Csor.00g287080 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGATGTCTGAGATGTCTCTGATGCATGAGATGTTTGAGATGCCTTTGATGTGTATGATGTCTCGGATGTCTGTGATATCTGCAATGTCTGAGATGTCTAAGATGTATGAGATGACTGAGATGTCTGAGAAGCCTCTGCTGTCTGTGATATCTGAGTTGCTTCTGATGTCTGAGATGTCTGAGATGCCTCTGATGTTTGGGAGGTCTAAGATGTCTGAACTGTCTATAATGTTTGAGATGTATGAGATGACTGAGATGTCTGTGATGTCTGTGATGTCTGAGTTGCTTCTAATGTCTGAGATGTCTGAGATGTATAAGATGTCTGAGATGTCTGAGATGCCTCTAATGTCTTAG ATGTCTTTGATGTCTGAGATGTCTCTGATGCATGAGATGTTTGAGATGCCTTTGATGTGTATGATGTCTCGGATGTCTGTGATATCTGCAATGTCTGAGATGTCTAAGATGTATGAGATGACTGAGATGTCTGAGAAGCCTCTGCTGTCTGTGATATCTGAGTTGCTTCTGATGTCTGAGATGTCTGAGATGCCTCTGATGTTTGGGAGGTCTAAGATGTCTGAACTGTCTATAATGTTTGAGATGTATGAGATGACTGAGATGTCTGTGATGTCTGTGATGTCTGAGTTGCTTCTAATGTCTGAGATGTCTGAGATGTATAAGATGTCTGAGATGTCTGAGATGCCTCTAATGTCTTAG ATGTCTTTGATGTCTGAGATGTCTCTGATGCATGAGATGTTTGAGATGCCTTTGATGTGTATGATGTCTCGGATGTCTGTGATATCTGCAATGTCTGAGATGTCTAAGATGTATGAGATGACTGAGATGTCTGAGAAGCCTCTGCTGTCTGTGATATCTGAGTTGCTTCTGATGTCTGAGATGTCTGAGATGCCTCTGATGTTTGGGAGGTCTAAGATGTCTGAACTGTCTATAATGTTTGAGATGTATGAGATGACTGAGATGTCTGTGATGTCTGTGATGTCTGAGTTGCTTCTAATGTCTGAGATGTCTGAGATGTATAAGATGTCTGAGATGTCTGAGATGCCTCTAATGTCTTAG MSLMSEMSLMHEMFEMPLMCMMSRMSVISAMSEMSKMYEMTEMSEKPLLSVISELLLMSEMSEMPLMFGRSKMSELSIMFEMYEMTEMSVMSVMSELLLMSEMSEMYKMSEMSEMPLMS Homology
BLAST of Csor.00g287080 vs. NCBI nr
Match: XP_022932212.1 (uncharacterized protein LOC111438534 [Cucurbita moschata]) HSP 1 Score: 102 bits (255), Expect = 7.82e-25 Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 0
BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6603345.1 (hypothetical protein SDJN03_03954, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100 bits (248), Expect = 1.77e-23 Identity = 75/119 (63.03%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6603337.1 (hypothetical protein SDJN03_03946, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100 bits (248), Expect = 3.29e-23 Identity = 75/122 (61.48%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6603397.1 (hypothetical protein SDJN03_04006, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.4 bits (241), Expect = 3.68e-23 Identity = 75/119 (63.03%), Postives = 86/119 (72.27%), Query Frame = 0
BLAST of Csor.00g287080 vs. NCBI nr
Match: KAG6592798.1 (hypothetical protein SDJN03_12274, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.4 bits (246), Expect = 9.14e-22 Identity = 76/119 (63.87%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A6J1EW04 (uncharacterized protein LOC111438534 OS=Cucurbita moschata OX=3662 GN=LOC111438534 PE=4 SV=1) HSP 1 Score: 102 bits (255), Expect = 3.79e-25 Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 0
BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A0L0DKA1 (Zinc finger protein OS=Thecamonas trahens ATCC 50062 OX=461836 GN=AMSG_08485 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.13e-08 Identity = 51/115 (44.35%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A2C9JM98 (Uncharacterized protein OS=Biomphalaria glabrata OX=6526 GN=106059863 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.97e-08 Identity = 62/125 (49.60%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A0L0DMA6 (Uncharacterized protein OS=Thecamonas trahens ATCC 50062 OX=461836 GN=AMSG_08093 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.16e-05 Identity = 49/115 (42.61%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Csor.00g287080 vs. ExPASy TrEMBL
Match: A0A3G5A0U5 (Divergent protein kinase OS=Harvfovirus sp. OX=2487768 GN=Harvfovirus7_14 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.31e-05 Identity = 41/107 (38.32%), Postives = 69/107 (64.49%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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