Csor.00g250640 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g250640
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	54S ribosomal protein L51, mitochondrial
Location	Csor_Chr06: 11197766 .. 11200686 (+)
RNA-Seq Expression	Csor.00g250640
Synteny	Csor.00g250640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTACGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGTGGAAGCAGTAGGGGTATCAGGTTTGTTGGATTGCTAAACCATTATCTACTTGATTATTTCATTACTACTCAGATTTCATTTCTTAACTGACGGAGGTTTAAATTTTGACCTCAAAATACTTTGTATTTCCATGTTCCAGCATAATTATTTTATACTCATCTTGCTTTCTTTTAGCTTACTGGTTTGAGTTGGGTAAAAAGTTAAGGAAATTGCTTGGATTTTTTGAAATGGACTGTGCAAAGAAAAGGTGGGTTTTTTAGGGCTAGGGTTCTTGGAGAGTGCAGTAAGACCCTTACTCCTTTCTCCACCCATTTTTTCTTTTACCTAAAGCTGAATTCCTTTATTATTTTTATTTATTATTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGAGTGTGGAAACATCTCCCTTGTAGACGCGTTTTAAAAACCTTGAGGGGAAGTCCAGAAGTAAAAGTCCAAGGAGAACAATATTTGCTAGCGGTGGGCTTGAGCCGTTACATTTACCTACCTTAAACCTAGAATATGAGATCATCCTAGTTTTCTAGGAATAAGCTCGATGCTTCTGTAGTTTTATTTGATTGTTGTTATAATTATTATCTAGCTTTTACAGTGAATCAAATACTGTTTCACATGTCCTGAATGATTTGTATCTTATCATTGAACTTTCAGGGCATTTATGGACTCGCAATTGCCAGATTTTAAGAAGAAAAACCCTCAGCTAGAAGTAGTTCGTGAACTCATTCGTGGGCAGCATCCACACTTGAAGGCCTTCTACAGTAATTCTCTTTCCCTCTCTCAGCTTCTTGCAGTTATAATTTAATAGTGTTTGAACATGGAATTTCCCATATTTCATTGCCTTCACAGAGAACAATAATCAACGGGTGGTATGTGTAAGGAATTTGGATGCGGAAGAAATACATTTACATGCAACGAGGCTAAGGAATGCACTGGGGCGAAAGGTCATAAAACTGAAGACAAGACATGTGACCAAAAATCCTAGTGTGCAAGGTACGTGGAAAACTGATGTAAGATTTTGAGGATGCTTCCTAAAGTGCCTGATTTTCTTTCGAGATTGTCTTTTTCCATCAAGATTATGAGATTCCTTAATATGACGTTGTTGAAACAAAACTTCTTTTTAGAGTAGCTTGAGTTTGTAGTTTGTAGTAGTCCAACGTAAACTTTTGAGGCTATTTTGTTCCAATTCTCTGAATACTCTCTCTGGAGAAAGTCTTTCCATGAAACATGCAACAATTGCGAACTTATCTTGAATTGATGAAGCAAAACAGGATTCTGAATTTATTTGTGAACATATTTATAGGTTGTTGTGATGTTAATTAAATGAGATCCAAGAGTAAATGATATGAACTTGGTTCATATCAGTAAATGCAGCAGCTAGTCCTTGTATGGTATTCTTGGTTGGGGTATTGTCCTTTTCTTTGCCATGTTATAATAATGAATGCAAGAGTTGTTGTTTCATTTTAGATTGGTTATGTGGTTTTTTCCAGTCTTAAATGTCGATGAAAGGTTCGACCAAAATGGAGCGAAAACGGGAAGTTGGATGAAAAGAAGTGAAGGAAAGAATTACTAGTAGAAGGGGAAAAAAAAAACTAGCAAACAATAAAAGAAAAAAGATCCCGTTAGGAATCACGAACTTTCACAATAATATTGTCCACTTTGAGCATAAACTCTCATGACTTTGCTTTTGGTTTGCCCAAAGGGTCTCACGTCAATGGAGAGATTAAAGTTCGGCCATTGATAGAGAGGAATCACCTAGCTCAGAATTAGACTCAACTAACCTTAGGTAAATAGATTGCTTTGAATAGCATAGTGTTCTTAGTTTCAGGGACTGCTTTATCTACACTATGAGCAAATGTTAGACACAATATCTTGAGTATCAATGATGGTGACTACATTTGCTGGCATGTGATGTTTTGCTATAGAATTGAGTCTTTGTGAATGGGCAGAGCGAGGTACTCTTATTTTACGACGGTAGGGATGATTGCTTCTATGACTAACTAGAAAAACACCATATGCAAGCTTTTTCTTTCAATAGCCGGTGAAATGACTACATGATCATCCCTTTAATTAAACAACGTGGGACTTCCTCCCAACAATCCTTCTCAACTCTAGGTTGTCAACAACGGGAAAAAACCATCGAAAATGAGAAGAAAAAAAAGCTCAAAAACCTCAAAATTGCTTTCCTATCATCCTACAGTTGCATGCTCTTCCAAGTAGCTTAAAAAAACCCCCACAAACAAAATGAGAAGCCCCCATGTAAAACTACTTCTCTGCAGTGAAAAATTCTAAGATAAATGAAACACTAGAAGAATTAAGAAACCCCAATTTTGCATTTTTCTTTGATTATTCTTTTCAGCAACAAAAGATGGAACTCATTCTCGCCTTTGGCACAAACGAGACTCTCCTCCCAGGCTGATTGGGCGCCCCTTCTTTTCCTCCCTGATCGATTGAATGTCCTGTCATTGTCCCTCTAGAAGAGAAAACTTGTGTCGAAGTACTTTTATTTTAGCATGTCATCGAGAGAATGAATGAGTTTCGAAAACATCTGTAAAAAGTATAATTGCATGTGGCTTCTTGAAGGCTGCAATGTGGGTTCCAGGAGTCCTTGAGAGTTCAATTGCAGCCACTCCTGGAACTCTTAGCCATCCGACAGGCAATAGTTTCATCGGAGCTGAATCGAATTGTGTAGTCGTGCAAGCAAAGCTCTTGGAGCTTGTTGGCAGTGGGCTGGATGTGGATGGCATGGGGGGCCATTCCAGATTGCCTCGAACTGGCGGAAAGTTTACGATGACGAAATTGTGTAAGAGAAGAAATGACGTGTAG

mRNA sequence

ATGGCTTTACGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGTGGAAGCAGTAGGGGTATCAGGGCATTTATGGACTCGCAATTGCCAGATTTTAAGAAGAAAAACCCTCAGCTAGAAGTAGTTCGTGAACTCATTCGTGGGCAGCATCCACACTTGAAGGCCTTCTACAAGAACAATAATCAACGGGTGGTATGTGTAAGGAATTTGGATGCGGAAGAAATACATTTACATGCAACGAGGCTAAGGAATGCACTGGGGCGAAAGGTCATAAAACTGAAGACAAGACATGTGACCAAAAATCCTAGTGTGCAAGGTACGTGGAAAACTGATGCTGCAATGTGGGTTCCAGGAGTCCTTGAGAGTTCAATTGCAGCCACTCCTGGAACTCTTAGCCATCCGACAGGCAATAGTTTCATCGGAGCTGAATCGAATTGTGTAGTCGTGCAAGCAAAGCTCTTGGAGCTTGTTGGCAGTGGGCTGGATGTGGATGGCATGGGGGGCCATTCCAGATTGCCTCGAACTGGCGGAAAGTTTACGATGACGAAATTGTGTAAGAGAAGAAATGACGTGTAG

Coding sequence (CDS)

ATGGCTTTACGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGTGGAAGCAGTAGGGGTATCAGGGCATTTATGGACTCGCAATTGCCAGATTTTAAGAAGAAAAACCCTCAGCTAGAAGTAGTTCGTGAACTCATTCGTGGGCAGCATCCACACTTGAAGGCCTTCTACAAGAACAATAATCAACGGGTGGTATGTGTAAGGAATTTGGATGCGGAAGAAATACATTTACATGCAACGAGGCTAAGGAATGCACTGGGGCGAAAGGTCATAAAACTGAAGACAAGACATGTGACCAAAAATCCTAGTGTGCAAGGTACGTGGAAAACTGATGCTGCAATGTGGGTTCCAGGAGTCCTTGAGAGTTCAATTGCAGCCACTCCTGGAACTCTTAGCCATCCGACAGGCAATAGTTTCATCGGAGCTGAATCGAATTGTGTAGTCGTGCAAGCAAAGCTCTTGGAGCTTGTTGGCAGTGGGCTGGATGTGGATGGCATGGGGGGCCATTCCAGATTGCCTCGAACTGGCGGAAAGTTTACGATGACGAAATTGTGTAAGAGAAGAAATGACGTGTAG

Protein sequence

MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDAAMWVPGVLESSIAATPGTLSHPTGNSFIGAESNCVVVQAKLLELVGSGLDVDGMGGHSRLPRTGGKFTMTKLCKRRNDV

Homology

[Close]

BLAST of Csor.00g250640 vs. ExPASy Swiss-Prot
Match: Q9UUC8 (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-13
Identity = 34/104 (32.69%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 10  QKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYKNNNQRV 69
           +++  SYC+WGGSS+G++ F+ ++L    K++  +E      +G+HP ++A+Y    ++V
Sbjct: 24  RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKV 83

Query: 70  VCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTW 114
           +C R + A  I   A   R++ G K   +K    + NPSV+G W
Sbjct: 84  ICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIW 127

[Close]

BLAST of Csor.00g250640 vs. ExPASy Swiss-Prot
Match: Q758S3 (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 6   VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNPQLEVVRELIRGQHPHLKAFYKN 65
           ++  +K+ + YC+WGGSS+G+R F+ S +L  + +K PQ++    + +  HP LKA Y N
Sbjct: 20  IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQ-FEVVAKAGHPVLKAEYIN 79

Query: 66  NNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDAAMWVP 123
              + +CVRNL+ + + L    LR + G ++     RH  KN +V    ++   +W P
Sbjct: 80  GLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWSP 131

[Close]

BLAST of Csor.00g250640 vs. ExPASy Swiss-Prot
Match: Q06090 (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10
Identity = 38/114 (33.33%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 6   VWQLQKLIVSYCDWGGSSRGIRAFMDS-QLPDFKKKNP--QLEVVRELIRGQHPHLKAFY 65
           V+  +K+ + +C+WGGSS G+R F+ S +L  + ++ P  Q EV+R   +  HP L+A Y
Sbjct: 20  VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEVMR---KSGHPLLRAEY 79

Query: 66  KNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRH---VTKNPSVQGTW 114
            N  ++V+CVRNL+ + +      L+++ G  +++ +T++    + N SV+G W
Sbjct: 80  TNGREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIW 129

[Close]

BLAST of Csor.00g250640 vs. ExPASy Swiss-Prot
Match: Q99N89 (39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-08
Identity = 39/119 (32.77%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 4   RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYK 63
           R V QLQ+L +S      SSRG R F++ ++ DF ++NP + V         P + A Y 
Sbjct: 21  RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYL 80

Query: 64  NNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDAAMWVP 123
           N   R   V +   EEI     +L +  G  VI+++    T NPS+QG W       +P
Sbjct: 81  NGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWTPSPTNGLP 139

[Close]

BLAST of Csor.00g250640 vs. ExPASy Swiss-Prot
Match: Q8N983 (39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-08
Identity = 37/110 (33.64%), Postives = 54/110 (49.09%), Query Frame = 0


Query: 4   RGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKAFYK 63
           R V QLQ+L  S    G SSRG R F++ ++ DF ++NP + +         P + A Y 
Sbjct: 21  RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL 80

Query: 64  NNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTW 114
           N   R   +     EEI     +L +  G  VI+++    T NPS+QG W
Sbjct: 81  NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130

[Close]

BLAST of Csor.00g250640 vs. NCBI nr
Match: KAG6597670.1 (hypothetical protein SDJN03_10850, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402 bits (1034), Expect = 1.16e-141
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDAAMW 120
           FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDAAMW
Sbjct: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTDAAMW 120

Query: 121 VPGVLESSIAATPGTLSHPTGNSFIGAESNCVVVQAKLLELVGSGLDVDGMGGHSRLPRT 180
           VPGVLESSIAATPGTLSHPTGNSFIGAESNCVVVQAKLLELVGSGLDVDGMGGHSRLPRT
Sbjct: 121 VPGVLESSIAATPGTLSHPTGNSFIGAESNCVVVQAKLLELVGSGLDVDGMGGHSRLPRT 180

Query: 181 GGKFTMTKLCKRRNDV 196
           GGKFTMTKLCKRRNDV
Sbjct: 181 GGKFTMTKLCKRRNDV 196

[Close]

BLAST of Csor.00g250640 vs. NCBI nr
Match: KAG7029113.1 (mrpl51 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241 bits (616), Expect = 4.20e-79
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD
Sbjct: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116

[Close]

BLAST of Csor.00g250640 vs. NCBI nr
Match: XP_022932626.1 (54S ribosomal protein L51, mitochondrial [Cucurbita moschata])

HSP 1 Score: 240 bits (612), Expect = 1.71e-78
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD
Sbjct: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116

[Close]

BLAST of Csor.00g250640 vs. NCBI nr
Match: XP_022972093.1 (54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 238 bits (608), Expect = 6.94e-78
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD
Sbjct: 61  FYKNNNQRVVCVRNLDVEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116

[Close]

BLAST of Csor.00g250640 vs. NCBI nr
Match: XP_023538941.1 (54S ribosomal protein L51, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236 bits (602), Expect = 5.69e-77
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDW GSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWSGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD
Sbjct: 61  FYKNNNQRVVCVRNLDVEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116

[Close]

BLAST of Csor.00g250640 vs. ExPASy TrEMBL
Match: A0A6J1EWV2 (54S ribosomal protein L51, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111439127 PE=3 SV=1)

HSP 1 Score: 240 bits (612), Expect = 8.26e-79
Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD
Sbjct: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116

[Close]

BLAST of Csor.00g250640 vs. ExPASy TrEMBL
Match: A0A6J1I8W1 (54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111470732 PE=3 SV=1)

HSP 1 Score: 238 bits (608), Expect = 3.36e-78
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQL+VVRELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLKVVRELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYKNNNQRVVCVRNLD EEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD
Sbjct: 61  FYKNNNQRVVCVRNLDVEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116

[Close]

BLAST of Csor.00g250640 vs. ExPASy TrEMBL
Match: A0A6J1DVX7 (54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024881 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 5.88e-72
Identity = 106/116 (91.38%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLP FK+KNPQLEVV ELIRGQHPHLKA
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYKNNN+RVVCV+NLD EEI+LHA RLRNALGRKVIKL+TRHVTKNPSVQGTW TD
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTD 116

[Close]

BLAST of Csor.00g250640 vs. ExPASy TrEMBL
Match: A0A6J1IW90 (54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479166 PE=3 SV=1)

HSP 1 Score: 213 bits (542), Expect = 3.75e-68
Identity = 96/116 (82.76%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQL+KLIVSYCDWGGSSRGIRAFMDS+LP F++KNPQL++V ELIRGQHPHLK 
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKTD 116
           FYK+NN RV+CV+N+D E+IHLHATRLRNALGRKV+KL+TRHVTKNPS QGTW TD
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTD 116

[Close]

BLAST of Csor.00g250640 vs. ExPASy TrEMBL
Match: A0A1S3UNB7 (54S ribosomal protein L51, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106767232 PE=3 SV=1)

HSP 1 Score: 210 bits (535), Expect = 4.36e-67
Identity = 96/115 (83.48%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQL KL+VSYC+WGGSSRGIRAFM+S LP FK+KNPQLEVV ELIRGQHPHLKA
Sbjct: 1   MALRGVWQLNKLVVSYCNWGGSSRGIRAFMESHLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKT 115
           FYKN NQRV+CV+N+D E+IH+HATRLRNALGRKV+KL+TRHVTK+PSVQGTW T
Sbjct: 61  FYKNKNQRVICVKNMDPEDIHMHATRLRNALGRKVVKLRTRHVTKHPSVQGTWTT 115

[Close]

BLAST of Csor.00g250640 vs. TAIR 10
Match: AT3G59650.1 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-49
Identity = 87/115 (75.65%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  K+KNPQLEV+ EL RGQHP+LK 
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FYKNNNQRVVCVRNLDAEEIHLHATRLRNALGRKVIKLKTRHVTKNPSVQGTWKT 116
            Y+N N+RVVCV+N+D EE+ L+ATRLRN+LGRKV+KL+TRHVTK+PSVQGTW T
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTT 115

[Close]

BLAST of Csor.00g250640 vs. TAIR 10
Match: AT3G59650.2 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.9e-45
Identity = 87/142 (61.27%), Postives = 104/142 (73.24%), Query Frame = 0


Query: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPDFKKKNPQLEVVRELIRGQHPHLKA 60
           MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+S+LP  K+KNPQLEV+ EL RGQHP+LK 
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FYK---------------------------NNNQRVVCVRNLDAEEIHLHATRLRNALGR 116
            Y                            N N+RVVCV+N+D EE+ L+ATRLRN+LGR
Sbjct: 61  IYSMYISPLLNTILIQRLLILAISLAQFIGNRNERVVCVKNMDPEEVLLNATRLRNSLGR 120

The following BLAST results are available for this feature:

BLAST of Csor.00g250640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UUC8	4.4e-13	32.69	54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q758S3	2.2e-12	33.05	54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /...	[more]
Q06090	2.7e-10	33.33	54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q99N89	2.5e-08	32.77	39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1...	[more]
Q8N983	5.6e-08	33.64	39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 ...	[more]

BLAST of Csor.00g250640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597670.1	1.16e-141	100.00	hypothetical protein SDJN03_10850, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7029113.1	4.20e-79	100.00	mrpl51 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022932626.1	1.71e-78	99.14	54S ribosomal protein L51, mitochondrial [Cucurbita moschata]	[more]
XP_022972093.1	6.94e-78	98.28	54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]	[more]
XP_023538941.1	5.69e-77	97.41	54S ribosomal protein L51, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g250640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWV2	8.26e-79	99.14	54S ribosomal protein L51, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I8W1	3.36e-78	98.28	54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1DVX7	5.88e-72	91.38	54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1IW90	3.75e-68	82.76	54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A1S3UNB7	4.36e-67	83.48	54S ribosomal protein L51, mitochondrial OS=Vigna radiata var. radiata OX=3916 G...	[more]

BLAST of Csor.00g250640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59650.1	1.4e-49	75.65	mitochondrial ribosomal protein L51/S25/CI-B8 family protein	[more]
AT3G59650.2	5.9e-45	61.27	mitochondrial ribosomal protein L51/S25/CI-B8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 18..91 e-value: 2.1E-18 score: 77.1
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 26..76 e-value: 6.2E-10 score: 38.8
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..122 e-value: 4.8E-43 score: 148.5
IPR039927	39S ribosomal protein L43/54S ribosomal protein L51	PANTHER	PTHR21396	39S RIBOSOMAL PROTEIN L43	coord: 1..116
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 8..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g250640.m01	Csor.00g250640.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032543	mitochondrial translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome