Csor.00g246930 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCTCCACAAGTTTCCCAGTCCGACATTGATTTGGAGCAAGGGGATCATCGGCGGTCTGTTAGTGGTAGTGAGTTGAGCGCCGATTGTAGCGTTTATTTCTCTGACGCCGATGAGGGTTCGTGTTATTCCCAGTTTTATTCCACCAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGGGGTTGGGGTGGTTGTTTCGGATTCCCGGCGGCTTTCATCGGCTTCGGATCGTTCCGTCGAGGTTGAAAATGAGAATGGGATTACTGAAATTAAGGTGCATTTAGGTAAGGTTGAGAGGGATTGCAGGATTTGTCATCTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCTTGCAAGGATGATCTGGCTGCGGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATCAAAGGCAATAAGTGAGTTACATCCCTGTTTTTATAAGCAAGTTTTCATGTTTTTTGTCCAGGAATTCTGATCATTCTTCACTCATGCTATGTCATGTCATGCTTCATAGTTCTTTGAGTTCATGTTTTCAGATTATGTTCTTGCTGCTGTTCTTGTGATAAGCATCTTCTGTGATATTCTGGTGAATTTGTTACTTAAACCTTACCATTTTGATGCTTACTTAGAGGGAAAGCTTAGAGACACAAAAGGAAATAAGAGTAAAACATAAGAAAGACGTTTATTTTATCTCCAAGCAAGTTACACTGATTATTCCTTCTTCCTTCTCGCTTTTCTGATGCCTTATGAATCTCTGTGAGCTCTTTCAGATCCTTACTCTCATGAGCTAATATCAAAAGATATGCATTTAGGGAGAGAGGAATAAGTGTCAGCGAGGACACCGAATCTCGAAAGAGGGTGGATTGTGAGATCCCACATAAGGGCCTAGCAAACACGTTTTTAAAACCTCGAGGGAAAGTTCAAAGAGGAGAATATCTATTAGTGGTGAGTTTGGGTTCTTACACAAGATGAACATAAACAACGATGGTTGAAGGTGAATTGGGGGACTTGATGGTTTGGCATTTGCTGTCTTCATGATAGGTTTACACCTTGTGATTGTTGTGTGATCGATCTTTACTTTCTGTTTGATGCTCGAAAATGGACCGAGGCATTTGCATTGTTCTTTTGGCTACTTTGTTTATTCATAATCTTCTTAAATCTTATTAGGACGTGTGAGATTTGTCATTCCGTTGCACGAAACATTCTGGGACCAAATGAAGTTGAGTCAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCAACAACTGCAGTTGCTGCTGCATCAATTCCCTCATCAGATAGCCCAAGCTTCTGGCGTGGCCATCGGTTTCTGAACTTTCTACTTGCTTGTATGGTTTTTGCATTTGTTATATCTTGGCTCTTTCACTTCAACGTGCCCTCATAA ATGGCGCCTCCACAAGTTTCCCAGTCCGACATTGATTTGGAGCAAGGGGATCATCGGCGGTCTGTTAGTGGTAGTGAGTTGAGCGCCGATTGTAGCGTTTATTTCTCTGACGCCGATGAGGGTTCGTGTTATTCCCAGTTTTATTCCACCAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGGGGTTGGGGTGGTTGTTTCGGATTCCCGGCGGCTTTCATCGGCTTCGGATCGTTCCGTCGAGGTTGAAAATGAGAATGGGATTACTGAAATTAAGGTGCATTTAGGTAAGGTTGAGAGGGATTGCAGGATTTGTCATCTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCTTGCAAGGATGATCTGGCTGCGGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATCAAAGGCAATAAGACGTGTGAGATTTGTCATTCCGTTGCACGAAACATTCTGGGACCAAATGAAGTTGAGTCAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCAACAACTGCAGTTGCTGCTGCATCAATTCCCTCATCAGATAGCCCAAGCTTCTGGCGTGGCCATCGGTTTCTGAACTTTCTACTTGCTTGTATGGTTTTTGCATTTGTTATATCTTGGCTCTTTCACTTCAACGTGCCCTCATAA ATGGCGCCTCCACAAGTTTCCCAGTCCGACATTGATTTGGAGCAAGGGGATCATCGGCGGTCTGTTAGTGGTAGTGAGTTGAGCGCCGATTGTAGCGTTTATTTCTCTGACGCCGATGAGGGTTCGTGTTATTCCCAGTTTTATTCCACCAACGGTGGTTCTTACGATGAGTATAGGTTTGCTTTCGTTTCTCAGCCGGGGGTTGGGGTGGTTGTTTCGGATTCCCGGCGGCTTTCATCGGCTTCGGATCGTTCCGTCGAGGTTGAAAATGAGAATGGGATTACTGAAATTAAGGTGCATTTAGGTAAGGTTGAGAGGGATTGCAGGATTTGTCATCTGGGTTTGGAGAGTAATAGCCAAGAATCTGGAATCCCAATCGAATTGGGTTGTTCTTGCAAGGATGATCTGGCTGCGGCTCACAAGCATTGTGCTGAAACCTGGTTCAAAATCAAAGGCAATAAGACGTGTGAGATTTGTCATTCCGTTGCACGAAACATTCTGGGACCAAATGAAGTTGAGTCAACAGAGCAGTCTAATGAATCCAACAACGCCTCCTCAACAACTGCAGTTGCTGCTGCATCAATTCCCTCATCAGATAGCCCAAGCTTCTGGCGTGGCCATCGGTTTCTGAACTTTCTACTTGCTTGTATGGTTTTTGCATTTGTTATATCTTGGCTCTTTCACTTCAACGTGCCCTCATAA MAPPQVSQSDIDLEQGDHRRSVSGSELSADCSVYFSDADEGSCYSQFYSTNGGSYDEYRFAFVSQPGVGVVVSDSRRLSSASDRSVEVENENGITEIKVHLGKVERDCRICHLGLESNSQESGIPIELGCSCKDDLAAAHKHCAETWFKIKGNKTCEICHSVARNILGPNEVESTEQSNESNNASSTTAVAAASIPSSDSPSFWRGHRFLNFLLACMVFAFVISWLFHFNVPS Homology
BLAST of Csor.00g246930 vs. NCBI nr
Match: KAG6596373.1 (hypothetical protein SDJN03_09553, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027922.1 hypothetical protein SDJN02_09101 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 468 bits (1205), Expect = 1.67e-166 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Csor.00g246930 vs. NCBI nr
Match: XP_023538705.1 (uncharacterized protein LOC111799566 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 462 bits (1189), Expect = 4.44e-164 Identity = 232/233 (99.57%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of Csor.00g246930 vs. NCBI nr
Match: XP_022941830.1 (uncharacterized protein LOC111447072 [Cucurbita moschata]) HSP 1 Score: 461 bits (1186), Expect = 1.27e-163 Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of Csor.00g246930 vs. NCBI nr
Match: XP_022971335.1 (uncharacterized protein LOC111470088 [Cucurbita maxima]) HSP 1 Score: 457 bits (1177), Expect = 3.00e-162 Identity = 230/233 (98.71%), Postives = 231/233 (99.14%), Query Frame = 0
BLAST of Csor.00g246930 vs. NCBI nr
Match: XP_038904640.1 (uncharacterized protein LOC120090971 [Benincasa hispida]) HSP 1 Score: 428 bits (1100), Expect = 1.59e-150 Identity = 216/233 (92.70%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of Csor.00g246930 vs. ExPASy TrEMBL
Match: A0A6J1FUW7 (uncharacterized protein LOC111447072 OS=Cucurbita moschata OX=3662 GN=LOC111447072 PE=4 SV=1) HSP 1 Score: 461 bits (1186), Expect = 6.17e-164 Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of Csor.00g246930 vs. ExPASy TrEMBL
Match: A0A6J1I5G1 (uncharacterized protein LOC111470088 OS=Cucurbita maxima OX=3661 GN=LOC111470088 PE=4 SV=1) HSP 1 Score: 457 bits (1177), Expect = 1.45e-162 Identity = 230/233 (98.71%), Postives = 231/233 (99.14%), Query Frame = 0
BLAST of Csor.00g246930 vs. ExPASy TrEMBL
Match: A0A1S3B5A7 (uncharacterized protein LOC103486339 OS=Cucumis melo OX=3656 GN=LOC103486339 PE=4 SV=1) HSP 1 Score: 426 bits (1094), Expect = 6.31e-150 Identity = 215/233 (92.27%), Postives = 221/233 (94.85%), Query Frame = 0
BLAST of Csor.00g246930 vs. ExPASy TrEMBL
Match: A0A0A0LAC9 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733180 PE=4 SV=1) HSP 1 Score: 425 bits (1092), Expect = 1.27e-149 Identity = 215/233 (92.27%), Postives = 221/233 (94.85%), Query Frame = 0
BLAST of Csor.00g246930 vs. ExPASy TrEMBL
Match: A0A6J1CWG7 (uncharacterized protein LOC111015024 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015024 PE=4 SV=1) HSP 1 Score: 422 bits (1084), Expect = 2.11e-148 Identity = 212/233 (90.99%), Postives = 222/233 (95.28%), Query Frame = 0
BLAST of Csor.00g246930 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 210.3 bits (534), Expect = 1.7e-54 Identity = 103/163 (63.19%), Postives = 124/163 (76.07%), Query Frame = 0
BLAST of Csor.00g246930 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45 Identity = 115/232 (49.57%), Postives = 140/232 (60.34%), Query Frame = 0
BLAST of Csor.00g246930 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 155.6 bits (392), Expect = 4.9e-38 Identity = 101/228 (44.30%), Postives = 123/228 (53.95%), Query Frame = 0
BLAST of Csor.00g246930 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 128.6 bits (322), Expect = 6.4e-30 Identity = 84/220 (38.18%), Postives = 105/220 (47.73%), Query Frame = 0
BLAST of Csor.00g246930 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18 Identity = 59/146 (40.41%), Postives = 72/146 (49.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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