Csor.00g287080 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g287080
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionZinc finger protein
LocationCsor_Chr14: 8023747 .. 8024106 (+)
RNA-Seq ExpressionCsor.00g287080
SyntenyCsor.00g287080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTGATGTCTGAGATGTCTCTGATGCATGAGATGTTTGAGATGCCTTTGATGTGTATGATGTCTCGGATGTCTGTGATATCTGCAATGTCTGAGATGTCTAAGATGTATGAGATGACTGAGATGTCTGAGAAGCCTCTGCTGTCTGTGATATCTGAGTTGCTTCTGATGTCTGAGATGTCTGAGATGCCTCTGATGTTTGGGAGGTCTAAGATGTCTGAACTGTCTATAATGTTTGAGATGTATGAGATGACTGAGATGTCTGTGATGTCTGTGATGTCTGAGTTGCTTCTAATGTCTGAGATGTCTGAGATGTATAAGATGTCTGAGATGTCTGAGATGCCTCTAATGTCTTAG

mRNA sequence

ATGTCTTTGATGTCTGAGATGTCTCTGATGCATGAGATGTTTGAGATGCCTTTGATGTGTATGATGTCTCGGATGTCTGTGATATCTGCAATGTCTGAGATGTCTAAGATGTATGAGATGACTGAGATGTCTGAGAAGCCTCTGCTGTCTGTGATATCTGAGTTGCTTCTGATGTCTGAGATGTCTGAGATGCCTCTGATGTTTGGGAGGTCTAAGATGTCTGAACTGTCTATAATGTTTGAGATGTATGAGATGACTGAGATGTCTGTGATGTCTGTGATGTCTGAGTTGCTTCTAATGTCTGAGATGTCTGAGATGTATAAGATGTCTGAGATGTCTGAGATGCCTCTAATGTCTTAG

Coding sequence (CDS)

ATGTCTTTGATGTCTGAGATGTCTCTGATGCATGAGATGTTTGAGATGCCTTTGATGTGTATGATGTCTCGGATGTCTGTGATATCTGCAATGTCTGAGATGTCTAAGATGTATGAGATGACTGAGATGTCTGAGAAGCCTCTGCTGTCTGTGATATCTGAGTTGCTTCTGATGTCTGAGATGTCTGAGATGCCTCTGATGTTTGGGAGGTCTAAGATGTCTGAACTGTCTATAATGTTTGAGATGTATGAGATGACTGAGATGTCTGTGATGTCTGTGATGTCTGAGTTGCTTCTAATGTCTGAGATGTCTGAGATGTATAAGATGTCTGAGATGTCTGAGATGCCTCTAATGTCTTAG

Protein sequence

MSLMSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEMPLMS
Homology
BLAST of Csor.00g287080 vs. NCBI nr
Match: XP_022932212.1 (uncharacterized protein LOC111438534 [Cucurbita moschata])

HSP 1 Score: 102 bits (255), Expect = 7.82e-25
Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 0

Query: 40  MTEMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELSIMFEMYEMTEMSV-----MSVM 99
           M EMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELS MFE+YEMTEMS      M +M
Sbjct: 1   MIEMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELSTMFEIYEMTEMSEKPLMSMPLM 60

Query: 100 SELLLMSEMSEMYKMSEMSEMPLMS 119
           SEL LMSEM EM+++SEM+ M +MS
Sbjct: 61  SELFLMSEMPEMHEISEMTLMCMMS 85

BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6603345.1 (hypothetical protein SDJN03_03954, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100 bits (248), Expect = 1.77e-23
Identity = 75/119 (63.03%), Postives = 87/119 (73.11%), Query Frame = 0

Query: 1   MSLMSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSE 60
           MS MSEMS M EM EM  M  MS MS +S MSEM +M EM+EMSE   +S +SE+  MSE
Sbjct: 58  MSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMFEMSEMSEMSEMSEMSEMSEMSEMSE 117

Query: 61  MSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEMPLMS 119
           MSEM  M   S+MSE+S+MFEM EM+EMS MS MSE+  MSEMSEM +MSEMSEM  MS
Sbjct: 118 MSEMSEMSEMSEMSEMSVMFEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMS 176

BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6603337.1 (hypothetical protein SDJN03_03946, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100 bits (248), Expect = 3.29e-23
Identity = 75/122 (61.48%), Postives = 92/122 (75.41%), Query Frame = 0

Query: 4   MSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKM---YEMTEMSEKPLLSVISELLLMSE 63
           MSEMS M EM EM  M  MS MSVIS MSEMS+M   +EM+EMSE  ++S +SE+ +MSE
Sbjct: 40  MSEMSEMSEMSEMSEMSEMSEMSVISKMSEMSEMSFMFEMSEMSEMSVMSEMSEMSVMSE 99

Query: 64  MSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMS---EMSEMPL 119
           MSEM  M   S+MSE+S+M +M EM+EMSVMS MSE+ +MSEMSEM +MS   EM EMP+
Sbjct: 100 MSEMSEMSVMSEMSEMSVMSKMSEMSEMSVMSEMSEMSVMSEMSEMSEMSVMSEMFEMPV 159

BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6603397.1 (hypothetical protein SDJN03_04006, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 3.68e-23
Identity = 75/119 (63.03%), Postives = 86/119 (72.27%), Query Frame = 0

Query: 1   MSLMSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSE 60
           MS MSEMS M EM EM  M  MS MS +S MSEMS+M EM+EMSE   +S +SE+  MSE
Sbjct: 1   MSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSE 60

Query: 61  MSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEMPLMS 119
           MSEM  M   S+MSE+S M EM EM+EMS MS MSE+  MSEMSEM +MS MSEMP MS
Sbjct: 61  MSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSVMSEMPEMS 119

BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6592798.1 (hypothetical protein SDJN03_12274, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.4 bits (246), Expect = 9.14e-22
Identity = 76/119 (63.87%), Postives = 87/119 (73.11%), Query Frame = 0

Query: 1   MSLMSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSE 60
           MS MSEMS M EM EM +M  MS MS +S MSEMS+M EM+EMSE   +S +SE+  MSE
Sbjct: 103 MSEMSEMSEMSEMSEMSVMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSE 162

Query: 61  MSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEMPLMS 119
           MSEM  M   S+MSE+S M EM EM+EMS MS MSEL  MSEMSEM +MSEMSEM  MS
Sbjct: 163 MSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSEMSELSEMSEMSEMSEMSEMSEMSEMS 221

BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A6J1EW04 (uncharacterized protein LOC111438534 OS=Cucurbita moschata OX=3662 GN=LOC111438534 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 3.79e-25
Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 0

Query: 40  MTEMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELSIMFEMYEMTEMSV-----MSVM 99
           M EMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELS MFE+YEMTEMS      M +M
Sbjct: 1   MIEMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELSTMFEIYEMTEMSEKPLMSMPLM 60

Query: 100 SELLLMSEMSEMYKMSEMSEMPLMS 119
           SEL LMSEM EM+++SEM+ M +MS
Sbjct: 61  SELFLMSEMPEMHEISEMTLMCMMS 85

BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A0L0DKA1 (Zinc finger protein OS=Thecamonas trahens ATCC 50062 OX=461836 GN=AMSG_08485 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.13e-08
Identity = 51/115 (44.35%), Postives = 65/115 (56.52%), Query Frame = 0

Query: 1   MSLMSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSE 60
           M +M  M LM EM EM +M MM  M ++  M EM +M EM EM E   +  + E++ M E
Sbjct: 26  MEMMEMMELMMEMMEMMMMEMMEMMEMMEMM-EMMEMMEMMEMMEMMEMMELMEMMEMME 85

Query: 61  MSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEM 115
           M EM  M    +M E+  M EM EM EM  M  M E++ M EM EM +M EM EM
Sbjct: 86  MMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEM 139

BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A2C9JM98 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106059863 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.97e-08
Identity = 62/125 (49.60%), Postives = 75/125 (60.00%), Query Frame = 0

Query: 1   MSLMSEMSLMHE---MFEMPLMC---MMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISE 60
           MSLMS MSLM     M  MPLM    +MS MS++S MS MS M  M+ MS K  +S++S 
Sbjct: 16  MSLMSHMSLMSHKSLMSHMPLMSHMPLMSHMSLMSHMSLMSHMSLMSVMSLKSHMSLMSH 75

Query: 61  LLLMSEMSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSE 119
           + LMS MS M  M  +S M  +S M  M  M+ MS MS+MS + LMS M  M  MS MS 
Sbjct: 76  MQLMSHMSLMSHMSLKSHMQLMSHMHLMSHMSLMSHMSLMSHMSLMSHMQLMSHMSLMSH 135

BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A0L0DMA6 (Uncharacterized protein OS=Thecamonas trahens ATCC 50062 OX=461836 GN=AMSG_08093 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.16e-05
Identity = 49/115 (42.61%), Postives = 62/115 (53.91%), Query Frame = 0

Query: 1   MSLMSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSE 60
           M LM EM  M EM EM  + M     ++  M EM +M EM EM E   +  + E++ M E
Sbjct: 17  MELMMEMMEMMEMMEMMELMMEMMEMMMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMME 76

Query: 61  MSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEM 115
           M EM  M    +M E+  M EM EM EM  M  M E++ M EM EM +M EM EM
Sbjct: 77  MMEM--MMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEMMEM 129

BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A3G5A0U5 (Divergent protein kinase OS=Harvfovirus sp. OX=2487768 GN=Harvfovirus7_14 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.31e-05
Identity = 41/107 (38.32%), Postives = 69/107 (64.49%), Query Frame = 0

Query: 10  MHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSEMSEMPLMFG 69
           M +M +MP M  MS+MS +  M  MS+M +M +M + P +S ++++  MS+MS+MP M  
Sbjct: 679 MSQMSQMPQMPPMSQMSQVPQMPPMSQMSQMPQMPQMPDMSQMTQMPQMSQMSQMPQM-- 738

Query: 70  RSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEMP 116
             +MS++  M +M +MT+M  M  M++   MS+M +M +M +M +MP
Sbjct: 739 -PQMSQMPQMTQMPQMTQMPQMPQMTQ---MSQMPQMTQMPQMPQMP 779

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022932212.17.82e-2576.47uncharacterized protein LOC111438534 [Cucurbita moschata][more]
KAG6603345.11.77e-2363.03hypothetical protein SDJN03_03954, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6603337.13.29e-2361.48hypothetical protein SDJN03_03946, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6603397.13.68e-2363.03hypothetical protein SDJN03_04006, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6592798.19.14e-2263.87hypothetical protein SDJN03_12274, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1EW043.79e-2576.47uncharacterized protein LOC111438534 OS=Cucurbita moschata OX=3662 GN=LOC1114385... [more]
A0A0L0DKA16.13e-0844.35Zinc finger protein OS=Thecamonas trahens ATCC 50062 OX=461836 GN=AMSG_08485 PE=... [more]
A0A2C9JM986.97e-0849.60Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106059863 PE=4 SV=1[more]
A0A0L0DMA62.16e-0542.61Uncharacterized protein OS=Thecamonas trahens ATCC 50062 OX=461836 GN=AMSG_08093... [more]
A0A3G5A0U54.31e-0538.32Divergent protein kinase OS=Harvfovirus sp. OX=2487768 GN=Harvfovirus7_14 PE=4 S... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g287080.m01Csor.00g287080.m01mRNA