Csor.00g245460 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATTGGGGATCGCCCAATGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGTTGGGGTTACGGTTCGGGTTCGGTCGCTCCCCGACTGGGTTCGGGAAGGGTTATGGATATGGATTTGGTTCGGGGTCGGGTTCGGGATCTGGATATGGGTATGGAAGCGGAGGTGGTGGGGCTCATGGTGGTGGATATGGCTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCGGCCGTTACGAAGGACAAAGCAGGCATGGGTAGAGAAAATGCATGTGGAGGGATAA ATGTATTGGGGATCGCCCAATGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGTTGGGGTTACGGTTCGGGTTCGGTCGCTCCCCGACTGGGTTCGGGAAGGGTTATGGATATGGATTTGGTTCGGGGTCGGGTTCGGGATCTGGATATGGGTATGGAAGCGGAGGTGGTGGGGCTCATGGTGGTGGATATGGCTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCGGCCGTTACGAAGGACAAAGCAGGCATGGGTAGAGAAAATGCATGTGGAGGGATAA ATGTATTGGGGATCGCCCAATGGAGGTGGGAATCCCACTGGGGGCTATGGCTCTGCCCATGGTCCTAATTGGGACTATAATTGGGGCTGGGGTTCGAGCCCTGGGAGTGGTTGGGGTTACGGTTCGGGTTCGGTCGCTCCCCGACTGGGTTCGGGAAGGGTTATGGATATGGATTTGGTTCGGGGTCGGGTTCGGGATCTGGATATGGGTATGGAAGCGGAGGTGGTGGGGCTCATGGTGGTGGATATGGCTCCGGAAGTGGCTACGGTAACTCTGGCGACAGTGGCGATGGTGGCGGGTACGGTGGTTCGAGTGGCGGCGGATATGGCAATTCGAGTGGCGGCGAGTATCCTCCGTCGGCCGTTACGAAGGACAAAGCAGGCATGGGTAGAGAAAATGCATGTGGAGGGATAA MYWGSPNGGGNPTGGYGSAHGPNWDYNWGWGSSPGSGWGYGSGSVAPRLGSGRVMDMDLVRGRVRDLDMGMEAEVVGLMVVDMAPEVATVTLATVAMVAGTVVRVAADMAIRVAASILRRPLRRTKQAWVEKMHVEG Homology
BLAST of Csor.00g245460 vs. NCBI nr
Match: KAG6576836.1 (hypothetical protein SDJN03_24410, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261 bits (666), Expect = 1.75e-87 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Csor.00g245460 vs. NCBI nr
Match: XP_022984407.1 (glycine-rich cell wall structural protein 2-like [Cucurbita maxima]) HSP 1 Score: 101 bits (251), Expect = 4.97e-24 Identity = 46/53 (86.79%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Csor.00g245460 vs. NCBI nr
Match: XP_023553046.1 (keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 100 bits (250), Expect = 7.03e-24 Identity = 46/53 (86.79%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Csor.00g245460 vs. NCBI nr
Match: XP_022922583.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG7014856.1 hypothetical protein SDJN02_22486, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100 bits (250), Expect = 7.03e-24 Identity = 46/53 (86.79%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Csor.00g245460 vs. NCBI nr
Match: XP_038899364.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida]) HSP 1 Score: 89.7 bits (221), Expect = 1.63e-19 Identity = 44/56 (78.57%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of Csor.00g245460 vs. ExPASy TrEMBL
Match: A0A6J1J236 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482714 PE=4 SV=1) HSP 1 Score: 101 bits (251), Expect = 2.41e-24 Identity = 46/53 (86.79%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Csor.00g245460 vs. ExPASy TrEMBL
Match: A0A6J1E737 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430548 PE=4 SV=1) HSP 1 Score: 100 bits (250), Expect = 3.40e-24 Identity = 46/53 (86.79%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Csor.00g245460 vs. ExPASy TrEMBL
Match: A0A6J1FQS0 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447601 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.64e-19 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of Csor.00g245460 vs. ExPASy TrEMBL
Match: A0A6J1J8K0 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482719 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.74e-18 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of Csor.00g245460 vs. ExPASy TrEMBL
Match: A0A5A7TRC6 (Glycine-rich cell wall structural protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00320 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.35e-17 Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of Csor.00g245460 vs. TAIR 10
Match: AT5G61660.1 (glycine-rich protein ) HSP 1 Score: 61.2 bits (147), Expect = 7.3e-10 Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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