Csor.00g250250 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g250250
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	GATA transcription factor 12-like
Location	Csor_Chr06: 11427941 .. 11428913 (+)
RNA-Seq Expression	Csor.00g250250
Synteny	Csor.00g250250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAACACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGTATGTCATTTTAAACTCCATTGCTTTGTTTTTTTTTTTGCCTTGTTGTTCTCATCACACCAATGTTGAGCTTCATTGAATTCAGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCCCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCGAGAAGGAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGCTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

mRNA sequence

ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAACACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCCCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCGAGAAGGAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGCTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

Coding sequence (CDS)

ATGGATTACCAGCCGAAAATGGTGTCGGTCAACAGCGAATACGAGCAACACGACTGTTCTAAACTCAAGTCCGAGCTTTCTTCCACTCTCGACGACGACCTCTGTTCACTCCAGATGACGACAATGGAAGTTGATGTAAACTTGGAGTGGCTGTCAGCATTTGTGGAAGAATGCTTATCAGCCAAAGGAAGCAGCCTCCCCCTCCCCCTCCCCCTCCCCCTCCCACCCCCACAGCTATCCACACACCTCAACAATCCTCCACCACCACCAAATTCACTCTCTCACCCCACACCATCTTCTTCCGACTCCCCGTTCTCCCACTTTTCTGCAGTCCCCAGCAAGGCGAGAAGGAAAAGAAGACAGGCGCCCGCCAACACGAGCATTCGCCCTCTCATTGGTCAACACCACCTCGATCAACTGAACCTGCTGCCGAGCAAACAGTCCTTACAGCTGACCTCTTCCTCTGCAGACACTCTTTTGCTGCAACAGACATATTGGTTGGCCGACAGTGAGCTCCTATTGCCGCATAAGGCTCGAGGAGGAGGAGAAGAAGAAAGGGAGAAGAAGGTGGACATGGATCAGAGAGACACAACAGTGAAGAAGAGTTTGGGGCTGCAGCAGAAACAGGGTGCAGGGAGTGGGAGGAGATGCAGCCATTGTCAGGCACAGAGGACTCCACAGTGGAGGGGTGGACCATTGGGACCCAAGACATTATGTAATGCATGTGGAGTTAGATACAAGAAGTCAGGAAGGTTGGTGCCAGAGTATAGACCAGCCAACAGCCCTACTTTTGTGAGTTTCTTGCATTCCAATTCACACAAAAGGGTTATGGAGATGAGAATGATCAATGCCTCTTCTTCTACTTCTACTGCCTTTTCCTCTTCTTAA

Protein sequence

MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS

Homology

[Close]

BLAST of Csor.00g250250 vs. ExPASy Swiss-Prot
Match: Q8LAU9 (GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 214 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 273
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 274 KRVMEMR 281
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]

BLAST of Csor.00g250250 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26
Identity = 95/237 (40.08%), Postives = 118/237 (49.79%), Query Frame = 0


Query: 48  LEWLSAFVEECLSAKGSSLPLPLPLPLPPPQLS----THLNNPPPPPNSLSHPTPSSSDS 107
           LEWLS FVEE  + +     L L   L  PQ +    THL  P P    L H      +S
Sbjct: 80  LEWLSNFVEESFAGEDQD-KLHLFSGLKNPQTTGSTLTHLIKPEP---ELDHQFIDIDES 139

Query: 108 PFSHFSAVPSKARRKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQ 167
                 AVP+KAR KR ++ A+T    L+     D+ N  P K                 
Sbjct: 140 NV----AVPAKARSKRSRSAASTWASRLLSLADSDETN--PKK----------------- 199

Query: 168 TYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQ 227
                        K R   E++    +D+D  +              +G GRRC HC  +
Sbjct: 200 -------------KQRRVKEQDFAGDMDVDCGE--------------SGGGRRCLHCATE 259

Query: 228 RTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 281
           +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 260 KTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVMARHSNSHRKVMELR 261

[Close]

BLAST of Csor.00g250250 vs. ExPASy Swiss-Prot
Match: O49743 (GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 211 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 270
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 271 NSHKRVMEMR 281
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]

BLAST of Csor.00g250250 vs. ExPASy Swiss-Prot
Match: P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25
Identity = 98/259 (37.84%), Postives = 130/259 (50.19%), Query Frame = 0


Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPLPLPPPQLSTHLNNPP 87
           ++   DLC   + + ++   LEWLS  V+E LS          P  +   +L +   + P
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLS----------PEDVHKLELISGFKSRP 124

Query: 88  PPPNSLSHP-TPSSSDSPFSHFSAVPSKARRKR-RQAPANTSIRPLIGQHHLDQ----LN 147
            P +    P  P+SS   F+   +VP+KAR KR R A  N + R L+ +   D       
Sbjct: 125 DPKSDTGSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGET 184

Query: 148 LLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKK 207
           +L S+Q   L+  ++  LL+            L  K    G   R+K V           
Sbjct: 185 ILSSQQ--HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVS---------- 244

Query: 208 SLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANS 267
                 + G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA S
Sbjct: 245 ----SPESGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAAS 283

Query: 268 PTFVSFLHSNSHKRVMEMR 281
           PTFV   HSNSH++VME+R
Sbjct: 305 PTFVLAKHSNSHRKVMELR 283

[Close]

BLAST of Csor.00g250250 vs. ExPASy Swiss-Prot
Match: O49741 (GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.5e-25
Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 212 GSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSN 271
           G  RRC+HC +++TPQWR GPLGPKTLCNACGVR+ KSGRLVPEYRPA+SPTFV   HSN
Sbjct: 176 GGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRF-KSGRLVPEYRPASSPTFVLTQHSN 235

Query: 272 SHKRVMEMR 281
           SH++VME+R
Sbjct: 236 SHRKVMELR 243

[Close]

BLAST of Csor.00g250250 vs. NCBI nr
Match: KAG6597708.1 (GATA transcription factor 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 577 bits (1486), Expect = 2.93e-207
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
           AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR
Sbjct: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG
Sbjct: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295

[Close]

BLAST of Csor.00g250250 vs. NCBI nr
Match: KAG7029155.1 (GATA transcription factor 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 566 bits (1458), Expect = 5.04e-203
Identity = 292/295 (98.98%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
           AKGSSLPLPLPLP  PPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKAR KRR
Sbjct: 61  AKGSSLPLPLPLP--PPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG
Sbjct: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 293

[Close]

BLAST of Csor.00g250250 vs. NCBI nr
Match: XP_022932754.1 (GATA transcription factor 12-like [Cucurbita moschata])

HSP 1 Score: 551 bits (1421), Expect = 2.04e-197
Identity = 287/295 (97.29%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSE EQ DCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
           AKGSSLPLPLP    PPQLSTHLNNPPPPPNSLS PTPSSSDSPFSHFSAVPSKAR KRR
Sbjct: 61  AKGSSLPLPLP----PPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG
Sbjct: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 291

[Close]

BLAST of Csor.00g250250 vs. NCBI nr
Match: XP_023540763.1 (GATA transcription factor 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550 bits (1416), Expect = 1.10e-196
Identity = 285/295 (96.61%), Postives = 286/295 (96.95%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQ DCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
           AKGSSLPLP      PPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKAR KRR
Sbjct: 61  AKGSSLPLP------PPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARSKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA+G
Sbjct: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAQG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GG EEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGGEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 289

[Close]

BLAST of Csor.00g250250 vs. NCBI nr
Match: XP_022972249.1 (GATA transcription factor 12-like [Cucurbita maxima])

HSP 1 Score: 535 bits (1377), Expect = 9.29e-191
Identity = 280/295 (94.92%), Postives = 282/295 (95.59%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQ DCSKLKSELSSTLDDDLCSLQMTTMEVD NLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDGNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
           AKGSSLPLP      PPQLSTHLNNPPPPPNSLSHP PSSSDSPFSHFSAVPSKAR KRR
Sbjct: 61  AKGSSLPLP------PPQLSTHLNNPPPPPNSLSHPIPSSSDSPFSHFSAVPSKARSKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSI PLIGQHHLDQLNLLP+KQSLQLTSSSAD LLLQQTYWLADSELLLPHKARG
Sbjct: 121 QAPANTSICPLIGQHHLDQLNLLPNKQSLQLTSSSADILLLQQTYWLADSELLLPHKARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GGE EREKKV+MDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGE-EREKKVEMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 288

[Close]

BLAST of Csor.00g250250 vs. ExPASy TrEMBL
Match: A0A6J1EXX1 (GATA transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111439211 PE=4 SV=1)

HSP 1 Score: 551 bits (1421), Expect = 9.89e-198
Identity = 287/295 (97.29%), Postives = 287/295 (97.29%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSE EQ DCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSENEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
           AKGSSLPLPLP    PPQLSTHLNNPPPPPNSLS PTPSSSDSPFSHFSAVPSKAR KRR
Sbjct: 61  AKGSSLPLPLP----PPQLSTHLNNPPPPPNSLSRPTPSSSDSPFSHFSAVPSKARSKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG
Sbjct: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 291

[Close]

BLAST of Csor.00g250250 vs. ExPASy TrEMBL
Match: A0A6J1IAY5 (GATA transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111470835 PE=4 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 4.50e-191
Identity = 280/295 (94.92%), Postives = 282/295 (95.59%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQPKMVSVNSEYEQ DCSKLKSELSSTLDDDLCSLQMTTMEVD NLEWLSAFVEECLS
Sbjct: 1   MDYQPKMVSVNSEYEQDDCSKLKSELSSTLDDDLCSLQMTTMEVDGNLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
           AKGSSLPLP      PPQLSTHLNNPPPPPNSLSHP PSSSDSPFSHFSAVPSKAR KRR
Sbjct: 61  AKGSSLPLP------PPQLSTHLNNPPPPPNSLSHPIPSSSDSPFSHFSAVPSKARSKRR 120

Query: 121 QAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARG 180
           QAPANTSI PLIGQHHLDQLNLLP+KQSLQLTSSSAD LLLQQTYWLADSELLLPHKARG
Sbjct: 121 QAPANTSICPLIGQHHLDQLNLLPNKQSLQLTSSSADILLLQQTYWLADSELLLPHKARG 180

Query: 181 GGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240
           GGE EREKKV+MDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN
Sbjct: 181 GGE-EREKKVEMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCN 240

Query: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 295
           ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS
Sbjct: 241 ACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTAFSSS 288

[Close]

BLAST of Csor.00g250250 vs. ExPASy TrEMBL
Match: A0A0A0LD86 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G843820 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 2.22e-129
Identity = 211/292 (72.26%), Postives = 237/292 (81.16%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQ DCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQQETASVNYKCEQDDCSNLEAEFSSTIDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
            KGS+LPLP     PP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KAR KRR
Sbjct: 61  TKGSTLPLP-----PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFAHFPAVPGKARSKRR 120

Query: 121 Q-APANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKAR 180
           +  P+  S+ PLI +  L QLNLL +K SLQLT+S+ D LLLQQTYWLADSELLLP KAR
Sbjct: 121 RRTPSKMSVLPLISRR-LRQLNLLQNKHSLQLTTST-DPLLLQQTYWLADSELLLPPKAR 180

Query: 181 GGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLC 240
           GG   EREK VDM Q +TTV+ S+  QQ+QGAGSGRRCSHCQAQRTPQWR GPLGPKTLC
Sbjct: 181 GG---EREKTVDMGQIETTVENSMKKQQQQGAGSGRRCSHCQAQRTPQWRSGPLGPKTLC 240

Query: 241 NACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTSTA 291
           NACGVRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST+
Sbjct: 241 NACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTSTS 282

[Close]

BLAST of Csor.00g250250 vs. ExPASy TrEMBL
Match: A0A5A7U7L1 (GATA transcription factor 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00120 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 2.82e-125
Identity = 212/292 (72.60%), Postives = 235/292 (80.48%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQ DCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQTETASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
            KGS+ PLP     PP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KAR KRR
Sbjct: 61  TKGSTHPLP-----PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRR 120

Query: 121 Q-APANT-SIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA 180
           +  P+N  S+ PLI +  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP +A
Sbjct: 121 RRTPSNKMSVLPLISRR-LRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPEA 180

Query: 181 RGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTL 240
           RGG   EREK VDM Q  TTV+KS+  QQ QGAGSGRRCSHCQAQRTPQWR GPLGPKTL
Sbjct: 181 RGG---EREKTVDMGQIKTTVEKSVKKQQ-QGAGSGRRCSHCQAQRTPQWRSGPLGPKTL 240

Query: 241 CNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTST 290
           CNACGVRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST
Sbjct: 241 CNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTST 281

[Close]

BLAST of Csor.00g250250 vs. ExPASy TrEMBL
Match: A0A1S3CNM0 (GATA transcription factor 12-like OS=Cucumis melo OX=3656 GN=LOC103502974 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 2.82e-125
Identity = 212/292 (72.60%), Postives = 235/292 (80.48%), Query Frame = 0


Query: 1   MDYQPKMVSVNSEYEQHDCSKLKSELSSTLDDDLCSLQMTTMEVDVNLEWLSAFVEECLS 60
           MDYQ +  SVN + EQ DCS L++E SST+DD L S Q  TM+VDV+LEWLSAFVEECLS
Sbjct: 1   MDYQTETASVNYKCEQDDCSNLEAEFSSTVDDILYSSQAMTMDVDVSLEWLSAFVEECLS 60

Query: 61  AKGSSLPLPLPLPLPPPQLSTHLNNPPPPPNSLSHPTPSSSDSPFSHFSAVPSKARRKRR 120
            KGS+ PLP     PP QLST LNNPP  P+SLS   P+SS+S F+HF AVP KAR KRR
Sbjct: 61  TKGSTHPLP-----PPSQLSTQLNNPPTKPSSLSQLVPTSSNSQFTHFPAVPGKARSKRR 120

Query: 121 Q-APANT-SIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKA 180
           +  P+N  S+ PLI +  L QLNLL +K SLQLTSS+ D LLLQQTYWLADSELLLP +A
Sbjct: 121 RRTPSNKMSVLPLISRR-LRQLNLLQNKHSLQLTSST-DPLLLQQTYWLADSELLLPPEA 180

Query: 181 RGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTL 240
           RGG   EREK VDM Q  TTV+KS+  QQ QGAGSGRRCSHCQAQRTPQWR GPLGPKTL
Sbjct: 181 RGG---EREKTVDMGQIKTTVEKSVKKQQ-QGAGSGRRCSHCQAQRTPQWRSGPLGPKTL 240

Query: 241 CNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMRMINASSSTST 290
           CNACGVRYKKSGRL+PEYRPANSPTFVS LHSNSHKRVMEMRM+NASSSTST
Sbjct: 241 CNACGVRYKKSGRLLPEYRPANSPTFVSLLHSNSHKRVMEMRMMNASSSTST 281

[Close]

BLAST of Csor.00g250250 vs. TAIR 10
Match: AT3G24050.1 (GATA transcription factor 1 )

HSP 1 Score: 120.2 bits (300), Expect = 2.9e-27
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 214 GRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSH 273
           GR+C HC A++TPQWR GP GPKTLCNACGVRY KSGRLVPEYRPANSPTF + LHSNSH
Sbjct: 193 GRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRY-KSGRLVPEYRPANSPTFTAELHSNSH 252

Query: 274 KRVMEMR 281
           ++++EMR
Sbjct: 253 RKIVEMR 258

[Close]

BLAST of Csor.00g250250 vs. TAIR 10
Match: AT4G32890.1 (GATA transcription factor 9 )

HSP 1 Score: 120.2 bits (300), Expect = 2.9e-27
Identity = 95/237 (40.08%), Postives = 118/237 (49.79%), Query Frame = 0


Query: 48  LEWLSAFVEECLSAKGSSLPLPLPLPLPPPQLS----THLNNPPPPPNSLSHPTPSSSDS 107
           LEWLS FVEE  + +     L L   L  PQ +    THL  P P    L H      +S
Sbjct: 80  LEWLSNFVEESFAGEDQD-KLHLFSGLKNPQTTGSTLTHLIKPEP---ELDHQFIDIDES 139

Query: 108 PFSHFSAVPSKARRKRRQAPANTSIRPLIGQHHLDQLNLLPSKQSLQLTSSSADTLLLQQ 167
                 AVP+KAR KR ++ A+T    L+     D+ N  P K                 
Sbjct: 140 NV----AVPAKARSKRSRSAASTWASRLLSLADSDETN--PKK----------------- 199

Query: 168 TYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKKSLGLQQKQGAGSGRRCSHCQAQ 227
                        K R   E++    +D+D  +              +G GRRC HC  +
Sbjct: 200 -------------KQRRVKEQDFAGDMDVDCGE--------------SGGGRRCLHCATE 259

Query: 228 RTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSNSHKRVMEMR 281
           +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HSNSH++VME+R
Sbjct: 260 KTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVMARHSNSHRKVMELR 261

[Close]

BLAST of Csor.00g250250 vs. TAIR 10
Match: AT3G60530.1 (GATA transcription factor 4 )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 53/70 (75.71%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 211 AGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHS 270
           A   RRC+HC +++TPQWR GPLGPKTLCNACGVRY KSGRLVPEYRPA+SPTFV   HS
Sbjct: 154 ADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRY-KSGRLVPEYRPASSPTFVLTQHS 213

Query: 271 NSHKRVMEMR 281
           NSH++VME+R
Sbjct: 214 NSHRKVMELR 222

[Close]

BLAST of Csor.00g250250 vs. TAIR 10
Match: AT2G45050.1 (GATA transcription factor 2 )

HSP 1 Score: 116.7 bits (291), Expect = 3.2e-26
Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 212 GSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANSPTFVSFLHSN 271
           G  RRC+HC +++TPQWR GPLGPKTLCNACGVR+ KSGRLVPEYRPA+SPTFV   HSN
Sbjct: 176 GGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRF-KSGRLVPEYRPASSPTFVLTQHSN 235

Query: 272 SHKRVMEMR 281
           SH++VME+R
Sbjct: 236 SHRKVMELR 243

[Close]

BLAST of Csor.00g250250 vs. TAIR 10
Match: AT5G25830.1 (GATA transcription factor 12 )

HSP 1 Score: 116.7 bits (291), Expect = 3.2e-26
Identity = 98/259 (37.84%), Postives = 130/259 (50.19%), Query Frame = 0


Query: 28  STLDDDLCSLQMTTMEVDVNLEWLSAFVEECLSAKGSSLPLPLPLPLPPPQLSTHLNNPP 87
           ++   DLC   + + ++   LEWLS  V+E LS          P  +   +L +   + P
Sbjct: 65  TSFSGDLC---IPSDDLADELEWLSNIVDESLS----------PEDVHKLELISGFKSRP 124

Query: 88  PPPNSLSHP-TPSSSDSPFSHFSAVPSKARRKR-RQAPANTSIRPLIGQHHLDQ----LN 147
            P +    P  P+SS   F+   +VP+KAR KR R A  N + R L+ +   D       
Sbjct: 125 DPKSDTGSPENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGET 184

Query: 148 LLPSKQSLQLTSSSADTLLLQQTYWLADSELLLPHKARGGGEEEREKKVDMDQRDTTVKK 207
           +L S+Q   L+  ++  LL+            L  K    G   R+K V           
Sbjct: 185 ILSSQQ--HLSPPTSPPLLMAP----------LGKKQAVDGGHRRKKDVS---------- 244

Query: 208 SLGLQQKQGAGSGRRCSHCQAQRTPQWRGGPLGPKTLCNACGVRYKKSGRLVPEYRPANS 267
                 + G    RRC HC   +TPQWR GP+GPKTLCNACGVRY KSGRLVPEYRPA S
Sbjct: 245 ----SPESGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRY-KSGRLVPEYRPAAS 283

Query: 268 PTFVSFLHSNSHKRVMEMR 281
           PTFV   HSNSH++VME+R
Sbjct: 305 PTFVLAKHSNSHRKVMELR 283

The following BLAST results are available for this feature:

BLAST of Csor.00g250250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAU9	4.0e-26	77.61	GATA transcription factor 1 OS=Arabidopsis thaliana OX=3702 GN=GATA1 PE=2 SV=2	[more]
O82632	4.0e-26	40.08	GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1	[more]
O49743	1.5e-25	75.71	GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1	[more]
P69781	4.5e-25	37.84	GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1	[more]
O49741	4.5e-25	75.36	GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1	[more]

BLAST of Csor.00g250250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597708.1	2.93e-207	100.00	GATA transcription factor 9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029155.1	5.04e-203	98.98	GATA transcription factor 9 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022932754.1	2.04e-197	97.29	GATA transcription factor 12-like [Cucurbita moschata]	[more]
XP_023540763.1	1.10e-196	96.61	GATA transcription factor 12-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972249.1	9.29e-191	94.92	GATA transcription factor 12-like [Cucurbita maxima]	[more]

BLAST of Csor.00g250250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXX1	9.89e-198	97.29	GATA transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111439211 ...	[more]
A0A6J1IAY5	4.50e-191	94.92	GATA transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111470835 PE...	[more]
A0A0A0LD86	2.22e-129	72.26	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G843820 P...	[more]
A0A5A7U7L1	2.82e-125	72.60	GATA transcription factor 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CNM0	2.82e-125	72.60	GATA transcription factor 12-like OS=Cucumis melo OX=3656 GN=LOC103502974 PE=4 S...	[more]

BLAST of Csor.00g250250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24050.1	2.9e-27	77.61	GATA transcription factor 1	[more]
AT4G32890.1	2.9e-27	40.08	GATA transcription factor 9	[more]
AT3G60530.1	1.1e-26	75.71	GATA transcription factor 4	[more]
AT2G45050.1	3.2e-26	75.36	GATA transcription factor 2	[more]
AT5G25830.1	3.2e-26	37.84	GATA transcription factor 12	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 211..262 e-value: 1.2E-17 score: 74.6
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 217..251 e-value: 1.4E-15 score: 56.6
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 217..242
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 211..254 score: 12.927383
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 216..264 e-value: 1.74966E-13 score: 62.005
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 212..280 e-value: 1.8E-16 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..198
None	No IPR available	PANTHER	PTHR45658:SF85	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 7..287
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 7..287
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 213..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g250250.m01	Csor.00g250250.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding