Homology
BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match:
Q6P2Z6 (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)
HSP 1 Score: 458.8 bits (1179), Expect = 8.2e-128
Identity = 227/497 (45.67%), Postives = 334/497 (67.20%), Query Frame = 0
Query: 15 GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
G++LCC+CGIP+ PN ANMCV CL +VDI+EG+ KQ+++ C CE YLQPP TWI+
Sbjct: 13 GNILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72
Query: 75 LESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73 LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132
Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQM 194
+Y+VQ +C+ C RV+A D W A VQ+RQ V H++TF++LEQ ILKH N +R+K++
Sbjct: 133 DYIVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192
Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
G+DF+++++ H K VEF+ P R + ++L+SHD +N +NYK TFSVE+ P+C+
Sbjct: 193 HDGLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252
Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
++L+CL PK+A SLGN+ + IC +VT+++ L+DP TL+ +D YWR+ F L +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPK 312
Query: 315 QLVEYIVLDIENVSTEVNVSG-----SKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
QL E+IV+D + V +G +K+ILA+ + + S+ ++ RTHLGH+LN
Sbjct: 313 QLEEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372
Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEME 434
PGD LG+DL N ND + K +P+ +LIKKSY+ ++++R R+WKLK +E +
Sbjct: 373 PGDLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYDRTKRQRR---RNWKLKEIERD 432
Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLE 494
+ D Q Y+ FL DLEE+ +R N+++Y+N TD E P + L
Sbjct: 433 REGMDTDDERQ------YQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLA 492
Query: 495 ELLAD----LDLSGGDG 502
E+L D LD +GG+G
Sbjct: 493 EMLEDLHISLDATGGEG 498
BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match:
Q6GNS3 (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)
HSP 1 Score: 456.8 bits (1174), Expect = 3.1e-127
Identity = 225/489 (46.01%), Postives = 333/489 (68.10%), Query Frame = 0
Query: 15 GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
G++LCC+CGIP+ PN ANMCV CL ++VDI+EG+ KQ+++ C CE YLQPP TWI+
Sbjct: 13 GNILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCA 72
Query: 75 LESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KVKL +QKEV++GAIL+Q +VV
Sbjct: 73 LESRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVV 132
Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQM 194
+YVVQ +C+ C RV+A D W A VQ+RQ V H++TF++LEQ ILKH N +R+K++
Sbjct: 133 DYVVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEI 192
Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
G+DF+++++ HG K VEF+ P R + ++L+SHD +N +NYK TFSVE+ P+C+
Sbjct: 193 HDGLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCK 252
Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
++L+CL PK+A SLGN+ + IC +VT+++ L+DP TL+ +D YWR F L +
Sbjct: 253 DNLVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPK 312
Query: 315 QLVEYIVLDIENVSTEVNVSG-----SKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
Q+ E+IV+D E + +G +K++LA+ + + S+ ++ RTHLGH+LN
Sbjct: 313 QMEEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLN 372
Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEME 434
PGD LG+DL N ND + K +P+ +LIKKSY+ R+++R R+WKLK +
Sbjct: 373 PGDLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLKEM--- 432
Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLE 494
D+D+ + D +Y+ FL DLEE+ LR N+++++N TD E P + L
Sbjct: 433 --DRDREGMDTDD-ERQYQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLA 490
Query: 495 ELLADLDLS 498
E+L DL +S
Sbjct: 493 EMLEDLHIS 490
BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match:
Q5BLF0 (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)
HSP 1 Score: 448.4 bits (1152), Expect = 1.1e-124
Identity = 225/498 (45.18%), Postives = 332/498 (66.67%), Query Frame = 0
Query: 15 GSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQ 74
G++LCC CG+P+ PN ANMCV CL ++VDI+EG+ KQ+TI C CE YLQPP +W++
Sbjct: 13 GNILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCA 72
Query: 75 LESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVV 134
LES+ELL C+K+LK +++KV+L+ A F+WTEPHSKRIK+KL +QKEV++GAIL+Q + V
Sbjct: 73 LESRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTV 132
Query: 135 EYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQM 194
E+VVQ +CE C RV+A D W A VQ+RQ H++TF++LEQLILKH N +RIK++
Sbjct: 133 EFVVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEI 192
Query: 195 DQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICR 254
+GIDF+++ + H K V+F+ P RS+ ++L+SHD SN +NYK TFSVE+ P+C+
Sbjct: 193 HEGIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCK 252
Query: 255 EDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSR 314
++++CL P++A SLGN+G + +C +VT+S+ L+DP TL+ +D +WR F L + R
Sbjct: 253 DNVVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPR 312
Query: 315 QLVEYIVLDIENVSTE-----VNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILN 374
QL E+I++DI+ + + + +K+ LA+ + + S+ + ++ RT +GH+LN
Sbjct: 313 QLEEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQ-YHCRTFMGHLLN 372
Query: 375 PGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEME 434
GD LG+D AN ND L K +P+ +LIKKSY+ + KR + R WKLK ++ E
Sbjct: 373 IGDLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDRE 432
Query: 435 VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGED--GPSVP 494
D D Q Y +FL DLEE+ LR NI+++R+ P E +D +D P +
Sbjct: 433 KDAADTDDERQ------YTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRIS 492
Query: 495 LEELLADLDLSGGDGDNG 505
L E+L DL LS G G
Sbjct: 493 LAEMLEDLSLSDATGGEG 499
BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match:
Q55BF2 (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 PE=3 SV=1)
HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-123
Identity = 222/459 (48.37%), Postives = 321/459 (69.93%), Query Frame = 0
Query: 16 SVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTWIKAQL 75
++LCC CG+ + N +NMCV C+ S+VDITEG+ KQLTI C C YLQPP W A+L
Sbjct: 11 NILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAEL 70
Query: 76 ESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQSYVVEY 135
ES+ELLT CIKR+K LNKVKL+ A +VWTEPHSKR+KVKL +QKEV AIL+Q +++E+
Sbjct: 71 ESRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEF 130
Query: 136 VVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRIKQMDQ 195
+VQ C+ C + +A D W + VQLRQ V H+RTF ++EQLILKH+A + + IK+
Sbjct: 131 IVQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPD 190
Query: 196 GIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSPICRED 255
G+DFFFSNR+H +KFVEFI + P+++++ +QL+S D ++N NYK+TFSVE+ P+ ++D
Sbjct: 191 GLDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDD 250
Query: 256 LICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLLTSRQL 315
++CLPPK+A LGN+GPLV+ TKV+N + +DP TL + A +W + F+ L + +QL
Sbjct: 251 IVCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQL 310
Query: 316 VEYIVLDIENVSTEVNVSGS---KYILADAQIARVSDFGRNDTIFNIRTHLGHILNPGDY 375
VE+ VLD VN++G+ +Y L+D Q+ R +DFG ND I++IR+HLG+ILNPGD
Sbjct: 311 VEFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDL 370
Query: 376 ALGYDLYRANSNDMELE-KYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMEVDD 435
ALGYD+ +N D +L K QLP+ +L+KK+Y K + R W K + E +
Sbjct: 371 ALGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFR--FKRHWYFKEIPKEGIE 430
Query: 436 KDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNRE 471
+ + E D+M + E+FLR++E +P+LR I++Y+ +
Sbjct: 431 NPK-KFEIDQMERDREEFLREIEADPELRSKINIYKEAD 458
BLAST of Csor.00g272870 vs. ExPASy Swiss-Prot
Match:
Q08DS5 (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)
HSP 1 Score: 437.6 bits (1124), Expect = 2.0e-121
Identity = 222/506 (43.87%), Postives = 330/506 (65.22%), Query Frame = 0
Query: 10 VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRT 69
V+ T G +LCC CG+P++PN AN+CV CL S+VDI++G+ KQ++I C C+ Y QPP T
Sbjct: 8 VKHTPGHILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGT 67
Query: 70 WIKAQLESKELLTFCIKRLK-NLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILE 129
W++ LES++LL C+K++K L+KV+L+ A FVWTEPHSKR+KVKL +QKEV++GAIL+
Sbjct: 68 WVQCALESRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQ 127
Query: 130 QSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAI 189
Q +VV+YVVQ +C C RV+A D W A VQ+RQ H++TF++LEQLILK+ N +
Sbjct: 128 QVFVVDYVVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTL 187
Query: 190 RIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVEL 249
RIK++ G+DF++S++ H K VEF+ P R + ++L+S D SN +NYK TFSVE+
Sbjct: 188 RIKEIHDGLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEI 247
Query: 250 SPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKP 309
PIC+++++CL PK+A SLGN+ + +C +VT+ + L+DP TL+ +D +W F
Sbjct: 248 VPICKDNVVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNS 307
Query: 310 LLTSRQLVEYIVLDIENV-----STEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHL 369
L +QL E+IV++ V S + K+ L + + + S+ + F RTHL
Sbjct: 308 LCHPKQLEEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYF-CRTHL 367
Query: 370 GHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLK 429
GH+LNPGD LG+DL N ND + K K ++P+ +LIKKSY+ R+++R R+WKLK
Sbjct: 368 GHLLNPGDLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLK 427
Query: 430 SLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGP 489
L + ++ D Q Y+ FL DLEE+ +R N+++YR+ TD E P
Sbjct: 428 ELARDRENTDTDDERQ------YQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAP 487
Query: 490 SVPLEELLADL----DLSGGDGDNGM 506
+ L E+L DL D +GG+G++ M
Sbjct: 488 RISLAEMLEDLHISQDATGGEGESMM 502
BLAST of Csor.00g272870 vs. NCBI nr
Match:
KAG6586102.1 (60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020926.1 60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1017 bits (2629), Expect = 0.0
Identity = 507/507 (100.00%), Postives = 507/507 (100.00%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
DGPSVPLEELLADLDLSGGDGDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
BLAST of Csor.00g272870 vs. NCBI nr
Match:
XP_022938070.1 (60S ribosomal export protein NMD3-like [Cucurbita moschata])
HSP 1 Score: 1008 bits (2606), Expect = 0.0
Identity = 502/507 (99.01%), Postives = 505/507 (99.61%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTWIKAQLESK+LLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGA+LEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSLEM+VDDKDQGRAEQDKMH EYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDKDQGRAEQDKMHLEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
DGPSVPLEELLADLDLS GDGDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGDGDNGMHE 507
BLAST of Csor.00g272870 vs. NCBI nr
Match:
XP_022965515.1 (60S ribosomal export protein NMD3-like [Cucurbita maxima])
HSP 1 Score: 1004 bits (2595), Expect = 0.0
Identity = 500/507 (98.62%), Postives = 504/507 (99.41%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTWIKAQ+ESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWIKAQIESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSV+LLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVSLLDPLTLRHCFLDAEQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSL M+VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYR+REYQPSEMTDGE
Sbjct: 421 KLKSLAMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRDREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
DGPSVPLEELLADLDLS G GDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGGGDNGMHE 507
BLAST of Csor.00g272870 vs. NCBI nr
Match:
XP_022978473.1 (60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978475.1 60S ribosomal export protein NMD3-like [Cucurbita maxima])
HSP 1 Score: 944 bits (2439), Expect = 0.0
Identity = 467/509 (91.75%), Postives = 491/509 (96.46%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
H AAANAIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHDSKSNVHNY
Sbjct: 181 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLR+CFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLY ANSNDME+EKYKGL+LPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSLEM+VDD+ GRAE+DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDR--GRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLS--GGDGDNGMHE 507
DGPSVPLEELLADLDL GDGD+GM E
Sbjct: 481 DGPSVPLEELLADLDLDEGDGDGDDGMDE 507
BLAST of Csor.00g272870 vs. NCBI nr
Match:
XP_038883907.1 (60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida])
HSP 1 Score: 941 bits (2432), Expect = 0.0
Identity = 465/507 (91.72%), Postives = 489/507 (96.45%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MA ETGLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 97 MAAETGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 156
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 157 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 216
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 217 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 276
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
H AAA+AIRIKQMDQGIDFFFSNRSHGVKFVEFIGKV IRSR DKQLVSHD KSN+HN+
Sbjct: 277 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVVSIRSRHDKQLVSHDPKSNIHNH 336
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLRHCFLDAEQ
Sbjct: 337 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDAEQ 396
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+AR+SDFGRNDTIF+I+
Sbjct: 397 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARLSDFGRNDTIFSIK 456
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLY ANSNDMELEKYKGL+LP+AILIKKSYEEKR RKRGKPR+W
Sbjct: 457 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPDAILIKKSYEEKRLRKRGKPRAW 516
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSLEM+VDDK G+AE+DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 517 KLKSLEMDVDDK--GKAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 576
Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
DGPSVPLEELLADLDLS G+GDN M E
Sbjct: 577 DGPSVPLEELLADLDLSEGEGDNDMDE 601
BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match:
A0A6J1FIM4 (60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111444268 PE=3 SV=1)
HSP 1 Score: 1008 bits (2606), Expect = 0.0
Identity = 502/507 (99.01%), Postives = 505/507 (99.61%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTWIKAQLESK+LLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWIKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGA+LEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGALLEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSLEM+VDDKDQGRAEQDKMH EYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDKDQGRAEQDKMHLEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
DGPSVPLEELLADLDLS GDGDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGDGDNGMHE 507
BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match:
A0A6J1HNX8 (60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111465396 PE=3 SV=1)
HSP 1 Score: 1004 bits (2595), Expect = 0.0
Identity = 500/507 (98.62%), Postives = 504/507 (99.41%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTWIKAQ+ESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWIKAQIESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY
Sbjct: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSV+LLDPLTLRHCFLDAEQ
Sbjct: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVSLLDPLTLRHCFLDAEQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR
Sbjct: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW
Sbjct: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSL M+VDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYR+REYQPSEMTDGE
Sbjct: 421 KLKSLAMDVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRDREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
DGPSVPLEELLADLDLS G GDNGMHE
Sbjct: 481 DGPSVPLEELLADLDLSEGGGDNGMHE 507
BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match:
A0A6J1IT79 (60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE=3 SV=1)
HSP 1 Score: 944 bits (2439), Expect = 0.0
Identity = 467/509 (91.75%), Postives = 491/509 (96.46%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
H AAANAIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHDSKSNVHNY
Sbjct: 181 HGAAANAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLR+CFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLY ANSNDME+EKYKGL+LPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSLEM+VDD+ GRAE+DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDR--GRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLS--GGDGDNGMHE 507
DGPSVPLEELLADLDL GDGD+GM E
Sbjct: 481 DGPSVPLEELLADLDLDEGDGDGDDGMDE 507
BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match:
A0A6J1GFH4 (60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 PE=3 SV=1)
HSP 1 Score: 941 bits (2431), Expect = 0.0
Identity = 465/509 (91.36%), Postives = 491/509 (96.46%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTW+KAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWLKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VLHGAILEQSYV EYVVQDHLCESC+RVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLHGAILEQSYVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
H AAA+AIRIKQMD+GIDFFFSNRSH VKFVEFIGKVAPIRSR DKQLVSHDSKSNVHNY
Sbjct: 181 HGAAASAIRIKQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNY 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVE+SPICREDLICLPPKVAVSLGN+GPLVICTKVTN++ALLDP TLR+CFLDA+Q
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSF+ LLTSRQLVEY+VLDIENVSTEVNV+GSKY+LA AQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLY ANSNDME+EKYKGL+LPEAILIKKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSLEM+VDD+ GRA++DK +SEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE
Sbjct: 421 KLKSLEMDVDDR--GRADEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLS--GGDGDNGMHE 507
DGPSVPLEELLADLDL GDGD+GM E
Sbjct: 481 DGPSVPLEELLADLDLDEGDGDGDDGMDE 507
BLAST of Csor.00g272870 vs. ExPASy TrEMBL
Match:
A0A6J1D613 (60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597 PE=3 SV=1)
HSP 1 Score: 938 bits (2424), Expect = 0.0
Identity = 462/507 (91.12%), Postives = 487/507 (96.06%), Query Frame = 0
Query: 1 MAGETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
MAGE GLF VQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC
Sbjct: 1 MAGEAGLFAVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKE 120
ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKL+HAEFVWTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 121 VLHGAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
VL+GAILEQSYV EYVVQDH+CESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK
Sbjct: 121 VLNGAILEQSYVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 181 HSAAANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNY 240
H AAA+AIRIKQMDQGIDFFFSNRSHGVKFVEF+GKVAPIRSR DKQLVSHD KSN+HN+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
Query: 241 KHTFSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQ 300
KHTFSVE+ PICREDLICLPPKVAVSLGN+GPLVICTKVTNS+ALLDP TLRHCFLDA+Q
Sbjct: 241 KHTFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQ 300
Query: 301 YWRTSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIR 360
YWRTSF+ LLTSRQLVEYI+LDIENVS EVNV GSKY+LADAQ+ARVSDFGRNDTIF+IR
Sbjct: 301 YWRTSFRSLLTSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIR 360
Query: 361 THLGHILNPGDYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSW 420
THLGHILNPGDYALGYDLY ANSNDMEL+KYKGL LPEAIL+KKSYEEKRQRKRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAW 420
Query: 421 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGE 480
KLKSL+M+VDDK GR +QDKM+SEYEQFLRDLEENPDLRFNISLYRNREYQ SEMTDGE
Sbjct: 421 KLKSLDMDVDDK--GRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGE 480
Query: 481 DGPSVPLEELLADLDLSGGDGDNGMHE 507
DGPSVPLEELLADLDLS D D+GM+E
Sbjct: 481 DGPSVPLEELLADLDLSEQDEDDGMNE 505
BLAST of Csor.00g272870 vs. TAIR 10
Match:
AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein )
HSP 1 Score: 703.4 bits (1814), Expect = 1.4e-202
Identity = 352/506 (69.57%), Postives = 416/506 (82.21%), Query Frame = 0
Query: 4 ETGLFTVQQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63
E+G+F VQQTIGSVLCCKCG+PMAPNAANMCV CL SEVDITEGLQK + I +CP+C Y
Sbjct: 6 ESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCY 65
Query: 64 LQPPRTWIKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLH 123
LQPP+TWIK Q ESKELLTFCIKRLKNLNKVKL +AEFVWTEPHSKRIKVKL VQ EVL+
Sbjct: 66 LQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLN 125
Query: 124 GAILEQSYVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSA 183
GA+LEQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQHV HRRTFF+LEQLIL+H A
Sbjct: 126 GAVLEQSYPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDA 185
Query: 184 AANAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHT 243
A+ AIRI+Q+DQGIDFFF N+SH FVEF+ KV PI RQD+QLVSHD KS+++NYK+T
Sbjct: 186 ASRAIRIQQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYT 245
Query: 244 FSVELSPICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWR 303
+SV++ P+CREDL+CLP KVA LGN+GPLV+CTKV++++ LLDP TLR FLDA QYWR
Sbjct: 246 YSVKICPVCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWR 305
Query: 304 TSFKPLLTSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHL 363
+ F+ LTSRQLV+Y V D+E E V G KY L+ QIAR SD G+ +F ++THL
Sbjct: 306 SGFRSALTSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHL 365
Query: 364 GHILNPGDYALGYDLYRANSNDMELEKYK---GLQLPEAILIKKSYEEKRQRKRGKPRSW 423
GHIL PGD ALGYD+Y AN ND E+EKY+ LPEAILIKK YEE+R+RK+ K R+W
Sbjct: 366 GHILKPGDQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNW 425
Query: 424 KLKSLEMEVDDKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---MT 483
KLKSL ME+DD +GR + +K EYE+FLRDLEENP+LRFNISLYR+++YQ SE MT
Sbjct: 426 KLKSLPMEMDD-SRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMT 485
Query: 484 DGEDGPSVPLEELLADLDLSGGDGDN 504
DGE PSVP+EELLADLDLS + D+
Sbjct: 486 DGEGAPSVPIEELLADLDLSFEEEDD 507
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q6P2Z6 | 8.2e-128 | 45.67 | 60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=... | [more] |
Q6GNS3 | 3.1e-127 | 46.01 | 60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1 | [more] |
Q5BLF0 | 1.1e-124 | 45.18 | 60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1 | [more] |
Q55BF2 | 1.6e-123 | 48.37 | 60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 P... | [more] |
Q08DS5 | 2.0e-121 | 43.87 | 60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6586102.1 | 0.0 | 100.00 | 60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022938070.1 | 0.0 | 99.01 | 60S ribosomal export protein NMD3-like [Cucurbita moschata] | [more] |
XP_022965515.1 | 0.0 | 98.62 | 60S ribosomal export protein NMD3-like [Cucurbita maxima] | [more] |
XP_022978473.1 | 0.0 | 91.75 | 60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ri... | [more] |
XP_038883907.1 | 0.0 | 91.72 | 60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FIM4 | 0.0 | 99.01 | 60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111444268 ... | [more] |
A0A6J1HNX8 | 0.0 | 98.62 | 60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111465396 PE... | [more] |
A0A6J1IT79 | 0.0 | 91.75 | 60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE... | [more] |
A0A6J1GFH4 | 0.0 | 91.36 | 60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111453698 ... | [more] |
A0A6J1D613 | 0.0 | 91.12 | 60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597... | [more] |
Match Name | E-value | Identity | Description | |
AT2G03820.1 | 1.4e-202 | 69.57 | nonsense-mediated mRNA decay NMD3 family protein | [more] |