Csor.00g272870 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g272870
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	60S ribosomal export protein NMD3
Location	Csor_Chr12: 12994990 .. 12996513 (-)
RNA-Seq Expression	Csor.00g272870
Synteny	Csor.00g272870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGAGAAACAGGATTGTTTACAGTTCAACAGACTATTGGCAGTGTTTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATTATGCATTGTCCGGATTGCGAAAGTTACTTGCAGCCACCGCGAACTTGGATCAAGGCACAATTAGAATCAAAGGAACTATTGACATTCTGTATCAAAAGGTTGAAAAATCTGAACAAGGTTAAACTGCTACATGCTGAATTTGTTTGGACAGAACCCCATTCCAAGAGGATCAAGGTGAAGTTGAAAGTTCAGAAAGAAGTCCTTCATGGAGCAATTTTAGAACAGTCCTATGTTGTTGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGCTCAAGGGTCCAGGCCAATCCTGACCAGTGGGTTGCTTCTGTTCAACTCCGGCAGCACGTTCCTCACCGGCGTACCTTTTTCTTCTTGGAGCAACTGATATTAAAGCACAGTGCTGCTGCCAATGCCATAAGGATAAAACAGATGGATCAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGGTGTCAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAATTAGGAGCCGCCAAGATAAACAACTTGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACGTTCTCCGTTGAATTATCTCCAATATGTCGCGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATATTGGCCCTCTTGTAATTTGCACTAAAGTTACAAACTCCGTGGCTTTGCTTGATCCATTAACCTTAAGGCACTGCTTCTTGGATGCGGAGCAGTATTGGAGGACATCCTTTAAGCCTCTACTCACTAGCAGGCAGCTTGTCGAATATATCGTTTTAGATATTGAGAATGTGTCTACTGAAGTCAATGTCAGTGGTTCGAAGTATATTTTGGCCGATGCTCAGATAGCTCGTGTATCAGACTTTGGAAGGAATGACACGATATTCAACATAAGAACCCATCTGGGTCATATTCTAAACCCTGGGGATTATGCCCTTGGTTATGATCTCTATAGAGCCAATAGTAATGATATGGAGCTAGAAAAATATAAGGGCCTTCAACTTCCAGAAGCTATTTTAATCAAGAAGAGTTATGAAGAAAAACGCCAGAGAAAGCGTGGGAAGCCTCGATCGTGGAAGCTAAAATCTCTTGAAATGGAGGTTGATGATAAAGATCAAGGTAGAGCAGAGCAAGATAAGATGCACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATTTGAGGTTCAACATATCGTTGTACCGAAATCGAGAATACCAACCGTCTGAAATGACTGATGGGGAAGATGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGGAGGGGATGGGGACAATGGCATGCACGAGTAA

mRNA sequence

ATGGCTGGAGAAACAGGATTGTTTACAGTTCAACAGACTATTGGCAGTGTTTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATTATGCATTGTCCGGATTGCGAAAGTTACTTGCAGCCACCGCGAACTTGGATCAAGGCACAATTAGAATCAAAGGAACTATTGACATTCTGTATCAAAAGGTTGAAAAATCTGAACAAGGTTAAACTGCTACATGCTGAATTTGTTTGGACAGAACCCCATTCCAAGAGGATCAAGGTGAAGTTGAAAGTTCAGAAAGAAGTCCTTCATGGAGCAATTTTAGAACAGTCCTATGTTGTTGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGCTCAAGGGTCCAGGCCAATCCTGACCAGTGGGTTGCTTCTGTTCAACTCCGGCAGCACGTTCCTCACCGGCGTACCTTTTTCTTCTTGGAGCAACTGATATTAAAGCACAGTGCTGCTGCCAATGCCATAAGGATAAAACAGATGGATCAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGGTGTCAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAATTAGGAGCCGCCAAGATAAACAACTTGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACGTTCTCCGTTGAATTATCTCCAATATGTCGCGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATATTGGCCCTCTTGTAATTTGCACTAAAGTTACAAACTCCGTGGCTTTGCTTGATCCATTAACCTTAAGGCACTGCTTCTTGGATGCGGAGCAGTATTGGAGGACATCCTTTAAGCCTCTACTCACTAGCAGGCAGCTTGTCGAATATATCGTTTTAGATATTGAGAATGTGTCTACTGAAGTCAATGTCAGTGGTTCGAAGTATATTTTGGCCGATGCTCAGATAGCTCGTGTATCAGACTTTGGAAGGAATGACACGATATTCAACATAAGAACCCATCTGGGTCATATTCTAAACCCTGGGGATTATGCCCTTGGTTATGATCTCTATAGAGCCAATAGTAATGATATGGAGCTAGAAAAATATAAGGGCCTTCAACTTCCAGAAGCTATTTTAATCAAGAAGAGTTATGAAGAAAAACGCCAGAGAAAGCGTGGGAAGCCTCGATCGTGGAAGCTAAAATCTCTTGAAATGGAGGTTGATGATAAAGATCAAGGTAGAGCAGAGCAAGATAAGATGCACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATTTGAGGTTCAACATATCGTTGTACCGAAATCGAGAATACCAACCGTCTGAAATGACTGATGGGGAAGATGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGGAGGGGATGGGGACAATGGCATGCACGAGTAA

Coding sequence (CDS)

ATGGCTGGAGAAACAGGATTGTTTACAGTTCAACAGACTATTGGCAGTGTTTTATGTTGCAAATGTGGAATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAGTGTTTGTGTTCCGAAGTTGACATCACAGAAGGTTTACAGAAGCAATTGACTATTATGCATTGTCCGGATTGCGAAAGTTACTTGCAGCCACCGCGAACTTGGATCAAGGCACAATTAGAATCAAAGGAACTATTGACATTCTGTATCAAAAGGTTGAAAAATCTGAACAAGGTTAAACTGCTACATGCTGAATTTGTTTGGACAGAACCCCATTCCAAGAGGATCAAGGTGAAGTTGAAAGTTCAGAAAGAAGTCCTTCATGGAGCAATTTTAGAACAGTCCTATGTTGTTGAGTATGTTGTACAGGATCACTTGTGCGAGTCTTGCTCAAGGGTCCAGGCCAATCCTGACCAGTGGGTTGCTTCTGTTCAACTCCGGCAGCACGTTCCTCACCGGCGTACCTTTTTCTTCTTGGAGCAACTGATATTAAAGCACAGTGCTGCTGCCAATGCCATAAGGATAAAACAGATGGATCAAGGTATTGACTTTTTCTTTTCTAATAGGAGTCATGGTGTCAAGTTTGTGGAATTTATTGGAAAGGTTGCTCCAATTAGGAGCCGCCAAGATAAACAACTTGTTTCTCATGATTCTAAGAGTAACGTTCACAACTATAAGCACACGTTCTCCGTTGAATTATCTCCAATATGTCGCGAGGATTTGATATGCTTGCCTCCTAAAGTTGCTGTTAGTTTGGGCAATATTGGCCCTCTTGTAATTTGCACTAAAGTTACAAACTCCGTGGCTTTGCTTGATCCATTAACCTTAAGGCACTGCTTCTTGGATGCGGAGCAGTATTGGAGGACATCCTTTAAGCCTCTACTCACTAGCAGGCAGCTTGTCGAATATATCGTTTTAGATATTGAGAATGTGTCTACTGAAGTCAATGTCAGTGGTTCGAAGTATATTTTGGCCGATGCTCAGATAGCTCGTGTATCAGACTTTGGAAGGAATGACACGATATTCAACATAAGAACCCATCTGGGTCATATTCTAAACCCTGGGGATTATGCCCTTGGTTATGATCTCTATAGAGCCAATAGTAATGATATGGAGCTAGAAAAATATAAGGGCCTTCAACTTCCAGAAGCTATTTTAATCAAGAAGAGTTATGAAGAAAAACGCCAGAGAAAGCGTGGGAAGCCTCGATCGTGGAAGCTAAAATCTCTTGAAATGGAGGTTGATGATAAAGATCAAGGTAGAGCAGAGCAAGATAAGATGCACTCGGAGTACGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATTTGAGGTTCAACATATCGTTGTACCGAAATCGAGAATACCAACCGTCTGAAATGACTGATGGGGAAGATGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATTTAAGTGGAGGGGATGGGGACAATGGCATGCACGAGTAA

Protein sequence

MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEELLADLDLSGGDGDNGMHE

Homology

[Close]

BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match: Q6P2Z6 (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 8.2e-128
Identity = 227/497 (45.67%), Postives = 334/497 (67.20%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL  +VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQM 194
           +Y+VQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    N +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
             G+DF+++++ H  K VEF+    P R +  ++L+SHD  +N +NYK TFSVE+ P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+++ L+DP TL+   +D   YWR+ F  L   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312

Query: 315 QLVEYIVLDIENVSTEVNVSG-----SKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
           QL E+IV+D + V      +G     +K+ILA+  + + S+       ++ RTHLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEME 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  ++++R   R+WKLK +E +
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRR---RNWKLKEIERD 432

Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLE 494
            +  D     Q      Y+ FL DLEE+  +R N+++Y+N        TD E  P + L 
Sbjct: 433 REGMDTDDERQ------YQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLA 492

Query: 495 ELLAD----LDLSGGDG 502
           E+L D    LD +GG+G
Sbjct: 493 EMLEDLHISLDATGGEG 498

[Close]

BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match: Q6GNS3 (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.1e-127
Identity = 225/489 (46.01%), Postives = 333/489 (68.10%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++  C  CE YLQPP TWI+  
Sbjct: 13  GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73  LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQM 194
           +YVVQ  +C+ C RV+A  D W A VQ+RQ V H++TF++LEQ ILKH    N +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
             G+DF+++++ HG K VEF+    P R +  ++L+SHD  +N +NYK TFSVE+ P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
           ++L+CL PK+A SLGN+  + IC +VT+++ L+DP TL+   +D   YWR  F  L   +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312

Query: 315 QLVEYIVLDIENVSTEVNVSG-----SKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
           Q+ E+IV+D E +      +G     +K++LA+  + + S+       ++ RTHLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372

Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEME 434
           PGD  LG+DL   N ND  + K     +P+ +LIKKSY+  R+++R   R+WKLK +   
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLKEM--- 432

Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLE 494
             D+D+   + D    +Y+ FL DLEE+  LR N+++++N        TD E  P + L 
Sbjct: 433 --DRDREGMDTDD-ERQYQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLA 490

Query: 495 ELLADLDLS 498
           E+L DL +S
Sbjct: 493 EMLEDLHIS 490

[Close]

BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match: Q5BLF0 (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-124
Identity = 225/498 (45.18%), Postives = 332/498 (66.67%), Query Frame = 0


Query: 15  GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
           G++LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI  C  CE YLQPP +W++  
Sbjct: 13  GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72

Query: 75  LESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
           LES+ELL  C+K+LK +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GAIL+Q + V
Sbjct: 73  LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132

Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQM 194
           E+VVQ  +CE C RV+A  D W A VQ+RQ   H++TF++LEQLILKH    N +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192

Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
            +GIDF+++ + H  K V+F+    P RS+  ++L+SHD  SN +NYK TFSVE+ P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252

Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
           ++++CL P++A SLGN+G + +C +VT+S+ L+DP TL+   +D   +WR  F  L + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312

Query: 315 QLVEYIVLDIENVSTE-----VNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
           QL E+I++DI+ +  +       +  +K+ LA+  + + S+   +   ++ RT +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQ-YHCRTFMGHLLN 372

Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEME 434
            GD  LG+D   AN ND  L K     +P+ +LIKKSY+   + KR + R WKLK ++ E
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432

Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGED--GPSVP 494
            D  D     Q      Y +FL DLEE+  LR NI+++R+    P E +D +D   P + 
Sbjct: 433 KDAADTDDERQ------YTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRIS 492

Query: 495 LEELLADLDLSGGDGDNG 505
           L E+L DL LS   G  G
Sbjct: 493 LAEMLEDLSLSDATGGEG 499

[Close]

BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match: Q55BF2 (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-123
Identity = 222/459 (48.37%), Postives = 321/459 (69.93%), Query Frame = 0


Query: 16  SVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQL 75
           ++LCC CG+ +  N +NMCV C+ S+VDITEG+ KQLTI  C  C  YLQPP  W  A+L
Sbjct: 11  NILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAEL 70

Query: 76  ESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEY 135
           ES+ELLT CIKR+K LNKVKL+ A +VWTEPHSKR+KVKL +QKEV   AIL+Q +++E+
Sbjct: 71  ESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEF 130

Query: 136 VVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQMDQ 195
           +VQ   C+ C + +A  D W + VQLRQ V H+RTF ++EQLILKH+A +  + IK+   
Sbjct: 131 IVQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPD 190

Query: 196 GIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICRED 255
           G+DFFFSNR+H +KFVEFI  + P+++++ +QL+S D ++N  NYK+TFSVE+ P+ ++D
Sbjct: 191 GLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDD 250

Query: 256 LICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSRQL 315
           ++CLPPK+A  LGN+GPLV+ TKV+N +  +DP TL    + A  +W + F+ L + +QL
Sbjct: 251 IVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQL 310

Query: 316 VEYIVLDIENVSTEVNVSGS---KYILADAQIARVSDFGRNDTIFNIRTHLGHILNPGDY 375
           VE+ VLD       VN++G+   +Y L+D Q+ R +DFG ND I++IR+HLG+ILNPGD 
Sbjct: 311 VEFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDL 370

Query: 376 ALGYDLYRANSNDMELE-KYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMEVDD 435
           ALGYD+  +N  D +L    K  QLP+ +L+KK+Y  K   +    R W  K +  E  +
Sbjct: 371 ALGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFR--FKRHWYFKEIPKEGIE 430

Query: 436 KDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNRE 471
             + + E D+M  + E+FLR++E +P+LR  I++Y+  +
Sbjct: 431 NPK-KFEIDQMERDREEFLREIEADPELRSKINIYKEAD 458

[Close]

BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match: Q08DS5 (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.0e-121
Identity = 222/506 (43.87%), Postives = 330/506 (65.22%), Query Frame = 0


Query: 10  VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 69
           V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I  C  C+ Y QPP T
Sbjct: 8   VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67

Query: 70  WIKAQLESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILE 129
           W++  LES++LL  C+K++K  L+KV+L+ A FVWTEPHSKR+KVKL +QKEV++GAIL+
Sbjct: 68  WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127

Query: 130 QSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAI 189
           Q +VV+YVVQ  +C  C RV+A  D W A VQ+RQ   H++TF++LEQLILK+    N +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187

Query: 190 RIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVEL 249
           RIK++  G+DF++S++ H  K VEF+    P R +  ++L+S D  SN +NYK TFSVE+
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247

Query: 250 SPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKP 309
            PIC+++++CL PK+A SLGN+  + +C +VT+ + L+DP TL+   +D   +W   F  
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307

Query: 310 LLTSRQLVEYIVLDIENV-----STEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHL 369
           L   +QL E+IV++   V     S    +   K+ L +  + + S+   +   F  RTHL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYF-CRTHL 367

Query: 370 GHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLK 429
           GH+LNPGD  LG+DL   N ND  + K K  ++P+ +LIKKSY+  R+++R   R+WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427

Query: 430 SLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGP 489
            L  + ++ D     Q      Y+ FL DLEE+  +R N+++YR+        TD E  P
Sbjct: 428 ELARDRENTDTDDERQ------YQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAP 487

Query: 490 SVPLEELLADL----DLSGGDGDNGM 506
            + L E+L DL    D +GG+G++ M
Sbjct: 488 RISLAEMLEDLHISQDATGGEGESMM 502

[Close]

BLAST of Csor.00g272870 vs. NCBI nr
Match: KAG6586102.1 (60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020926.1 60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1017 bits (2629), Expect = 0.0
Identity = 507/507 (100.00%), Postives = 507/507 (100.00%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
           DGPSVPLEELLADLDLSGGDGDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507

[Close]

BLAST of Csor.00g272870 vs. NCBI nr
Match: XP_022938070.1 (60S ribosomal export protein NMD3-like [Cucurbita moschata])

HSP 1 Score: 1008 bits (2606), Expect = 0.0
Identity = 502/507 (99.01%), Postives = 505/507 (99.61%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESK+LLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGA+LEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSLEM+VDDKDQGRAEQDKMH EYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDKDQGRAEQDKMHLEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
           DGPSVPLEELLADLDLS GDGDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGDGDNGMHE 507

[Close]

BLAST of Csor.00g272870 vs. NCBI nr
Match: XP_022965515.1 (60S ribosomal export protein NMD3-like [Cucurbita maxima])

HSP 1 Score: 1004 bits (2595), Expect = 0.0
Identity = 500/507 (98.62%), Postives = 504/507 (99.41%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQ+ESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQIESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSV+LLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVSLLDPLTLRHCFLDAEQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSL M+VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYR+REYQPSEMTDGE
Sbjct: 421 KLKSLAMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRDREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
           DGPSVPLEELLADLDLS G GDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGGGDNGMHE 507

[Close]

BLAST of Csor.00g272870 vs. NCBI nr
Match: XP_022978473.1 (60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978475.1 60S ribosomal export protein NMD3-like [Cucurbita maxima])

HSP 1 Score: 944 bits (2439), Expect = 0.0
Identity = 467/509 (91.75%), Postives = 491/509 (96.46%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           H AAANAIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHDSKSNVHNY
Sbjct: 181 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLR+CFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGL+LPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSLEM+VDD+  GRAE+DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDR--GRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLS--GGDGDNGMHE 507
           DGPSVPLEELLADLDL    GDGD+GM E
Sbjct: 481 DGPSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of Csor.00g272870 vs. NCBI nr
Match: XP_038883907.1 (60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida])

HSP 1 Score: 941 bits (2432), Expect = 0.0
Identity = 465/507 (91.72%), Postives = 489/507 (96.45%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MA ETGLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 97  MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 156

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 157 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 216

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 217 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 276

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           H AAA+AIRIKQMDQGIDFFFSNRSHGVKFVEFIGKV  IRSR DKQLVSHD KSN+HN+
Sbjct: 277 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVVSIRSRHDKQLVSHDPKSNIHNH 336

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLRHCFLDAEQ
Sbjct: 337 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDAEQ 396

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+AR+SDFGRNDTIF+I+
Sbjct: 397 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARLSDFGRNDTIFSIK 456

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMELEKYKGL+LP+AILIKKSYEEKR RKRGKPR+W
Sbjct: 457 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPDAILIKKSYEEKRLRKRGKPRAW 516

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSLEM+VDDK  G+AE+DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 517 KLKSLEMDVDDK--GKAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 576

Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
           DGPSVPLEELLADLDLS G+GDN M E
Sbjct: 577 DGPSVPLEELLADLDLSEGEGDNDMDE 601

[Close]

BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match: A0A6J1FIM4 (60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111444268 PE=3 SV=1)

HSP 1 Score: 1008 bits (2606), Expect = 0.0
Identity = 502/507 (99.01%), Postives = 505/507 (99.61%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESK+LLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGA+LEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSLEM+VDDKDQGRAEQDKMH EYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDKDQGRAEQDKMHLEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
           DGPSVPLEELLADLDLS GDGDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGDGDNGMHE 507

[Close]

BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match: A0A6J1HNX8 (60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111465396 PE=3 SV=1)

HSP 1 Score: 1004 bits (2595), Expect = 0.0
Identity = 500/507 (98.62%), Postives = 504/507 (99.41%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQ+ESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQIESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSV+LLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVSLLDPLTLRHCFLDAEQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSL M+VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYR+REYQPSEMTDGE
Sbjct: 421 KLKSLAMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRDREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
           DGPSVPLEELLADLDLS G GDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGGGDNGMHE 507

[Close]

BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match: A0A6J1IT79 (60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE=3 SV=1)

HSP 1 Score: 944 bits (2439), Expect = 0.0
Identity = 467/509 (91.75%), Postives = 491/509 (96.46%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           H AAANAIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHDSKSNVHNY
Sbjct: 181 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLR+CFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGL+LPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSLEM+VDD+  GRAE+DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDR--GRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLS--GGDGDNGMHE 507
           DGPSVPLEELLADLDL    GDGD+GM E
Sbjct: 481 DGPSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match: A0A6J1GFH4 (60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 PE=3 SV=1)

HSP 1 Score: 941 bits (2431), Expect = 0.0
Identity = 465/509 (91.36%), Postives = 491/509 (96.46%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           H AAA+AIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHDSKSNVHNY
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLR+CFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDME+EKYKGL+LPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSLEM+VDD+  GRA++DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDR--GRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLS--GGDGDNGMHE 507
           DGPSVPLEELLADLDL    GDGD+GM E
Sbjct: 481 DGPSVPLEELLADLDLDEGDGDGDDGMDE 507

[Close]

BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match: A0A6J1D613 (60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597 PE=3 SV=1)

HSP 1 Score: 938 bits (2424), Expect = 0.0
Identity = 462/507 (91.12%), Postives = 487/507 (96.06%), Query Frame = 0


Query: 1   MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
           MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1   MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60

Query: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
           ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61  ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120

Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
           VL+GAILEQSYV EYVVQDH+CESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLNGAILEQSYVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180

Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
           H AAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240

Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
           KHTFSVE+ PICREDLICLPPKVAVSLGN+GPLVICTKVTNS+ALLDP TLRHCFLDA+Q
Sbjct: 241 KHTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300

Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
           YWRTSF+ LLTSRQLVEYI+LDIENVS EVNV GSKY+LADAQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIR 360

Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
           THLGHILNPGDYALGYDLY ANSNDMEL+KYKGL LPEAIL+KKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAW 420

Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
           KLKSL+M+VDDK  GR +QDKM+SEYEQFLRDLEENPDLRFNISLYRNREYQ SEMTDGE
Sbjct: 421 KLKSLDMDVDDK--GRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGE 480

Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
           DGPSVPLEELLADLDLS  D D+GM+E
Sbjct: 481 DGPSVPLEELLADLDLSEQDEDDGMNE 505

[Close]

BLAST of Csor.00g272870 vs. TAIR 10
Match: AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein )

HSP 1 Score: 703.4 bits (1814), Expect = 1.4e-202
Identity = 352/506 (69.57%), Postives = 416/506 (82.21%), Query Frame = 0


Query: 4   ETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63
           E+G+F VQQTIGSVLCCKCG+PMAPNAANMCV CL SEVDITEGLQK + I +CP+C  Y
Sbjct: 6   ESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCY 65

Query: 64  LQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLH 123
           LQPP+TWIK Q ESKELLTFCIKRLKNLNKVKL +AEFVWTEPHSKRIKVKL VQ EVL+
Sbjct: 66  LQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLN 125

Query: 124 GAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSA 183
           GA+LEQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQHV HRRTFF+LEQLIL+H A
Sbjct: 126 GAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDA 185

Query: 184 AANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHT 243
           A+ AIRI+Q+DQGIDFFF N+SH   FVEF+ KV PI  RQD+QLVSHD KS+++NYK+T
Sbjct: 186 ASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYT 245

Query: 244 FSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWR 303
           +SV++ P+CREDL+CLP KVA  LGN+GPLV+CTKV++++ LLDP TLR  FLDA QYWR
Sbjct: 246 YSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWR 305

Query: 304 TSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHL 363
           + F+  LTSRQLV+Y V D+E    E  V G KY L+  QIAR SD G+   +F ++THL
Sbjct: 306 SGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHL 365

Query: 364 GHILNPGDYALGYDLYRANSNDMELEKYK---GLQLPEAILIKKSYEEKRQRKRGKPRSW 423
           GHIL PGD ALGYD+Y AN ND E+EKY+      LPEAILIKK YEE+R+RK+ K R+W
Sbjct: 366 GHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNW 425

Query: 424 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MT 483
           KLKSL ME+DD  +GR + +K   EYE+FLRDLEENP+LRFNISLYR+++YQ SE   MT
Sbjct: 426 KLKSLPMEMDD-SRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMT 485

Query: 484 DGEDGPSVPLEELLADLDLSGGDGDN 504
           DGE  PSVP+EELLADLDLS  + D+
Sbjct: 486 DGEGAPSVPIEELLADLDLSFEEEDD 507

The following BLAST results are available for this feature:

BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P2Z6	8.2e-128	45.67	60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=...	[more]
Q6GNS3	3.1e-127	46.01	60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1	[more]
Q5BLF0	1.1e-124	45.18	60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1	[more]
Q55BF2	1.6e-123	48.37	60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 P...	[more]
Q08DS5	2.0e-121	43.87	60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1	[more]

BLAST of Csor.00g272870 vs. NCBI nr


Match Name	Identity	Description
KAG6586102.1	100.00	60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022938070.1	99.01	60S ribosomal export protein NMD3-like [Cucurbita moschata]	[more]
XP_022965515.1	98.62	60S ribosomal export protein NMD3-like [Cucurbita maxima]	[more]
XP_022978473.1	91.75	60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ri...	[more]
XP_038883907.1	91.72	60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida]	[more]

BLAST of Csor.00g272870 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FIM4	99.01	60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111444268 ...	[more]
A0A6J1HNX8	98.62	60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111465396 PE...	[more]
A0A6J1IT79	91.75	60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE...	[more]
A0A6J1GFH4	91.36	60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 ...	[more]
A0A6J1D613	91.12	60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597...	[more]

BLAST of Csor.00g272870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03820.1	1.4e-202	69.57	nonsense-mediated mRNA decay NMD3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007064	Nmd3, N-terminal	PFAM	PF04981	NMD3	coord: 19..248 e-value: 4.4E-74 score: 249.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..443
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..443
None	No IPR available	PANTHER	PTHR12746:SF4	60S RIBOSOMAL EXPORT PROTEIN NMD3	coord: 1..500
IPR039768	Ribosomal export protein Nmd3	PANTHER	PTHR12746	NONSENSE-MEDIATED MRNA DECAY PROTEIN 3	coord: 1..500

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g272870.m01	Csor.00g272870.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0000055	ribosomal large subunit export from nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043023	ribosomal large subunit binding