Csor.00g255790 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATCACATACAATTAGTTACAAGCTTGATGACATGCAGAACTTGGTGGAAGAAAAAGACAAAAAGGTGAAGGAGTTGCAAGATAACATTGCCGCAGTCAGTTTTACTCCGTCTAGCAAGATGGGTAAAATGCTAATGGCTAAATGCAGGACTCTGCAAGAAGAAAATGAGGAGATAGGAAATCAAGCTGCTGAAGGAAAGGTATGACCACTAATTAACTTCGTGGCTATTCTGAATTTGTATTTCGACCATGTCACCTGACATTCCTATTTTCACTTTTTAACCATCTTATTACTCTATTTGGAAAAATATATATATAGATCTGGTCTCATGAAATTTTGTAGTCTATGCGTTTGTGATCAATCACGCCTCCCCTTTGACTGCAGATGCATGAATTAGGAATGAAGCTTGCCTTGCAGAAATCCCAAAATACAGAACTTAGAAGTCAATACGAAGGTCTGTAACTATCGGGAAATGCCCGTTTCTGTTGCTTGAGGTTCCTTCTGCAGCTTTTCTATTTTCAAGTTATCAGGTTTTCGTTTTTTTGAATTTTTATATTTTAACTTTTTTTTTTGCCGGTTTCCTCCCATTCGATTCTTAGTCAAAATCTGAAAACAAAAAGTACTTTTTAAAAACTAATTTTTTTCGTTTTTAAATTTAGGTTGGGATTTTAAAAACATTGGTAGAAAGTGAATGATATAAATTTAGGTTGAGTTTTTAAAAACATTGGTAGAAAGTGAATGATATAAATTTAGGTCCAGTTTTTTAAAAACATTGGAAGAAAGTGAATGGTTTAAATCTAGGACGGGTTTTTAAAAAACATTGGTAGAAAGTGAATGATTTAAATTTAGGACGGGTTTTTAAAAACATTGGTAGAAAGTGAATGATTTAAATTTAGGTCGGGGTTTTTAAAAAACATTGGTAGAAAGTGAATGATATTAATTTAGGTTGGGTTTCTTGGTAGAAAGTGAATGATATAAATTTAGGTTGGATTTTTTAAAAACATTGGTAGAAAGTGAATTATGTAAATTTAAGGTTGGGTTTTTGAAAGCATTGAAAGAAAATAGGACTTACAAGCTTATAATTTTTAGAAGTAAAAAAAATTCGAAACACCAAATAATATTATCTTATCAAATGGACCAAAATGAAATTCAATTATTATTCCGTCTGTACTTTGATGGTAAATTAAAATAGCCTTGTTGCCTGCTTAACTAATGTCCATACCTCAACTCTGAGCAGCCTTGCAGAAACATATGGAAGGACTGACAAATGACGTTGAGAGATCAAACGAATTGGTAGTCACCATCCCTATTATACGTCTGTTGCTAAGTTCTTTGTCAATTGTGATTTCTATTTTATCAGTTTCTTTTGTTTATTCTTCCTTCATGGAAATTCAGGTTATCGTTTTGCAAGAGAAACTAGCCGAGAAGGACCGCGAGCTTCAAATCTTGAAGGAAACTTTAGAACAGCCGAAGAGCCCAATAGTCGAGGATGATAAGGCTGATTCACCGCCTACCGAGAATCTGCCCAAAGACGAGGCTATGATTTCTGGCGATGCTGAAAGCTGA ATGTTATCACATACAATTAGTTACAAGCTTGATGACATGCAGAACTTGGTGGAAGAAAAAGACAAAAAGGTGAAGGAGTTGCAAGATAACATTGCCGCAGTCAGTTTTACTCCGTCTAGCAAGATGGGTAAAATGCTAATGGCTAAATGCAGGACTCTGCAAGAAGAAAATGAGGAGATAGGAAATCAAGCTGCTGAAGGAAAGGTTATCGTTTTGCAAGAGAAACTAGCCGAGAAGGACCGCGAGCTTCAAATCTTGAAGGAAACTTTAGAACAGCCGAAGAGCCCAATAGTCGAGGATGATAAGGCTGATTCACCGCCTACCGAGAATCTGCCCAAAGACGAGGCTATGATTTCTGGCGATGCTGAAAGCTGA ATGTTATCACATACAATTAGTTACAAGCTTGATGACATGCAGAACTTGGTGGAAGAAAAAGACAAAAAGGTGAAGGAGTTGCAAGATAACATTGCCGCAGTCAGTTTTACTCCGTCTAGCAAGATGGGTAAAATGCTAATGGCTAAATGCAGGACTCTGCAAGAAGAAAATGAGGAGATAGGAAATCAAGCTGCTGAAGGAAAGGTTATCGTTTTGCAAGAGAAACTAGCCGAGAAGGACCGCGAGCTTCAAATCTTGAAGGAAACTTTAGAACAGCCGAAGAGCCCAATAGTCGAGGATGATAAGGCTGATTCACCGCCTACCGAGAATCTGCCCAAAGACGAGGCTATGATTTCTGGCGATGCTGAAAGCTGA MLSHTISYKLDDMQNLVEEKDKKVKELQDNIAAVSFTPSSKMGKMLMAKCRTLQEENEEIGNQAAEGKVIVLQEKLAEKDRELQILKETLEQPKSPIVEDDKADSPPTENLPKDEAMISGDAES Homology
BLAST of Csor.00g255790 vs. ExPASy Swiss-Prot
Match: Q9ZSZ8 (FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana OX=3702 GN=FIP37 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20 Identity = 70/157 (44.59%), Postives = 88/157 (56.05%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy Swiss-Prot
Match: Q15007 (Pre-mRNA-splicing regulator WTAP OS=Homo sapiens OX=9606 GN=WTAP PE=1 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08 Identity = 31/90 (34.44%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy Swiss-Prot
Match: Q9ER69 (Pre-mRNA-splicing regulator WTAP OS=Mus musculus OX=10090 GN=Wtap PE=1 SV=3) HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08 Identity = 31/90 (34.44%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy Swiss-Prot
Match: Q7SXL7 (Pre-mRNA-splicing regulator WTAP OS=Danio rerio OX=7955 GN=wtap PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07 Identity = 31/90 (34.44%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy Swiss-Prot
Match: Q4KLT6 (Pre-mRNA-splicing regulator WTAP OS=Xenopus laevis OX=8355 GN=wtap PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07 Identity = 33/102 (32.35%), Postives = 63/102 (61.76%), Query Frame = 0
BLAST of Csor.00g255790 vs. NCBI nr
Match: KAG6603207.1 (FKBP12-interacting protein of 37 kDa, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230 bits (586), Expect = 1.06e-75 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Csor.00g255790 vs. NCBI nr
Match: KAG7023112.1 (FKBP12-interacting protein of 37 kDa [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184 bits (467), Expect = 7.50e-55 Identity = 110/154 (71.43%), Postives = 112/154 (72.73%), Query Frame = 0
BLAST of Csor.00g255790 vs. NCBI nr
Match: KAG6589432.1 (FKBP12-interacting protein of 37 kDa, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184 bits (467), Expect = 1.08e-54 Identity = 110/154 (71.43%), Postives = 112/154 (72.73%), Query Frame = 0
BLAST of Csor.00g255790 vs. NCBI nr
Match: XP_022921823.1 (FKBP12-interacting protein of 37 kDa-like [Cucurbita moschata]) HSP 1 Score: 184 bits (467), Expect = 1.08e-54 Identity = 110/154 (71.43%), Postives = 112/154 (72.73%), Query Frame = 0
BLAST of Csor.00g255790 vs. NCBI nr
Match: XP_023516421.1 (FKBP12-interacting protein of 37 kDa [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183 bits (464), Expect = 3.06e-54 Identity = 108/154 (70.13%), Postives = 112/154 (72.73%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy TrEMBL
Match: A0A6J1E4W7 (FKBP12-interacting protein of 37 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111429961 PE=3 SV=1) HSP 1 Score: 184 bits (467), Expect = 5.25e-55 Identity = 110/154 (71.43%), Postives = 112/154 (72.73%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy TrEMBL
Match: A0A6J1JJ49 (FKBP12-interacting protein of 37 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111485065 PE=3 SV=1) HSP 1 Score: 179 bits (453), Expect = 6.66e-53 Identity = 107/154 (69.48%), Postives = 111/154 (72.08%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy TrEMBL
Match: A0A6J1C1L0 (FKBP12-interacting protein of 37 kDa OS=Momordica charantia OX=3673 GN=LOC111007142 PE=3 SV=1) HSP 1 Score: 151 bits (382), Expect = 2.63e-42 Identity = 99/154 (64.29%), Postives = 104/154 (67.53%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy TrEMBL
Match: A0A5A7URS3 (FKBP12-interacting protein of 37 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001230 PE=3 SV=1) HSP 1 Score: 150 bits (380), Expect = 5.85e-42 Identity = 99/156 (63.46%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of Csor.00g255790 vs. ExPASy TrEMBL
Match: A0A1S3CM66 (FKBP12-interacting protein of 37 kDa OS=Cucumis melo OX=3656 GN=LOC103502386 PE=3 SV=1) HSP 1 Score: 150 bits (380), Expect = 5.85e-42 Identity = 99/156 (63.46%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of Csor.00g255790 vs. TAIR 10
Match: AT3G54170.1 (FKBP12 interacting protein 37 ) HSP 1 Score: 100.5 bits (249), Expect = 9.9e-22 Identity = 70/157 (44.59%), Postives = 88/157 (56.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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