Expression	Csor.00g290070
Synteny	Csor.00g290070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCTCACCTGTCACCTGTCCTAGATAAATATCTCAGTGTTGATCAACGAACTATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAAGAAGTTTGATGGCAAAAATTGGGAGGCAGCTCATCGTCGTCGACAATAATCAGTGTGTTCTCGTGGGAGAGGGAGTATCTATACTTCTGAATCGATAGAATGAGTATTTTAAGCCTTCATAGATGAAGGAGATAAAAACAAGATACAAAAGATCTTCGAGATTCAACTTGAAGATAAAGAACAAAAGAGCACGTTGATTTGGGATCAGAGGATTGATACCCGTTGTTAGCTCTAATACTAATGTTTAGAATCACTCAACAATGCACACACACGTCAAGATGAACAGCAGAGAGAAAATACAATGAAGAATATTGGTTAAACGTTTTATTATTGATAACTTCAGTTATGTACAACAAGAAAATAGACAATGAAGAAAAGTGCTAGCACTAACTAATATAATCTAACAAATATATCTCTATCAAATTTTACCAAATATCTATCATATCTTTACGAAATATCTTTCAATTATATCAAATTTAGGCATTAGGCTCCATATCTCGACCAGCATAATAAGTATGTCGGAGTCATTTCATGACATTTTCTTTTAAGTGACTGTGGTAGAACCTACATTTCCAAAAAATGGGAATTATTATTAATTTAACCTCAACTTTATTTCATTCCTATGAAATTTAAATATGTATATGTATAATGGAATATAAATTAAATGATAGTGTAAGATAATAACTTATAACATAGAACATGTTCATAATTTAATTAACAATGGTTAGAGATTCAAGTGATAACTTTATGTCTTCTGACACTTAAAAAAAAAAATAATAAATAAAATAAAATAATCGGGGACTCGAACAATTTGGTACCCCTTCTTGAAACGACGTCGACCTTGTATAAATTCTATAAATGTGTGACTCCGAAATTTAATAAGATTGGAAAAGCATAGCCCCCTGGCATGCATTTACCAACATTTCCACCACCTTTTATATATATGTGTATATGCCCTGTGACGCACACCCCCTTGCCCTCCCAACTCTCACCTTCTAATAATATATTAAACCTATGCTCAAGTTAGGTCTTCATCAAATGTCTTTGTTTCTTCCTTAAAAAACTTCTCATTTTTCGGTGCTCCAAATTCAAAATCATTGTAAAGGTACCGTGACTCTCCTCCGACATTGTTCAAGAACATGATCTCACACTCATAGACAGACTTTTGTAAAGAATCCCTATTCAAATAGAGAATAGGACAGTGAGTTAGGGAGATATGCTGATAGTGAGAATTATACTCTCTGTCGTGCGAGGATAGAGATTAAAATAAGAGATAAGGATGAAGAATGCTTCGTATCTCCGTTTTGTGGACACTTCTATACAGAAACGATTCTTCGTACCTGAGTTGAGTTGGGCTGTAATAATATAACAAGTTTATGAGATAGCCATTTCGCGAGAACCGACCTCCCATGGCTTCTATCCTAATTAATTAGAGGGTGGAAGAATGAGTCAATGCATTGTCATCCTTATTAATTAGCCTTCTTCCATGGCTTCTATCAATTCTATAAGCTACCAAACCTTATCTACTTTTCATCATTAATTTTTTATGCACGTTTCGCATAGTCTTAGGATATATATATTATATAGTACTCTCAGACTATACCTCTCATTTAAAAAATTATCAATAAACATTTCAAGCCCTTCGTGGGTAGATATTGTCTTCTTTCAGACTTCCACTTAATGCTAGGGGAGGTTTTCATACCTTACGAACTTTATAAGGAATGTTTCGTGCTCCTCCCCGACTAATATGGGATCTCACAATCCACCGCCTTCAAGGTCCAACGTCCTCGCTGACACTCGTATTCCTCTCCAATCGATGAGGGGTCTTACAGTCCACCCACCTTCGAGACCCAGCGTCCTCACTGACACTCGTGCCCCTCTCCAATCGATGTAAGATCTCACAAGATCAAATACGTTAGAATGTTGGATGAAAAATCGACATGGTAATAACTAAGACACTAACCTAGATTAAGCCTAAATGAATGATGTTGTGTCACGTCAACTTTTGAACTAACATTGTAACGAACTTGCTACTATAAACGTAGTTTTGAAATGTTTATAAAAAGTCAAGGTTAATATTGCAACTTTTGAAAGAAAAAGAATATTTGTAAGGCTCGAGTAAAAATGGATACATGAATGAACCAAACCAGGAGGAGGGTTAATTTATTATTTATGAACAGTAGTGGGCATGGCCGTCCAAACTAAATTAGAATGCCCATTTTCTTAATTAATCTTCCACTAATTACAATTAACGTATAATTATAATACGTATTATTTGTCAATGAATTTTCATGACCTGGCACTCACCCAATAAAAACAAAGCCAAGTGGCAACTAGCCAGTCAGCAATGTGCTGTGTCATTTCCAATTGTAATATTTTAATTTCTGAATTATTATTATTATTATTATTATCTAATGCCTTGTTTTTCCATTGGCTTGCTTTTTTCAGGTCATGTGGTTTTGTTTAATTTTTGTGGGTGGTCAAATGTGAACCACTAATTATATTTGGCTTTTCAATTTCTTAACCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAATAATAATAATAATAATAATAAATAAATAAATTAAGCCTTTTATTATCTTTCAAAAATAAAAATAAAAAAATTAAATTAACAAAAATACTGTTTGGAGTGAAAGTACATTAATACCCTTGAAAAAAAATTAAAAGTTTAAATCTTTTTTTATCGTTAGTACCCTTGAAATTGAAGGGAAAAATGATTTATGAGAGGTAAATAAATTGTTATTTATATATTACAATAATATATTTTTTTTATATATATAAAAGTTAAAAGGTTATAAGGGTATTTTTGAAATAATATCCAATTAAATATTTTTATTATTTTTTTTAATTTCAAATTATTATCTAAATTTTTAAAAGTTACTGTAATTTTTTTTATATTAACTCCTTAAAAAAATGAGTTAGTTTTTGAATTTGAGAATAAAATGATTTTTCAGGTTTATTATTTTAAAAATTAATATACAATCCCTTGTAACACTAAATTCTAATACAATTAATTAAAAAAAAAAAAACTACAATAACAGCAAATATAACACGTAGCACGACATGTTTCAAATTAAATTCCGTAATATGTGACATATAAAAACAAGATCATGTGCAACTTTACTCATAATTTAATCGTTTAAAGAGAAAGAGTACGACAATATATTATGGTATATGGTCCACCAGTTCGTAAGAGTTGTGGCTTACGACAAATTATGAGAGTAAGTTTAACTAATGGTGTAGTAATAGAAGCTTGAATTTTGTTGGTCAGCCTCGATCATTGAAGCTTGAATTCTGTTTAGGTTGGAGCTTTGTAAACACACCTTGGTCGTGAACTTTCAGGCTCTACCACATTGACTCTGGTTAGGGTAAACTTTAAATTTTTTAACATATAATTCATTGTTTTAGATAGAAGCGTGCTTGAGGCACCCGTACGTTTTATGTTGTACATGGGTTGGTTGAGCTGAGCTCAATGGACTTCGTTGATTTGGAGACTTATTGATGCGAAAACCCTAAATCCCTAAATCACAACCGTTAAAAACTTACGGATCAAGATAATTTCATTTCAAATAATATAAAACTCTCATAAATAGAATTCCGACATCCTACCATTTTTAAAATATCTCCGTCCTTTTTTTTTTAATTAGTTAAAACAATAGGTTAATATTTATTTATTTTATGATCGCAAAAACAATATATATATTTCGCGAATATATATATATTAAAATTTCAATTAAAAATAAAATTTTTAATTAAATTAATATTATCTATCATAATTAAAAATAGTGCCATAATATCATCCATCGTAATTAAGACAGTGTCATATGTGTATTTCTTTTATCATAATTAAGACAGTGTCTTTTGTGTCTTTTTTTTGTCTTCATATTTCATTTTCTTTGTCTTTATTTAAATTGTATATACAGTCAATTTAAATTAATATTATCTATTAGAATCTAAGACAGTGTCATATATGTATTTCTTTGTCTTATATGGCGATCAATATAGGAAGAATGTAGCATTAACGAAGTTTCAATTCCTTTTATAGTTATATTTTGTAACTCTTTATTTAATATTAACAAATAAATAACATAATTCATATAACACATAAGGTACGGCCAATATAGGAAGAAGGTAGCATTAACGGATTTTTAATTTCTTTTATAGATTTAATATTAACAAATAAATAACTATAAAAATTAAATTGAATAAAAGTAACAAATATTAATATAATTTTTATTATTTGATATCAACAAATAATTACCAATTACATCCATTAACAAAAAGATTAAAATATTTATTTTTCTAGAAAAATAAAAGCTAATATATATTTTTTAAAAAATAAATAGCAAAATATAATGAGAATGGATTGGCGATTATAATAATAGGAAAAAATGTACCCTAATCATAGCTATAAATTTCTAGCCCCAGTGGTCGCCAAGATGTCGATCACTTCGTTACGAATATTTCAAACAAAAAAAAAAAAAAAAATAATAATGATGATAATCTCTTTCTTCTTCATTTTATCCGATTTCCTCTTTTAATTTCTGCATTTTTTCTTTCCCGCTTCAGCCGCAAAGATCTCCGTGAAAATCTGACCTGCGTTTCTTCATTTTTCCAAAAGATTTCTCCTCGTTTTCCTCGTGATTCCATCTGTACAGACAATTTAAAGCTCTAAAGCTTTAAAGCGATCGAATCTGCACGGTTTGCTTTTTTCAACTTCATCTCTATTTCGTTTCATAATCCATGAACATCTCAACATCATTCACGAACCTTCTAGCTGAACATTCAAGTTCAGCGTATAATTTCGCCGTTTTTTCCTTTTCATTTTATTCTAGATTTAGATCTTCAACGTTTCACCTGTTCGAGCAAATGATGCAGGGAGAGCAACGAGTTGCGATTCAGGTCAAGTGA

mRNA sequence

ATGGCACCTCACCTGTCACCTGTCCTAGATAAATATCTCAGTGTTGATCAACGAACTATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAAGAACGATCGAATCTGCACGGGAGAGCAACGAGTTGCGATTCAGGTCAAGTGA

Coding sequence (CDS)

ATGGCACCTCACCTGTCACCTGTCCTAGATAAATATCTCAGTGTTGATCAACGAACTATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAAGAACGATCGAATCTGCACGGGAGAGCAACGAGTTGCGATTCAGGTCAAGTGA

Protein sequence

MAPHLSPVLDKYLSVDQRTMDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKNDRICTGEQRVAIQVK

Homology

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BLAST of Csor.00g290070 vs. ExPASy Swiss-Prot
Match: Q9CXS4 (Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-26
Identity = 54/106 (50.94%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 24  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 83
           +V H GGCHC  +R+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++T
Sbjct: 122 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAES-ITT 181

Query: 84  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHV 130
           YTF TH A HTFCK CG+ SFY  RS P G  +   C+D GT+  V
Sbjct: 182 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSV 226

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BLAST of Csor.00g290070 vs. ExPASy Swiss-Prot
Match: Q7Z7K6 (Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.9e-26
Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 24  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 83
           +V H GGCHC  +R+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++T
Sbjct: 145 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAE-HITT 204

Query: 84  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTL 127
           YTF TH A HTFCK CG+ SFY  RS P G  +   C+D GT+
Sbjct: 205 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTV 246

[Close]

BLAST of Csor.00g290070 vs. ExPASy Swiss-Prot
Match: A0A0U1RR11 (Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 24  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 83
           +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 84  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 133
           Y   TH A H+FC  CG+ SF+ + S P    V   C+D GT+  V I+
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIE 237

[Close]

BLAST of Csor.00g290070 vs. ExPASy Swiss-Prot
Match: P0DPI3 (Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 24  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 83
           +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 84  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 133
           Y   TH A H+FC  CG+ SF+ + S P    V   C+D GT+  V I+
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIE 237

[Close]

BLAST of Csor.00g290070 vs. ExPASy Swiss-Prot
Match: A0A0U1RRI6 (Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 24  MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 83
           +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V T
Sbjct: 145 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 204

Query: 84  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 133
           Y   TH A H+FC  CG+ SF+ + S P    V   C+D GT+  V I+
Sbjct: 205 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIE 252

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BLAST of Csor.00g290070 vs. NCBI nr
Match: KAG6602043.1 (Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318 bits (815), Expect = 7.51e-110
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MAPHLSPVLDKYLSVDQRTMDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRG 60
           MAPHLSPVLDKYLSVDQRTMDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRG
Sbjct: 1   MAPHLSPVLDKYLSVDQRTMDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRG 60

Query: 61  NTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRC 120
           NTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRC
Sbjct: 61  NTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRC 120

Query: 121 VDPGTLAHVEIKNDRICTGEQRVAIQVK 148
           VDPGTLAHVEIKNDRICTGEQRVAIQVK
Sbjct: 121 VDPGTLAHVEIKNDRICTGEQRVAIQVK 148

[Close]

BLAST of Csor.00g290070 vs. NCBI nr
Match: KAG7032737.1 (Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249 bits (635), Expect = 1.08e-82
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79
           MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK
Sbjct: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60

Query: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 132
           FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK
Sbjct: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 113

[Close]

BLAST of Csor.00g290070 vs. NCBI nr
Match: KAE8648420.1 (hypothetical protein Csa_007866 [Cucumis sativus])

HSP 1 Score: 208 bits (529), Expect = 3.90e-66
Identity = 91/109 (83.49%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 23  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVS 82
           +MV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  FKLLGDSD F+S
Sbjct: 6   EMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFKLLGDSDDFIS 65

Query: 83  TYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEI 131
           TYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVDPGTL HV+I
Sbjct: 66  TYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLDHVQI 114

[Close]

BLAST of Csor.00g290070 vs. NCBI nr
Match: KAA0062377.1 (centromere protein V isoform X5 [Cucumis melo var. makuwa] >TYK26602.1 centromere protein V isoform X5 [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (521), Expect = 2.94e-65
Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 23  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVS 82
           KMV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+S
Sbjct: 6   KMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFIS 65

Query: 83  TYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEI 131
           TYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVDPGTL HV+I
Sbjct: 66  TYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVQI 114

[Close]

BLAST of Csor.00g290070 vs. NCBI nr
Match: XP_022999779.1 (centromere protein V-like [Cucurbita maxima] >XP_022999780.1 centromere protein V-like [Cucurbita maxima] >XP_022999781.1 centromere protein V-like [Cucurbita maxima])

HSP 1 Score: 199 bits (507), Expect = 4.54e-63
Identity = 85/113 (75.22%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79
           MD ++V+H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  
Sbjct: 1   MDSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKN 60

Query: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 132
           F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+CVDPGTLA+VEI+
Sbjct: 61  FISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLAYVEIR 113

[Close]

BLAST of Csor.00g290070 vs. ExPASy TrEMBL
Match: A0A0A0KN47 (CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G410710 PE=3 SV=1)

HSP 1 Score: 208 bits (529), Expect = 8.59e-67
Identity = 91/109 (83.49%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 23  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVS 82
           +MV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  FKLLGDSD F+S
Sbjct: 6   EMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFKLLGDSDDFIS 65

Query: 83  TYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEI 131
           TYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVDPGTL HV+I
Sbjct: 66  TYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLDHVQI 114

[Close]

BLAST of Csor.00g290070 vs. ExPASy TrEMBL
Match: A0A5A7V607 (Centromere protein V isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002330 PE=3 SV=1)

HSP 1 Score: 205 bits (521), Expect = 1.42e-65
Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 23  KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVS 82
           KMV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+S
Sbjct: 6   KMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFIS 65

Query: 83  TYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEI 131
           TYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVDPGTL HV+I
Sbjct: 66  TYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVQI 114

[Close]

BLAST of Csor.00g290070 vs. ExPASy TrEMBL
Match: A0A6J1KE30 (centromere protein V-like OS=Cucurbita maxima OX=3661 GN=LOC111494027 PE=3 SV=1)

HSP 1 Score: 199 bits (507), Expect = 2.20e-63
Identity = 85/113 (75.22%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79
           MD ++V+H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  
Sbjct: 1   MDSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKN 60

Query: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 132
           F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+CVDPGTLA+VEI+
Sbjct: 61  FISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLAYVEIR 113

[Close]

BLAST of Csor.00g290070 vs. ExPASy TrEMBL
Match: A0A6J1G4E1 (centromere protein V-like OS=Cucurbita moschata OX=3662 GN=LOC111450635 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 8.94e-63
Identity = 84/113 (74.34%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79
           MD ++V+H GGCHCK +RW VEA  SV AW+CNCSDC MR NTHF VP  RFKLLGDS  
Sbjct: 1   MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKN 60

Query: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 132
           F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+CVDPGTL HVEI+
Sbjct: 61  FISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIR 113

[Close]

BLAST of Csor.00g290070 vs. ExPASy TrEMBL
Match: A0A7N2KY42 (CENP-V/GFA domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 196 bits (498), Expect = 5.87e-62
Identity = 82/114 (71.93%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79
           MD + V+H GGCHC+++RW V+A  S+ AW+CNCSDC MR NTHF VPA RF+LLGDS++
Sbjct: 1   MDSETVVHNGGCHCRKVRWRVQAPTSIVAWDCNCSDCFMRANTHFIVPAERFELLGDSEQ 60

Query: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKN 133
           F++TYTFGTH A HTFCKVCGITSFY  RS PDGV++TFRCVDPGTL HVEIKN
Sbjct: 61  FLTTYTFGTHTAKHTFCKVCGITSFYFPRSNPDGVAITFRCVDPGTLTHVEIKN 114

[Close]

BLAST of Csor.00g290070 vs. TAIR 10
Match: AT5G16940.1 (carbon-sulfur lyases )

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-45
Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79
           M+ +++ H+GGCHC +I+W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKN 134
           F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +CV  GTLAH+E+K+
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKS 114

[Close]

BLAST of Csor.00g290070 vs. TAIR 10
Match: AT5G16940.2 (carbon-sulfur lyases )

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-45
Identity = 74/114 (64.91%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79
           M+ +++ H+GGCHC +I+W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKN 134
           F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +CV  GTLAH+E+K+
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKS 114

The following BLAST results are available for this feature:

BLAST of Csor.00g290070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CXS4	2.0e-26	50.94	Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2	[more]
Q7Z7K6	5.9e-26	51.46	Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1	[more]
A0A0U1RR11	1.3e-17	41.28	Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1	[more]
P0DPI3	1.3e-17	41.28	Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1	[more]
A0A0U1RRI6	1.3e-17	41.28	Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1	[more]

BLAST of Csor.00g290070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602043.1	7.51e-110	100.00	Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7032737.1	1.08e-82	100.00	Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAE8648420.1	3.90e-66	83.49	hypothetical protein Csa_007866 [Cucumis sativus]	[more]
KAA0062377.1	2.94e-65	82.57	centromere protein V isoform X5 [Cucumis melo var. makuwa] >TYK26602.1 centromer...	[more]
XP_022999779.1	4.54e-63	75.22	centromere protein V-like [Cucurbita maxima] >XP_022999780.1 centromere protein ...	[more]

BLAST of Csor.00g290070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN47	8.59e-67	83.49	CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G410710 ...	[more]
A0A5A7V607	1.42e-65	82.57	Centromere protein V isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1KE30	2.20e-63	75.22	centromere protein V-like OS=Cucurbita maxima OX=3661 GN=LOC111494027 PE=3 SV=1	[more]
A0A6J1G4E1	8.94e-63	74.34	centromere protein V-like OS=Cucurbita moschata OX=3662 GN=LOC111450635 PE=3 SV=...	[more]
A0A7N2KY42	5.87e-62	71.93	CENP-V/GFA domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of Csor.00g290070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16940.1	2.6e-45	64.91	carbon-sulfur lyases	[more]
AT5G16940.2	2.6e-45	64.91	carbon-sulfur lyases	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.170.150.70		coord: 27..140 e-value: 7.6E-23 score: 82.5
None	No IPR available	PANTHER	PTHR28620	CENTROMERE PROTEIN V	coord: 24..132
None	No IPR available	PANTHER	PTHR28620:SF9	CARBON-SULFUR LYASES	coord: 24..132
IPR006913	CENP-V/GFA domain	PFAM	PF04828	GFA	coord: 50..123 e-value: 4.8E-6 score: 26.8
IPR006913	CENP-V/GFA domain	PROSITE	PS51891	CENP_V_GFA	coord: 27..148 score: 21.143429
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 18..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g290070.m01	Csor.00g290070.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016846	carbon-sulfur lyase activity
molecular_function	GO:0046872	metal ion binding