Csor.00g284300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTCGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGTTTGTTTCTTCTTTATTCTCCCTCTCCTTGTTTTTCTGCTGCTTTTGCTGATTCCTTTTGGGTTTCAATGACTTTGCAGGCCGATGCTGCAACCAATAATGACGGACTTTTTGATGCGGACGAGAAGAAACCCGATTTATTGGATCAATTTGAGTATGACCCTTTCTTATTCTTCCTGTCTGTGTTTGATTTGAAGTTTTCCTTTGCTTTTGAAGTCGAAATCGGTACTGTTTCAATGTCTCAACAGTTTCAACTGCAGTTCCTTTCACTTCGCGATCTTTTGGATGGTTTTCCCTCCGATTTGTTTGAATATTTTCTTGGCGAAATTTATGAATAACGCACGTTTCTGTTCTCTTGTTGTCTCTGCGAATCGAAATTGAACATGAAGTTTTAGGTTGCCATAAGTTGCACATGTTCTCTGTAATCTGCCTTCAGAAAACTTTCCGATCCATTTTATGAAAAAAGAGATGTATTAGAAGGGAAAAAGAAAACCCTAGTTCGTTGCTTGCATCATCTCTAGATTTAGTCAGAACTTTTGTTCATCAATGAAAGATAAAATTGGGAAGACTCAGTTTTCCTCGAGCATAAGTATATAAAACTACTACAAATCGAACCTTAGATATTCAAGTTTGTGAGAGAGACATCATTGTCATATTAGTTCTGATTGGGAATTTCCTTTGTTCATCCATGAAATGTGAAGGTTTGAACTCATAACAGTCATCTTGCTCTCTAGTTTATTAATACTCTGACTGAACTGAAATCATGGCAATTATCTTTCTAAACCTCCGAAGTTAAGTTATGAACAAGAACAACATCTGGAAGTTGTTTAATCTTGTTTTCTTCTTCTTTTTGTCAGTTCTCGCCTTCATGAAAACTTAGTTACTTCTCCTCTGCTGCATGATTGAATTTACTATTTTGATCTTTGTTAGCTCTCATACAGTGACTGCCTATTATATTACTGTCTGTTATATTACCGTCTGTTATTGATTTTTGTGAGATCCCACATTGGTCGGAGAGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTTCCTACTAGACGCATTTTAAAACCTTGAGGGGAAGCCCAGAAGGGAAAGTCCGAAGAGGGCATTATTGCTAGCGAGGGTTTGGGCTGTTACAAATGGTATCAGAGCCAGAGGACGCCAGCCCCCAAGGAAGGTGTATTGTGAGATCCTACGTCGGTTGGAGAGGAGAACGAAACATTTCTTATAAGAGTGTAGAAACCTCTCCCTAGAAGGACAATATTTGCTAACGGTGGCTTGGACTGTTACAATTTTAGAGTTCTTGCTTGATTTAGTGAAATATGAGGAGACAGTTGAGTGGTGCATGTTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGATAACCGGAGGCATTGGGGACAACTCATGGCCTCCACTCTCGGGAGACTTGGCCTACCTGGGCTTCGCCTGCAGAGACAACTATCTGTGTATTAGCTTGTTTAAGGGCTACACTGAATATTGAACGCATGCCAATATGCAATAGTCTCCTTTGGACCCTTTGATTACAATATCTAAATTAACAAGAAGTTGTTCTTGATTACGATAGTGGCTCAGTGTGGTGCTATGTTCTTTATTGTTTCCAGAGATTTTGATAATTTCAACTCCATTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGTAGGTATAATTGGTATATCTCTTTATTATATTTATTGATGCCCCCATTATTCCTGCATATGGAAACATCCACCATTTTTGCAGGAAACATCTATGAAGAGAACACAACCATTGATGACGAGATTATAAAGTCGAGCAGGTATAATCGAGAATCAGCTATTCATTTATCCTCGTTCTTGTAATTGTGATGATCATGAGGTGAAGTCTGTATGAATCTGTGTTACAGGTGGCCTTGTACGCGCTCATTTGCAGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCATGGAAATCCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGA ATGCCGTCGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGCCGATGCTGCAACCAATAATGACGGACTTTTTGATGCGGACGAGAAGAAACCCGATTTATTGGATCAATTTGAAGATTTTGATAATTTCAACTCCATTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGAAACATCTATGAAGAGAACACAACCATTGATGACGAGATTATAAAGTCGAGCAGGTGGCCTTGTACGCGCTCATTTGCAGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCATGGAAATCCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGA ATGCCGTCGTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCGTCTCATTCGCAGAATTCTGCTACCCAACCTTCCCCGCGCAAACACTTGGCCGATGCTGCAACCAATAATGACGGACTTTTTGATGCGGACGAGAAGAAACCCGATTTATTGGATCAATTTGAAGATTTTGATAATTTCAACTCCATTGAGAAGTACAAGAAGTATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTTTCAAAGAAAAACCTCTATGGAGGAAACATCTATGAAGAGAACACAACCATTGATGACGAGATTATAAAGTCGAGCAGGTGGCCTTGTACGCGCTCATTTGCAGACCCTTTGCAGGGTTTTGAAGATCACAGAAGCAGCTGTTCAACATCCACCATGGAAATCCACGGTACCATCTCAAATGGGAAGAATGCTGTGAAGAAGAGTGGATGA MPSSASAPASPPSASHSQNSATQPSPRKHLADAATNNDGLFDADEKKPDLLDQFEDFDNFNSIEKYKKYEADYAQRLMAKYFSKKNLYGGNIYEENTTIDDEIIKSSRWPCTRSFADPLQGFEDHRSSCSTSTMEIHGTISNGKNAVKKSG Homology
BLAST of Csor.00g284300 vs. NCBI nr
Match: KAG6589581.1 (hypothetical protein SDJN03_15004, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 298 bits (762), Expect = 1.14e-101 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Csor.00g284300 vs. NCBI nr
Match: KAG7023270.1 (hypothetical protein SDJN02_14295 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 274 bits (701), Expect = 1.27e-91 Identity = 151/201 (75.12%), Postives = 151/201 (75.12%), Query Frame = 0
BLAST of Csor.00g284300 vs. NCBI nr
Match: KGN63759.1 (hypothetical protein Csa_014356 [Cucumis sativus]) HSP 1 Score: 259 bits (662), Expect = 2.03e-86 Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of Csor.00g284300 vs. NCBI nr
Match: XP_022134661.1 (uncharacterized protein LOC111006878 [Momordica charantia]) HSP 1 Score: 253 bits (645), Expect = 8.19e-84 Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of Csor.00g284300 vs. NCBI nr
Match: XP_008453324.1 (PREDICTED: uncharacterized protein LOC103494077 [Cucumis melo] >KAA0058023.1 uncharacterized protein E6C27_scaffold274G003280 [Cucumis melo var. makuwa] >TYJ98246.1 uncharacterized protein E5676_scaffold346G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 247 bits (631), Expect = 9.42e-82 Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Csor.00g284300 vs. ExPASy TrEMBL
Match: A0A0A0LRW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015050 PE=4 SV=1) HSP 1 Score: 259 bits (662), Expect = 9.82e-87 Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of Csor.00g284300 vs. ExPASy TrEMBL
Match: A0A6J1BYF6 (uncharacterized protein LOC111006878 OS=Momordica charantia OX=3673 GN=LOC111006878 PE=4 SV=1) HSP 1 Score: 253 bits (645), Expect = 3.96e-84 Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of Csor.00g284300 vs. ExPASy TrEMBL
Match: A0A5D3BGU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00180 PE=4 SV=1) HSP 1 Score: 247 bits (631), Expect = 4.56e-82 Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Csor.00g284300 vs. ExPASy TrEMBL
Match: A0A1S3BVY9 (uncharacterized protein LOC103494077 OS=Cucumis melo OX=3656 GN=LOC103494077 PE=4 SV=1) HSP 1 Score: 247 bits (631), Expect = 4.56e-82 Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 0
BLAST of Csor.00g284300 vs. ExPASy TrEMBL
Match: A0A2I4G2J5 (uncharacterized protein LOC109004116 OS=Juglans regia OX=51240 GN=LOC109004116 PE=4 SV=1) HSP 1 Score: 176 bits (447), Expect = 6.56e-54 Identity = 95/154 (61.69%), Postives = 118/154 (76.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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