Csor.00g233670 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g233670
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 13671271 .. 13672009 (+)
RNA-Seq ExpressionCsor.00g233670
SyntenyCsor.00g233670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTTCCTGTTGTGTAAGTATTTGATACTGTTCTGGCAATTGTTGTTTCAATGCAATCATGGGCAAGCTGGTTTTAGTTTCAATGTTCTTGCAAAAATAATGAAATTCAATACTTTTTTCAGTGACGACGGGATCGATCTGAATGGAGGCTATACGCCATCGAGGGATCAAGGTACGATTTATGATCAATGAACACTAACCACTTTCCTGCCTGTCATGTTGTAGTTAGTTTTACATGATGTCGTGTACGTGAAACACTTATCTAAACGCTCTGCATCGATCGCAGTATGTTGCCCAGGCAAGTACTCCACAGGGGTAGCAGTATGCTCAAGTTGCTTCTCTTTCAGTCATGCCATTTGCAAAATGAACCAATGTGAATACACACGCCCGACATCTCAGCTGCAAGACTGGATACCGAAGTCGAATCAGCGTTCCATTTTAGTGCCCATTCTACCATATAACGATGCAGCTGGTCATTTCGATATAAACACGGGAACAAACAAGGCAACATCAGTAATCACGGGGTATATTAAAAGGTTGGCTGGATTTCGAACCCGAATCAGCTTTACTGGTTTCACGAGGTCCATGAATGGCAAATTGTGGAATGAAAAGCTGTTTCCATTAACCAACCCTTTTTTATTGCTAAGCTGCTCCAGTGAAAATTGTGTCCGGATGATCAATCGTCCAACCAATTCTTGGATCTTAATTCTTTGGTGCTTCAGTGTAATAGCCTAA

mRNA sequence

ATGATCTTTCCTGTTGTTGACGACGGGATCGATCTGAATGGAGGCTATACGCCATCGAGGGATCAAGTATGTTGCCCAGGCAAGTACTCCACAGGGGTAGCAGTATGCTCAAGTTGCTTCTCTTTCAGTCATGCCATTTGCAAAATGAACCAATGTGAATACACACGCCCGACATCTCAGCTGCAAGACTGGATACCGAAGTCGAATCAGCGTTCCATTTTAGTGCCCATTCTACCATATAACGATGCAGCTGGTCATTTCGATATAAACACGGGAACAAACAAGGCAACATCAGTAATCACGGGGTATATTAAAAGGTTGGCTGGATTTCGAACCCGAATCAGCTTTACTGGTTTCACGAGGTCCATGAATGGCAAATTGTGGAATGAAAAGCTGTTTCCATTAACCAACCCTTTTTTATTGCTAAGCTGCTCCAGTGAAAATTGTGTCCGGATGATCAATCGTCCAACCAATTCTTGGATCTTAATTCTTTGGTGCTTCAGTGTAATAGCCTAA

Coding sequence (CDS)

ATGATCTTTCCTGTTGTTGACGACGGGATCGATCTGAATGGAGGCTATACGCCATCGAGGGATCAAGTATGTTGCCCAGGCAAGTACTCCACAGGGGTAGCAGTATGCTCAAGTTGCTTCTCTTTCAGTCATGCCATTTGCAAAATGAACCAATGTGAATACACACGCCCGACATCTCAGCTGCAAGACTGGATACCGAAGTCGAATCAGCGTTCCATTTTAGTGCCCATTCTACCATATAACGATGCAGCTGGTCATTTCGATATAAACACGGGAACAAACAAGGCAACATCAGTAATCACGGGGTATATTAAAAGGTTGGCTGGATTTCGAACCCGAATCAGCTTTACTGGTTTCACGAGGTCCATGAATGGCAAATTGTGGAATGAAAAGCTGTTTCCATTAACCAACCCTTTTTTATTGCTAAGCTGCTCCAGTGAAAATTGTGTCCGGATGATCAATCGTCCAACCAATTCTTGGATCTTAATTCTTTGGTGCTTCAGTGTAATAGCCTAA

Protein sequence

MIFPVVDDGIDLNGGYTPSRDQVCCPGKYSTGVAVCSSCFSFSHAICKMNQCEYTRPTSQLQDWIPKSNQRSILVPILPYNDAAGHFDINTGTNKATSVITGYIKRLAGFRTRISFTGFTRSMNGKLWNEKLFPLTNPFLLLSCSSENCVRMINRPTNSWILILWCFSVIA
Homology
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BLAST of Csor.00g233670 vs. NCBI nr
Match: KAG6589108.1 (hypothetical protein SDJN03_17673, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364 bits (934), Expect = 3.04e-127
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MIFPVVDDGIDLNGGYTPSRDQVCCPGKYSTGVAVCSSCFSFSHAICKMNQCEYTRPTSQ 60
           MIFPVVDDGIDLNGGYTPSRDQVCCPGKYSTGVAVCSSCFSFSHAICKMNQCEYTRPTSQ
Sbjct: 1   MIFPVVDDGIDLNGGYTPSRDQVCCPGKYSTGVAVCSSCFSFSHAICKMNQCEYTRPTSQ 60

Query: 61  LQDWIPKSNQRSILVPILPYNDAAGHFDINTGTNKATSVITGYIKRLAGFRTRISFTGFT 120
           LQDWIPKSNQRSILVPILPYNDAAGHFDINTGTNKATSVITGYIKRLAGFRTRISFTGFT
Sbjct: 61  LQDWIPKSNQRSILVPILPYNDAAGHFDINTGTNKATSVITGYIKRLAGFRTRISFTGFT 120

Query: 121 RSMNGKLWNEKLFPLTNPFLLLSCSSENCVRMINRPTNSWILILWCFSVIA 171
           RSMNGKLWNEKLFPLTNPFLLLSCSSENCVRMINRPTNSWILILWCFSVIA
Sbjct: 121 RSMNGKLWNEKLFPLTNPFLLLSCSSENCVRMINRPTNSWILILWCFSVIA 171

The following BLAST results are available for this feature:
BLAST of Csor.00g233670 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g233670 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589108.13.04e-127100.00hypothetical protein SDJN03_17673, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g233670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g233670 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g233670.m01Csor.00g233670.m01mRNA