Csor.00g231010 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g231010
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Dynein light chain
Location	Csor_Chr08: 4421319 .. 4421776 (+)
RNA-Seq Expression	Csor.00g231010
Synteny	Csor.00g231010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGGCAAAGCTTCGGTACAGGACACAGATATGCCTAGCAAGATGCAGATCCAAGCCATGGACGCTGCGTCTAAAGCTCTGGATCTCTATGATGTTTTCGATTGCAAATCCATTGCTGCCCACATAAAAAAGGTTCTCCCCCCCCCCCCCCCCCCCGCCTCTTTCTCTCTCTCTTCCCCTCTTCCCCTGTTTGATGGGTATGTGTAGAGGAATATGGTGGATTGCAGATGTTTTTTCTCGTCTTTAATGGCAGAATCCCAGGCTTTGATTTCTGAACTCGTTTGTTTGTGGATTTGCAGGATTTTGACCACAGATATGGGAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTGGGGACTCTCAACTTTCTCATCTTCAAAGGGGTGACATCTTCGCCCCAGTGA

mRNA sequence

ATGTTGGAAGGCAAAGCTTCGGTACAGGACACAGATATGCCTAGCAAGATGCAGATCCAAGCCATGGACGCTGCGTCTAAAGCTCTGGATCTCTATGATGTTTTCGATTGCAAATCCATTGCTGCCCACATAAAAAAGGATTTTGACCACAGATATGGGAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTGGGGACTCTCAACTTTCTCATCTTCAAAGGGGTGACATCTTCGCCCCAGTGA

Coding sequence (CDS)

ATGTTGGAAGGCAAAGCTTCGGTACAGGACACAGATATGCCTAGCAAGATGCAGATCCAAGCCATGGACGCTGCGTCTAAAGCTCTGGATCTCTATGATGTTTTCGATTGCAAATCCATTGCTGCCCACATAAAAAAGGATTTTGACCACAGATATGGGAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTGGGGACTCTCAACTTTCTCATCTTCAAAGGGGTGACATCTTCGCCCCAGTGA

Protein sequence

MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ

Homology

[Close]

BLAST of Csor.00g231010 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.0e-16
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          M E KA +++ DMP  MQ  A+D A++AL+ +++   K IAA+IKK+FD +Y   W C+V
Sbjct: 1  MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIE--KDIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFK 90
          G NFG + TH    FIYF LG +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAVLLFK 87

[Close]

BLAST of Csor.00g231010 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-15
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          M++ KA +++ DM   MQ  A+D A++AL+ Y++   K IAA+IKK+FD +Y   W C+V
Sbjct: 1  MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFK 90
          G NFG + TH    FIYF LG +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g231010 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          M + KA +++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD +Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFK 90
          G NFG + TH    FIYF LG +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g231010 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          M + KA +++ DM  +MQ  A+D A++AL+ Y++   K IAA+IKK+FD +Y   W C+V
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFK 90
          G NFG + TH    FIYF LG +  L+FK
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g231010 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          M + KA +++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD +Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFK 90
          G NFG + TH    FIYF LG +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of Csor.00g231010 vs. NCBI nr
Match: XP_022964212.1 (dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata] >XP_023000412.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima] >KAG6593463.1 hypothetical protein SDJN03_12939, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025803.1 hypothetical protein SDJN02_12301 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (510), Expect = 5.31e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96
          GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96

[Close]

BLAST of Csor.00g231010 vs. NCBI nr
Match: XP_023513963.1 (dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199 bits (507), Expect = 1.52e-64
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKASVQDTDMP+KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPNKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96
          GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96

[Close]

BLAST of Csor.00g231010 vs. NCBI nr
Match: XP_022964213.1 (dynein light chain LC6, flagellar outer arm-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 190 bits (482), Expect = 8.52e-61
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGV 91
          GSNFGCFFTHSKGSFIYFKLGTLNFLIFKG+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGI 91

[Close]

BLAST of Csor.00g231010 vs. NCBI nr
Match: XP_038897874.1 (dynein light chain LC6, flagellar outer arm-like [Benincasa hispida])

HSP 1 Score: 185 bits (470), Expect = 6.75e-59
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKA +QDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD+RYGSGWQCVV
Sbjct: 1  MLEGKALIQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS 94
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of Csor.00g231010 vs. NCBI nr
Match: XP_011659570.1 (dynein light chain LC6, flagellar outer arm [Cucumis sativus] >KGN45379.1 hypothetical protein Csa_016911 [Cucumis sativus])

HSP 1 Score: 184 bits (468), Expect = 1.36e-58
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS 94
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of Csor.00g231010 vs. ExPASy TrEMBL
Match: A0A6J1KDK4 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111494671 PE=3 SV=1)

HSP 1 Score: 201 bits (510), Expect = 2.57e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96
          GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96

[Close]

BLAST of Csor.00g231010 vs. ExPASy TrEMBL
Match: A0A6J1HH84 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111464299 PE=3 SV=1)

HSP 1 Score: 201 bits (510), Expect = 2.57e-65
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96
          GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ 96

[Close]

BLAST of Csor.00g231010 vs. ExPASy TrEMBL
Match: A0A6J1HK61 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111464299 PE=3 SV=1)

HSP 1 Score: 190 bits (482), Expect = 4.13e-61
Identity = 90/91 (98.90%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGV 91
          GSNFGCFFTHSKGSFIYFKLGTLNFLIFKG+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGI 91

[Close]

BLAST of Csor.00g231010 vs. ExPASy TrEMBL
Match: A0A5A7UW48 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002230 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 6.60e-59
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS 94
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of Csor.00g231010 vs. ExPASy TrEMBL
Match: A0A0A0K947 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 6.60e-59
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS 94
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of Csor.00g231010 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 157.1 bits (396), Expect = 6.9e-39
Identity = 74/93 (79.57%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKA V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD RYGSGWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTS 94
          GSNFGCFFTHSKG+FIYF+L TL FLIFKG ++
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAST 93

[Close]

BLAST of Csor.00g231010 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-38
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKA V++TDMP KMQ+QAM  AS++LDL+DVFD  SIAAHIKK+FD RYGSGWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVT 93
          G+NFGCFFTHSKG+FIYF LGTLNFLIFKG T
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKGAT 92

[Close]

BLAST of Csor.00g231010 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24
Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60
          MLEGKA + DTDM   M+  A+  ASKALD +DV +   IA  IKK+FD  YGSGWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSP 96
          G++FG F TH  G FI+F +G+L  L+FKG    P
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKGSVGEP 95

[Close]

BLAST of Csor.00g231010 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 101.3 bits (251), Expect = 4.5e-22
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCV 60
          MLEGKA V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD RYGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of Csor.00g231010 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 78.6 bits (192), Expect = 3.1e-15
Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 12  DMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHS 71
           DMP  MQ  A   A   LD  + F  K +A ++KK+FD  YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  KGSFIYFKLGTLNFLIFK 90
            G FIYF +  L  L+FK
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

The following BLAST results are available for this feature:

BLAST of Csor.00g231010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O02414	8.0e-16	47.19	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
Q22799	1.8e-15	46.07	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
P61285	2.3e-15	44.94	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
Q24117	2.3e-15	46.07	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]
P63167	2.3e-15	44.94	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]

BLAST of Csor.00g231010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964212.1	5.31e-65	100.00	dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]...	[more]
XP_023513963.1	1.52e-64	98.96	dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964213.1	8.52e-61	98.90	dynein light chain LC6, flagellar outer arm-like isoform X2 [Cucurbita moschata]	[more]
XP_038897874.1	6.75e-59	94.68	dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]	[more]
XP_011659570.1	1.36e-58	94.68	dynein light chain LC6, flagellar outer arm [Cucumis sativus] >KGN45379.1 hypoth...	[more]

BLAST of Csor.00g231010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KDK4	2.57e-65	100.00	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111494671 PE=3 SV=1	[more]
A0A6J1HH84	2.57e-65	100.00	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111464299 PE=3 SV=1	[more]
A0A6J1HK61	4.13e-61	98.90	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111464299 PE=3 SV=1	[more]
A0A5A7UW48	6.60e-59	94.68	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G0...	[more]
A0A0A0K947	6.60e-59	94.68	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1	[more]

BLAST of Csor.00g231010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	6.9e-39	79.57	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	1.2e-38	80.43	Dynein light chain type 1 family protein	[more]
AT4G27360.1	2.8e-24	54.74	Dynein light chain type 1 family protein	[more]
AT1G52240.1	4.5e-22	79.66	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	3.1e-15	48.72	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 5.2E-42 score: 155.6
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..89 e-value: 4.3E-32 score: 110.4
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..92
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 2..90 e-value: 4.3E-32 score: 112.0
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..89
None	No IPR available	PANTHER	PTHR11886:SF72	DYNEIN LIGHT CHAIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g231010.m01	Csor.00g231010.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding