Csor.00g272990 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g272990
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor bHLH146-like
Location	Csor_Chr12: 12895011 .. 12895541 (-)
RNA-Seq Expression	Csor.00g272990
Synteny	Csor.00g272990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCAAATTTTGAGAAAAAGAAAAAGGGTTCTTTCCCTTGAACCAAACAAACTTGCTTACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTACCCAAAATCTCTCATCATCATCAACAACATCAAGAACAAAGTTTTCAGAAGCTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAACTGAGTTTTCATGGGGCAATGCTCTTAAAAAGAAGCTTCTTCAAAGAGAAGATGGCAATGGGAGTAATGGGTTTGGTCTCTCTCTCCAAAGGGTGAAATTTGCTCGAGAAAATTTAGAGAGAGAAGACGAAGAACACGAAGAACGCGAAGAACACGAAGAACGAAAGATAGAAAATGGGCTGATGAAGCTGAGAAAAATCGTCCCGGGTGGTTCAAATGGAGAATTGGAAGAAGATGATTTGTTCAAACAAACTGAGAGTTATATAAAATGTCTTGAGTTGCAGGTCAATGTTCTTAGATGTTTGGTTGATACAAACACAAATTAA

mRNA sequence

ATGGGAAGGCAAATTTTGAGAAAAAGAAAAAGGGTTCTTTCCCTTGAACCAAACAAACTTGCTTACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTACCCAAAATCTCTCATCATCATCAACAACATCAAGAACAAAGTTTTCAGAAGCTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAACTGAGTTTTCATGGGGCAATGCTCTTAAAAAGAAGCTTCTTCAAAGAGAAGATGGCAATGGGAGTAATGGGTTTGGTCTCTCTCTCCAAAGGGTGAAATTTGCTCGAGAAAATTTAGAGAGAGAAGACGAAGAACACGAAGAACGCGAAGAACACGAAGAACGAAAGATAGAAAATGGGCTGATGAAGCTGAGAAAAATCGTCCCGGGTGGTTCAAATGGAGAATTGGAAGAAGATGATTTGTTCAAACAAACTGAGAGTTATATAAAATGTCTTGAGTTGCAGGTCAATGTTCTTAGATGTTTGGTTGATACAAACACAAATTAA

Coding sequence (CDS)

ATGGGAAGGCAAATTTTGAGAAAAAGAAAAAGGGTTCTTTCCCTTGAACCAAACAAACTTGCTTACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTACCCAAAATCTCTCATCATCATCAACAACATCAAGAACAAAGTTTTCAGAAGCTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAACTGAGTTTTCATGGGGCAATGCTCTTAAAAAGAAGCTTCTTCAAAGAGAAGATGGCAATGGGAGTAATGGGTTTGGTCTCTCTCTCCAAAGGGTGAAATTTGCTCGAGAAAATTTAGAGAGAGAAGACGAAGAACACGAAGAACGCGAAGAACACGAAGAACGAAAGATAGAAAATGGGCTGATGAAGCTGAGAAAAATCGTCCCGGGTGGTTCAAATGGAGAATTGGAAGAAGATGATTTGTTCAAACAAACTGAGAGTTATATAAAATGTCTTGAGTTGCAGGTCAATGTTCTTAGATGTTTGGTTGATACAAACACAAATTAA

Protein sequence

MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEHEERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN

Homology

[Close]

BLAST of Csor.00g272990 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 65/175 (37.14%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           M RQI+ ++KRV SLEPNK    +F R Y  +L+ +L K++ +     + S ++ VK EV
Sbjct: 1   MERQIINRKKRVFSLEPNKNPSAVFTRKYTSHLVPALKKLNMN-----KNSSKQTVKHEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMA+A SA EF+W   L +KL      N +     S   ++     LER D+E      +
Sbjct: 61  DMALALSAQEFAWSRFLLQKL--SSSSNPTTTTSSSSDGIRI----LERPDKE----GGN 120

Query: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNT 176
           EE  IE  L +L+K++PGG   E+  +++  +  +YIKCLELQ   L+ +V  +T
Sbjct: 121 EEGGIEERLRELKKLLPGGE--EMNVEEMLSEIGNYIKCLELQTIALKSIVQDST 158

[Close]

BLAST of Csor.00g272990 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 60  VDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREE 119
           V MA A   +   W  A    LL+R D + +       + V+F+R   +   +    R  
Sbjct: 54  VSMARAAGGSSRLWSRA----LLRRADKDDN-------KIVRFSRRKWKISSK--RRRSN 113

Query: 120 HEERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVD 173
                +E    +LR +VPGG  G +E   L ++T  YIKCL +QV V++CLVD
Sbjct: 114 QRAPVVEEAAERLRNLVPGG--GGMETSKLMEETAHYIKCLSMQVKVMQCLVD 151

[Close]

BLAST of Csor.00g272990 vs. NCBI nr
Match: KAG6586090.1 (Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342 bits (876), Expect = 3.13e-118
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH
Sbjct: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120

Query: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176
           EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN
Sbjct: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176

[Close]

BLAST of Csor.00g272990 vs. NCBI nr
Match: XP_022938205.1 (transcription factor bHLH146-like [Cucurbita moschata])

HSP 1 Score: 339 bits (870), Expect = 2.57e-117
Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQ+FQKLVKFEV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKF+RENLEREDEEHEEREEH
Sbjct: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLEREDEEHEEREEH 120

Query: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176
           EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN
Sbjct: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176

[Close]

BLAST of Csor.00g272990 vs. NCBI nr
Match: XP_022969610.1 (transcription factor bHLH146-like [Cucurbita maxima])

HSP 1 Score: 316 bits (810), Expect = 3.87e-108
Identity = 167/179 (93.30%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           MGRQILRKRKRVLSLEP+KLAYTMFARNYVKYLMTSLPKISHHHQQHQ+Q+FQKLVKFEV
Sbjct: 1   MGRQILRKRKRVLSLEPDKLAYTMFARNYVKYLMTSLPKISHHHQQHQQQNFQKLVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMAMAQSATEFSWGNALKKKLLQRED NGSNGFG SL  VKF+RENLEREDEEHEE EEH
Sbjct: 61  DMAMAQSATEFSWGNALKKKLLQREDDNGSNGFGFSLP-VKFSRENLEREDEEHEEHEEH 120

Query: 121 EER---KIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176
           EER   KIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN
Sbjct: 121 EEREERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 178

[Close]

BLAST of Csor.00g272990 vs. NCBI nr
Match: XP_023538247.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316 bits (809), Expect = 4.62e-108
Identity = 165/176 (93.75%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQ+FQKLVKFEV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFG SLQ VKF++ENLERE EEHEER+E 
Sbjct: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQENLEREHEEHEERKEP 120

Query: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176
              KIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN
Sbjct: 121 ---KIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 173

[Close]

BLAST of Csor.00g272990 vs. NCBI nr
Match: KAG7020915.1 (hypothetical protein SDJN02_17603, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233 bits (594), Expect = 5.30e-76
Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 34  MTSLPKISHHHQQHQEQSFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGF 93
           MTSLPKISHHHQQHQEQ+FQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGF
Sbjct: 1   MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGF 60

Query: 94  GLSLQRVKFARENLEREDEEHEEREEHEERKIENGLMKLRKIVPGGSNGELEEDDLFKQT 153
           GLSLQRVKF+RENLER DEEHEEREEHEERKIENGLMKLRKIVPGGSNGELEEDDLFKQT
Sbjct: 61  GLSLQRVKFSRENLERGDEEHEEREEHEERKIENGLMKLRKIVPGGSNGELEEDDLFKQT 120

Query: 154 ES 155
           ES
Sbjct: 121 ES 122

[Close]

BLAST of Csor.00g272990 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 1.24e-117
Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQ+FQKLVKFEV
Sbjct: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKF+RENLEREDEEHEEREEH
Sbjct: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFSRENLEREDEEHEEREEH 120

Query: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176
           EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN
Sbjct: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176

[Close]

BLAST of Csor.00g272990 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1)

HSP 1 Score: 316 bits (810), Expect = 1.88e-108
Identity = 167/179 (93.30%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           MGRQILRKRKRVLSLEP+KLAYTMFARNYVKYLMTSLPKISHHHQQHQ+Q+FQKLVKFEV
Sbjct: 1   MGRQILRKRKRVLSLEPDKLAYTMFARNYVKYLMTSLPKISHHHQQHQQQNFQKLVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMAMAQSATEFSWGNALKKKLLQRED NGSNGFG SL  VKF+RENLEREDEEHEE EEH
Sbjct: 61  DMAMAQSATEFSWGNALKKKLLQREDDNGSNGFGFSLP-VKFSRENLEREDEEHEEHEEH 120

Query: 121 EER---KIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 176
           EER   KIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN
Sbjct: 121 EEREERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN 178

[Close]

BLAST of Csor.00g272990 vs. ExPASy TrEMBL
Match: A0A1S4DZN3 (uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 3.96e-69
Identity = 128/192 (66.67%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           M R+I+RK +RV S+EPNK+AYTMFARNYVK+LMTSL KISH   Q Q+Q+FQKLV+FEV
Sbjct: 1   MVRKIVRKGRRVFSIEPNKVAYTMFARNYVKHLMTSLVKISH---QQQQQNFQKLVRFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQRED-----GNGS-NGFGLSLQRVK-FARENLEREDEE 120
           DMAMAQSA+EFSWG ALKKKLLQR+D     GNGS NGF  SLQ +K  + +NL  E+E+
Sbjct: 61  DMAMAQSASEFSWGIALKKKLLQRDDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEED 120

Query: 121 H----EEREEHEERKIENGLMKLRKIVPGGSNGEL------EEDDLFKQTESYIKCLELQ 175
           H    EE EE EE ++ENGLMKLRKI+PGG +  +      EEDDL KQTESY+KCLELQ
Sbjct: 121 HHEDEEEEEEEEEEEMENGLMKLRKIIPGGDDFSIGGNNLDEEDDLLKQTESYVKCLELQ 180

[Close]

BLAST of Csor.00g272990 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1)

HSP 1 Score: 213 bits (543), Expect = 7.04e-68
Identity = 122/185 (65.95%), Postives = 144/185 (77.84%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           MGRQI+RKR+RV SLEPNKL Y MFARNY K LM SL KIS +HQ     + QK+VKFEV
Sbjct: 1   MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQ-----NLQKVVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQRED---GNGSNGFGLSLQRVKFARENLEREDEEHEER 120
           DMAMA SA+EF+WG+ALK+KLLQ+++   GNG N F  SLQ +KF+RE         EE 
Sbjct: 61  DMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKFSREK--------EEE 120

Query: 121 EEHEERKIENGLMKLRKIVPGG-----SNGEL-EEDDLFKQTESYIKCLELQVNVLRCLV 176
           EE +++K+ENGL+KLRKI+PGG     SNG+L EEDDL KQTESYIKCLELQVNVLRCLV
Sbjct: 121 EEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLV 172

[Close]

BLAST of Csor.00g272990 vs. ExPASy TrEMBL
Match: A0A0A0LJA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 4.37e-67
Identity = 126/186 (67.74%), Postives = 150/186 (80.65%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           M R+++RK +RV S+EP+K+AYTMF RNYVK+LMTSL KISH   Q Q+Q+F+KLVKFEV
Sbjct: 1   MVRKMVRKGRRVFSIEPSKVAYTMFERNYVKHLMTSLVKISH---QQQQQNFRKLVKFEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQRED---GNGS-NGFGLSLQRVK-FARENLEREDEEHE 120
           DMAMAQSA+EFSWG ALKKKLLQR+    GNG+ NGF  S+Q VK  ++ENL  E+E+H 
Sbjct: 61  DMAMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHH 120

Query: 121 -EREEHEERKIENGLMKLRKIVPGGSN----GEL-EEDDLFKQTESYIKCLELQVNVLRC 175
            E EE EE ++ENGLMKLRKI+PGG N    G L EEDDL KQTESY+KCLELQVNVLR 
Sbjct: 121 HEEEEEEEEEMENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESYVKCLELQVNVLRG 180

[Close]

BLAST of Csor.00g272990 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 73/184 (39.67%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQ--EQSFQKLVKF 60
           M RQI+ KRKRV SL+PNK    +FAR YV +L+ +L KI+ +    +  +QS ++ VK 
Sbjct: 1   MERQIINKRKRVFSLQPNKNPKAVFARRYVSHLVPALKKINMNKSSSKTNKQSLEQTVKH 60

Query: 61  EVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLERED-----EE 120
           EVDMA A SA EF+W   L++KLL       S+ +   +       E LER       E+
Sbjct: 61  EVDMAFALSAQEFAWSRFLQQKLL-------SSPYDDPISTSSSPSEILERSSKRQGGEK 120

Query: 121 HEEREEHEE-RKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVD 177
           H++ +E EE  +I+  L +L+K++PGG   E+  +++  +  SYI CLELQ+ VL+ +V 
Sbjct: 121 HQDSDEEEEGGEIKKRLKELQKLLPGGE--EMNMEEILSEIGSYIVCLELQMIVLKSIVQ 175

[Close]

BLAST of Csor.00g272990 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 91.3 bits (225), Expect = 8.5e-19
Identity = 65/175 (37.14%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 1   MGRQILRKRKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQSFQKLVKFEV 60
           M RQI+ ++KRV SLEPNK    +F R Y  +L+ +L K++ +     + S ++ VK EV
Sbjct: 1   MERQIINRKKRVFSLEPNKNPSAVFTRKYTSHLVPALKKLNMN-----KNSSKQTVKHEV 60

Query: 61  DMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREEH 120
           DMA+A SA EF+W   L +KL      N +     S   ++     LER D+E      +
Sbjct: 61  DMALALSAQEFAWSRFLLQKL--SSSSNPTTTTSSSSDGIRI----LERPDKE----GGN 120

Query: 121 EERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNT 176
           EE  IE  L +L+K++PGG   E+  +++  +  +YIKCLELQ   L+ +V  +T
Sbjct: 121 EEGGIEERLRELKKLLPGGE--EMNVEEMLSEIGNYIKCLELQTIALKSIVQDST 158

[Close]

BLAST of Csor.00g272990 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 60  VDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGLSLQRVKFARENLEREDEEHEEREE 119
           V MA A   +   W  A    LL+R D + +       + V+F+R   +   +    R  
Sbjct: 54  VSMARAAGGSSRLWSRA----LLRRADKDDN-------KIVRFSRRKWKISSK--RRRSN 113

Query: 120 HEERKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVD 173
                +E    +LR +VPGG  G +E   L ++T  YIKCL +QV V++CLVD
Sbjct: 114 QRAPVVEEAAERLRNLVPGG--GGMETSKLMEETAHYIKCLSMQVKVMQCLVD 151

The following BLAST results are available for this feature:

BLAST of Csor.00g272990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUM5	1.2e-17	37.14	Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=...	[more]
Q9SKX1	3.4e-04	32.74	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]

BLAST of Csor.00g272990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586090.1	3.13e-118	100.00	Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma...	[more]
XP_022938205.1	2.57e-117	98.86	transcription factor bHLH146-like [Cucurbita moschata]	[more]
XP_022969610.1	3.87e-108	93.30	transcription factor bHLH146-like [Cucurbita maxima]	[more]
XP_023538247.1	4.62e-108	93.75	transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]	[more]
KAG7020915.1	5.30e-76	97.54	hypothetical protein SDJN02_17603, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Csor.00g272990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJ33	1.24e-117	98.86	transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 ...	[more]
A0A6J1I0E6	1.88e-108	93.30	transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE...	[more]
A0A1S4DZN3	3.96e-69	66.67	uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 S...	[more]
A0A6J1DIU0	7.04e-68	65.95	transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4...	[more]
A0A0A0LJA7	4.37e-67	67.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1	[more]

BLAST of Csor.00g272990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18969.1	2.2e-22	39.67	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT4G30180.1	8.5e-19	37.14	sequence-specific DNA binding transcription factors;transcription regulators	[more]
AT2G43060.1	2.4e-05	32.74	ILI1 binding bHLH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 97..124
None	No IPR available	PANTHER	PTHR33124:SF42	TRANSCRIPTION FACTOR BHLH146	coord: 101..174
None	No IPR available	PANTHER	PTHR33124:SF42	TRANSCRIPTION FACTOR BHLH146	coord: 3..102
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 101..174
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 3..102
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 114..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g272990.m01	Csor.00g272990.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity