Csor.00g245060 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTAGCATCCCGACCGGAGTGACATTGCCTCCACTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA ATGGCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTAGCATCCCGACCGGAGTGACATTGCCTCCACTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA ATGGCCTCTTCCAACTACTTCATCATGGCTTTCATGGCTACTTTGGTGTTTTCAGCCCTCGACACCGGCCGAGCCGCTCGTCGTCTCCTTCAAACCGCTCAGCCGAGCGTGCCAGGGTTGCCCTCGTTGCCGCCTCTACCGCCCTTCCCGACGGTACCGGGAATGCCCTCTATTCCTAATCTCCCACAGCCTACGTTGCCAACTACTCAACCTTCTCTCCCTAAGATGCCTCCTCTTCCTAGCTTCCCCGGTAGCATCCCGACCGGAGTGACATTGCCTCCACTCCCGACTCTACCGTCCTTCCCAACGACTTTCCCGTCGATCCCTTTCCTCACACCGCCCCCGGCCGCTACCTCTTCACCTTGA MASSNYFIMAFMATLVFSALDTGRAARRLLQTAQPSVPGLPSLPPLPPFPTVPGMPSIPNLPQPTLPTTQPSLPKMPPLPSFPGSIPTGVTLPPLPTLPSFPTTFPSIPFLTPPPAATSSP Homology
BLAST of Csor.00g245060 vs. ExPASy Swiss-Prot
Match: P9WJD2 (ESX-1 secretion-associated protein EspE OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=espE PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.8e-04 Identity = 41/96 (42.71%), Postives = 44/96 (45.83%), Query Frame = 0
BLAST of Csor.00g245060 vs. ExPASy Swiss-Prot
Match: P9WJD3 (ESX-1 secretion-associated protein EspE OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=espE PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.8e-04 Identity = 41/96 (42.71%), Postives = 44/96 (45.83%), Query Frame = 0
BLAST of Csor.00g245060 vs. NCBI nr
Match: KAG6576876.1 (IgA FC receptor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 223 bits (569), Expect = 3.33e-73 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Csor.00g245060 vs. NCBI nr
Match: XP_022985116.1 (uncharacterized protein LOC111483197 [Cucurbita maxima]) HSP 1 Score: 221 bits (563), Expect = 2.74e-72 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Csor.00g245060 vs. NCBI nr
Match: XP_023552840.1 (uncharacterized protein LOC111810366 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207 bits (527), Expect = 6.53e-67 Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of Csor.00g245060 vs. NCBI nr
Match: XP_022922560.1 (uncharacterized protein LOC111430528 [Cucurbita moschata]) HSP 1 Score: 205 bits (522), Expect = 3.78e-66 Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of Csor.00g245060 vs. NCBI nr
Match: XP_011654355.1 (uncharacterized protein LOC105435357 [Cucumis sativus]) HSP 1 Score: 162 bits (410), Expect = 7.37e-49 Identity = 96/129 (74.42%), Postives = 104/129 (80.62%), Query Frame = 0
BLAST of Csor.00g245060 vs. ExPASy TrEMBL
Match: A0A6J1J782 (uncharacterized protein LOC111483197 OS=Cucurbita maxima OX=3661 GN=LOC111483197 PE=4 SV=1) HSP 1 Score: 221 bits (563), Expect = 1.33e-72 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Csor.00g245060 vs. ExPASy TrEMBL
Match: A0A6J1E948 (uncharacterized protein LOC111430528 OS=Cucurbita moschata OX=3662 GN=LOC111430528 PE=4 SV=1) HSP 1 Score: 205 bits (522), Expect = 1.83e-66 Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of Csor.00g245060 vs. ExPASy TrEMBL
Match: A0A0A0KWI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182290 PE=4 SV=1) HSP 1 Score: 162 bits (410), Expect = 3.57e-49 Identity = 96/129 (74.42%), Postives = 104/129 (80.62%), Query Frame = 0
BLAST of Csor.00g245060 vs. ExPASy TrEMBL
Match: A0A5A7TLS8 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00030 PE=4 SV=1) HSP 1 Score: 150 bits (378), Expect = 3.00e-44 Identity = 95/133 (71.43%), Postives = 101/133 (75.94%), Query Frame = 0
BLAST of Csor.00g245060 vs. ExPASy TrEMBL
Match: A0A5D3E045 (Proline-rich receptor-like protein kinase PERK2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00030 PE=4 SV=1) HSP 1 Score: 147 bits (372), Expect = 2.45e-43 Identity = 94/133 (70.68%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of Csor.00g245060 vs. TAIR 10
Match: AT4G38080.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06 Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 0
BLAST of Csor.00g245060 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Csor.00g245060 vs. TAIR 10
Match: AT2G34870.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.4e-04 Identity = 47/126 (37.30%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of Csor.00g245060 vs. TAIR 10
Match: AT2G22510.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.4e-04 Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 0
BLAST of Csor.00g245060 vs. TAIR 10
Match: AT1G44224.1 (ECA1 gametogenesis related family protein ) HSP 1 Score: 41.6 bits (96), Expect = 5.3e-04 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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