Csor.00g281300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCACCACGCCGGAAAACGCAGACTCGACGTCCTTGCCGCTCATCTTGCTCCTGCTGGTGATATTTCCACCGGACAAGGCCATGTTCTCCCTGCGGTACTCTTCTGTTCGTCTTTTTTTCCCCGGGGAACCTTTGTCTTTTTGTGGATTTAGATTGTAGATCCTGTAGTGTTGTTATTGTAATTGCCGATGAGCCTTTGATTGATGTTTTTGGATACTTGTTTTTGTCTGAAATGAGATGTGTTTTGTGTTTGATTCTTTGGGGGTGGTTAGAATTGCTGTAGCTACGGCAGTTCTGTGATTCGAAGATTCGATAATAAGACGTACTTCGCAAGACAAGGATCTGAGGCTTGTGGTGCTTATATGAGGCAGGCTTCGGCTACAGAGGTGATTGATCGAAGAAACTAAACTCACTGTAGTAGTGATTTAACACTTCACGTTTCTTTTAGAACATTTTGATTCCTCTTTCTGGATACCTGATTTTGTTCTCTTCCTCTGACTTTCTTAAAGATGATATTTCAGGTTCAGGGTAATCAACGATCTAATTCTCAGCCGTTCTTGGATGTCTCCGAAGGTCCAGTGTATTCAAGACCTGCAAAGGATGGAGGGATTCCCAGTATTGGAATAGAACAGCTTATGACTCAGAATTTCAATTTGATTGCATCTGAACCTCCATTGTTTGCCAGAGCATGTTTGGGAATCAATGAACAAAATAACCAGGTCATTTCGGAGACAAAACCGCCATCCTCTGGATCAAAAGGTTGGTTGTTGATTTTCCAATTAGAAATTGATGAATTAGTGTCACAAGATATAGCTTAATGCGCCTCAGGCCTTTGGCCACATGTTGCTGATGTAGAGATTTTACTTGCTCCATTTGTTATATTCACTTTCATTTCTCTTATTCTAACACAGGAATTGGCGGTTTGTCTCCGAGGATGGATGTGGCAGAATCAGGCCGAGGTTATGTTTTGACCGTAGAAATTCCAGGAGTAAAGATCAATGACATTAGAGTCGAGGTCGATGACCAAAAGTGAGACAATGGTTTTATAATGATGTTCATTTCATGCATTTTCTACATTTCTCTTCACAGTGAACTTGGATTTAAATATTGAAGACAAAGATGATGGTGGTGAAACCTGAGCTTAATGATTATTCAGGACCTCCTATTGATTACCAAGTTGAATTGTTAAGTTGGTACAGGCTGCTGGTTAGACCCAAAAGCTTTTAAGCTATTAGATCATGATAAGTACAGTCTTTCCAATATGTTTTCGATGATCTTCCTCACAAGTAATGTGAGACTTCACATTGGTTGGAGAAGAGAAACAAAACATTCCTTATAAGGGTGTGGAAATCTCTTTCTAATAGATGTGTTTTAAAACCTTGAGGGGAAGCCCTTGAAGGGAATGTCCAAAGAGGACAATATCCGTTAGCGGTGGGCTTGGACGGTTACAAATGGTATCAGTGCTAAACACCAGGAAGTGTGCCAGCGAGGACGTTGGGCCCCAAGGGGGTGGATTGTGAGATCCCACATCGGATGAAGAGGGGAACAAAACATTCTTTATAAGGGTGCAGAAACTTCTCTCTAGTAGATGCGTTTTGAAACCTTGAAGGGAAGTCCTCGAAGGGAATGCCTAAAGAGGACAATATTTGCTGGTGGTGGACTTGGACTTGGACGGTTACATGTAAGCTTGAATATTAATAAGAGACCAATGGCTGAACTATGAGATACTAATATATGAATGGAAATGGGGTGGATTTGGTCAGAATGGCCTTTATCATCTTCAACCTTTACTTTTAGAAGGATCCATATTCTTGATGAAGTTAAGTGGGTAGGGAATGTCATCCTAACAAACAAGAGATGTGTTCAACGCATGGTTTTCTGTACGATATCACATTAAATTTATACCAAATCCAAAAACTTAAATAAGCTTGAATATTTGTATGTAATGGTATTGATCTGACAGTGGAAAGCTGTTCTCTGGCAGGTTGACCATAATCGGCAAACGCTCAAATCAACACTGTGAAGTGGTAGGATATTCAAGCGACTCGATCTCTTCATATCACAAGAGAGAGATATCACAAGGGCCTTACCAGGTTGTGTGGCCACTTCCAATCAACATTAATAAGGACGGAGTATTAGCTGAGTTCTGGTAAGTAGCAAGATGTCAGTCCTCCGTTCCATTGCATCTGAATATCTTTCAACTTCATGAGGCTAATTCTGCACATGCCCTCACAACGCATGTTCTTTCTATTTTTTCTTACCCTTTGCTCATGGTTTTGTATGTCAAATAGCCAAACTGCTCCTTTTCGAACCCCGTTTTTTGTAGCTCGCTCGTTTGTTAATGACTCGGTGTTTTTGTCTTCTTTTTTTGTGGATGCAGGGATGGATTACTACGGATCACTCTACCGAAACTCTGA ATGGAGCACCACGCCGGAAAACGCAGACTCGACGTCCTTGCCGCTCATCTTGCTCCTGCTGGTGATATTTCCACCGGACAAGGCCATGTTCTCCCTGCGAATTGCTGTAGCTACGGCAGTTCTGTGATTCGAAGATTCGATAATAAGACGTACTTCGCAAGACAAGGATCTGAGGCTTGTGGTGCTTATATGAGGCAGGCTTCGGCTACAGAGGTTCAGGGTAATCAACGATCTAATTCTCAGCCGTTCTTGGATGTCTCCGAAGGTCCAGTGTATTCAAGACCTGCAAAGGATGGAGGGATTCCCAGTATTGGAATAGAACAGCTTATGACTCAGAATTTCAATTTGATTGCATCTGAACCTCCATTGTTTGCCAGAGCATGTTTGGGAATCAATGAACAAAATAACCAGGTCATTTCGGAGACAAAACCGCCATCCTCTGGATCAAAAGGAATTGGCGGTTTGTCTCCGAGGATGGATGTGGCAGAATCAGGCCGAGGTTATGTTTTGACCGTAGAAATTCCAGGAGTAAAGATCAATGACATTAGAGTCGAGGTCGATGACCAAAATGGAAAGCTGTTCTCTGGCAGGTTGACCATAATCGGCAAACGCTCAAATCAACACTGTGAAGTGGTAGGATATTCAAGCGACTCGATCTCTTCATATCACAAGAGAGAGATATCACAAGGGCCTTACCAGGTTGTGTGGCCACTTCCAATCAACATTAATAAGGACGGAGTATTAGCTGAGTTCTGGGATGGATTACTACGGATCACTCTACCGAAACTCTGA ATGGAGCACCACGCCGGAAAACGCAGACTCGACGTCCTTGCCGCTCATCTTGCTCCTGCTGGTGATATTTCCACCGGACAAGGCCATGTTCTCCCTGCGAATTGCTGTAGCTACGGCAGTTCTGTGATTCGAAGATTCGATAATAAGACGTACTTCGCAAGACAAGGATCTGAGGCTTGTGGTGCTTATATGAGGCAGGCTTCGGCTACAGAGGTTCAGGGTAATCAACGATCTAATTCTCAGCCGTTCTTGGATGTCTCCGAAGGTCCAGTGTATTCAAGACCTGCAAAGGATGGAGGGATTCCCAGTATTGGAATAGAACAGCTTATGACTCAGAATTTCAATTTGATTGCATCTGAACCTCCATTGTTTGCCAGAGCATGTTTGGGAATCAATGAACAAAATAACCAGGTCATTTCGGAGACAAAACCGCCATCCTCTGGATCAAAAGGAATTGGCGGTTTGTCTCCGAGGATGGATGTGGCAGAATCAGGCCGAGGTTATGTTTTGACCGTAGAAATTCCAGGAGTAAAGATCAATGACATTAGAGTCGAGGTCGATGACCAAAATGGAAAGCTGTTCTCTGGCAGGTTGACCATAATCGGCAAACGCTCAAATCAACACTGTGAAGTGGTAGGATATTCAAGCGACTCGATCTCTTCATATCACAAGAGAGAGATATCACAAGGGCCTTACCAGGTTGTGTGGCCACTTCCAATCAACATTAATAAGGACGGAGTATTAGCTGAGTTCTGGGATGGATTACTACGGATCACTCTACCGAAACTCTGA MEHHAGKRRLDVLAAHLAPAGDISTGQGHVLPANCCSYGSSVIRRFDNKTYFARQGSEACGAYMRQASATEVQGNQRSNSQPFLDVSEGPVYSRPAKDGGIPSIGIEQLMTQNFNLIASEPPLFARACLGINEQNNQVISETKPPSSGSKGIGGLSPRMDVAESGRGYVLTVEIPGVKINDIRVEVDDQNGKLFSGRLTIIGKRSNQHCEVVGYSSDSISSYHKREISQGPYQVVWPLPININKDGVLAEFWDGLLRITLPKL Homology
BLAST of Csor.00g281300 vs. ExPASy Swiss-Prot
Match: Q4UKR8 (Small heat shock protein C2 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=hspC2 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-11 Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy Swiss-Prot
Match: Q4UJB1 (Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=hspc4-1 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.0e-08 Identity = 41/127 (32.28%), Postives = 64/127 (50.39%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy Swiss-Prot
Match: Q9XIE3 (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07 Identity = 35/123 (28.46%), Postives = 62/123 (50.41%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy Swiss-Prot
Match: O14368 (Heat shock protein 16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp16 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07 Identity = 39/111 (35.14%), Postives = 57/111 (51.35%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy Swiss-Prot
Match: P19244 (22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.9e-07 Identity = 32/106 (30.19%), Postives = 55/106 (51.89%), Query Frame = 0
BLAST of Csor.00g281300 vs. NCBI nr
Match: KAG6572427.1 (hypothetical protein SDJN03_29155, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 536 bits (1382), Expect = 1.75e-192 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of Csor.00g281300 vs. NCBI nr
Match: KAG7012027.1 (hspC2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 510 bits (1314), Expect = 3.16e-182 Identity = 254/263 (96.58%), Postives = 255/263 (96.96%), Query Frame = 0
BLAST of Csor.00g281300 vs. NCBI nr
Match: XP_022953065.1 (uncharacterized protein LOC111455581 isoform X2 [Cucurbita moschata]) HSP 1 Score: 504 bits (1299), Expect = 6.11e-180 Identity = 250/263 (95.06%), Postives = 253/263 (96.20%), Query Frame = 0
BLAST of Csor.00g281300 vs. NCBI nr
Match: XP_023553628.1 (uncharacterized protein LOC111811120 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 499 bits (1286), Expect = 5.86e-178 Identity = 247/263 (93.92%), Postives = 252/263 (95.82%), Query Frame = 0
BLAST of Csor.00g281300 vs. NCBI nr
Match: XP_022953064.1 (uncharacterized protein LOC111455581 isoform X1 [Cucurbita moschata]) HSP 1 Score: 499 bits (1284), Expect = 1.37e-177 Identity = 250/267 (93.63%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy TrEMBL
Match: A0A6J1GNM5 (uncharacterized protein LOC111455581 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455581 PE=3 SV=1) HSP 1 Score: 504 bits (1299), Expect = 2.96e-180 Identity = 250/263 (95.06%), Postives = 253/263 (96.20%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy TrEMBL
Match: A0A6J1GNK5 (uncharacterized protein LOC111455581 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455581 PE=3 SV=1) HSP 1 Score: 499 bits (1284), Expect = 6.63e-178 Identity = 250/267 (93.63%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy TrEMBL
Match: A0A6J1HW22 (uncharacterized protein LOC111468373 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468373 PE=3 SV=1) HSP 1 Score: 498 bits (1282), Expect = 1.16e-177 Identity = 248/263 (94.30%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy TrEMBL
Match: A0A6J1HXH1 (uncharacterized protein LOC111468373 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468373 PE=3 SV=1) HSP 1 Score: 492 bits (1267), Expect = 2.59e-175 Identity = 248/267 (92.88%), Postives = 251/267 (94.01%), Query Frame = 0
BLAST of Csor.00g281300 vs. ExPASy TrEMBL
Match: H6TB35 (HSP27.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 457 bits (1177), Expect = 1.08e-161 Identity = 230/263 (87.45%), Postives = 236/263 (89.73%), Query Frame = 0
BLAST of Csor.00g281300 vs. TAIR 10
Match: AT1G06460.1 (alpha-crystallin domain 32.1 ) HSP 1 Score: 147.1 bits (370), Expect = 1.9e-35 Identity = 104/296 (35.14%), Postives = 139/296 (46.96%), Query Frame = 0
BLAST of Csor.00g281300 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-08 Identity = 35/123 (28.46%), Postives = 62/123 (50.41%), Query Frame = 0
BLAST of Csor.00g281300 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.7e-07 Identity = 34/124 (27.42%), Postives = 62/124 (50.00%), Query Frame = 0
BLAST of Csor.00g281300 vs. TAIR 10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.7e-07 Identity = 34/110 (30.91%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of Csor.00g281300 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A ) HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07 Identity = 31/104 (29.81%), Postives = 55/104 (52.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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