Csor.00g230510 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g230510
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProlamin_like domain-containing protein
LocationCsor_Chr17: 3497658 .. 3498029 (+)
RNA-Seq ExpressionCsor.00g230510
SyntenyCsor.00g230510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTCCTCTTGTTAGTAGTAAATTTGCAAGGCTTTGTTCGAGTTACAAGGGCAGATGATGACTACAATTCACCGATATGGGATAGGTGGCTAGACGAAGATAGAGCTTACTATTTAAGACCGTGCTTGAATCTAATGAAGAGTGCGAAATGTCAAGTGCAACTCTATAATAATTACTTCAATCTTAGTAAGGAGGAATTGGACTTGAATTGTTGCGTTTTCATCCAAGTCATGGGAAAGAAGTGTACTCTTAACTTTGCAGGTTGGTTCAATTATCCAATTTTTGAAGTTTATAAGCCTAACCCTATGAAACTCTACAAAAGATGTATTGCAAGGCTTTCTTCGTCTATCCCACCTATGCCACTGTAA

mRNA sequence

ATGGTGGTCCTCTTGTTAGTAGTAAATTTGCAAGGCTTTGTTCGAGTTACAAGGGCAGATGATGACTACAATTCACCGATATGGGATAGGTGGCTAGACGAAGATAGAGCTTACTATTTAAGACCGTGCTTGAATCTAATGAAGAGTGCGAAATGTCAAGTGCAACTCTATAATAATTACTTCAATCTTAGTAAGGAGGAATTGGACTTGAATTGTTGCGTTTTCATCCAAGTCATGGGAAAGAAGTGTACTCTTAACTTTGCAGGTTGGTTCAATTATCCAATTTTTGAAGTTTATAAGCCTAACCCTATGAAACTCTACAAAAGATGTATTGCAAGGCTTTCTTCGTCTATCCCACCTATGCCACTGTAA

Coding sequence (CDS)

ATGGTGGTCCTCTTGTTAGTAGTAAATTTGCAAGGCTTTGTTCGAGTTACAAGGGCAGATGATGACTACAATTCACCGATATGGGATAGGTGGCTAGACGAAGATAGAGCTTACTATTTAAGACCGTGCTTGAATCTAATGAAGAGTGCGAAATGTCAAGTGCAACTCTATAATAATTACTTCAATCTTAGTAAGGAGGAATTGGACTTGAATTGTTGCGTTTTCATCCAAGTCATGGGAAAGAAGTGTACTCTTAACTTTGCAGGTTGGTTCAATTATCCAATTTTTGAAGTTTATAAGCCTAACCCTATGAAACTCTACAAAAGATGTATTGCAAGGCTTTCTTCGTCTATCCCACCTATGCCACTGTAA

Protein sequence

MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYFNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPPMPL
Homology
BLAST of Csor.00g230510 vs. NCBI nr
Match: KAG6575254.1 (hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263 bits (673), Expect = 5.26e-89
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0

Query: 1   MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 60
           MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY
Sbjct: 1   MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 60

Query: 61  FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP 120
           FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP
Sbjct: 61  FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP 120

Query: 121 MPL 123
           MPL
Sbjct: 121 MPL 123

BLAST of Csor.00g230510 vs. NCBI nr
Match: KAG6575249.1 (hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241 bits (615), Expect = 5.18e-80
Identity = 111/123 (90.24%), Postives = 116/123 (94.31%), Query Frame = 0

Query: 1   MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 60
           MVVLLL VNLQGFVRVT AD DYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY
Sbjct: 11  MVVLLLAVNLQGFVRVTSADVDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 70

Query: 61  FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP 120
           FNLSKEELDLNCCVF++VMGK C L+FAGWF+YPIFEVYKPNPM LYKRC+ARLSSSIPP
Sbjct: 71  FNLSKEELDLNCCVFVKVMGKNCALDFAGWFDYPIFEVYKPNPMNLYKRCVARLSSSIPP 130

Query: 121 MPL 123
           M L
Sbjct: 131 MSL 133

BLAST of Csor.00g230510 vs. NCBI nr
Match: KAG6575255.1 (hypothetical protein SDJN03_25894, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (514), Expect = 1.00e-64
Identity = 93/114 (81.58%), Postives = 104/114 (91.23%), Query Frame = 0

Query: 3   VLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYFN 62
           VLLL VNLQGFVRVTRA+DDYNSPIWDRWLDE RA YLRPCLNLMKSAKCQVQLYNNYFN
Sbjct: 13  VLLLAVNLQGFVRVTRANDDYNSPIWDRWLDEGRAPYLRPCLNLMKSAKCQVQLYNNYFN 72

Query: 63  LSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSS 116
           + K+++DLNCCVF++VMGK C  +FAG F+Y + EVYKPNPMKLYKRC+ARLSS
Sbjct: 73  IRKKKVDLNCCVFVKVMGKNCARHFAGCFDYSL-EVYKPNPMKLYKRCVARLSS 125

BLAST of Csor.00g230510 vs. NCBI nr
Match: KAG6575251.1 (hypothetical protein SDJN03_25890, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196 bits (499), Expect = 2.14e-62
Identity = 88/116 (75.86%), Postives = 101/116 (87.07%), Query Frame = 0

Query: 1   MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 60
           +VVLLL VNLQ FVR+T+A+DDYNSPIWDRWLD  RA YLRPCLNLMKS KCQVQLYNNY
Sbjct: 11  LVVLLLAVNLQVFVRLTKANDDYNSPIWDRWLDAGRAPYLRPCLNLMKSTKCQVQLYNNY 70

Query: 61  FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSS 116
           FN+ K+++DLNCCVF++VMG+ C   FAG F+YP  EVYKPNPMKLYK C+ARLSS
Sbjct: 71  FNIRKKKMDLNCCVFVKVMGENCARRFAGCFDYPSLEVYKPNPMKLYKTCVARLSS 126

BLAST of Csor.00g230510 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183 bits (464), Expect = 4.19e-57
Identity = 80/122 (65.57%), Postives = 100/122 (81.97%), Query Frame = 0

Query: 1   MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 60
           MV+LLL +NL    + + ADDDYNSPIWDRW+DEDR   LRPCL++MKSAKCQV+LYN Y
Sbjct: 4   MVILLLAINLAFLAQPSTADDDYNSPIWDRWVDEDRGINLRPCLDMMKSAKCQVELYNYY 63

Query: 61  FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP 120
           FN+SK+ELDLNCCVF++VMGK+C   FAGWF +P FEV++ NPMK+YK C+ RL + +PP
Sbjct: 64  FNISKKELDLNCCVFVKVMGKRCARAFAGWFRFPEFEVFELNPMKVYKNCVGRLDA-LPP 123

Query: 121 MP 122
            P
Sbjct: 124 AP 124

BLAST of Csor.00g230510 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1)

HSP 1 Score: 171 bits (433), Expect = 1.07e-52
Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 0

Query: 2   VVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYF 61
           V+LL  +NL   V+ +  D+DYNSPIWD W+DEDR Y LRPCL+ M+SAKCQV+LYN YF
Sbjct: 5   VILLFAINLSKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVELYNYYF 64

Query: 62  NLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPPM 121
           N+SK+ELDLNCCVF++VMGKKC   F  W+ +P  E+Y+PNPMK+Y  CI RL +  PP 
Sbjct: 65  NISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDAP-PPA 124

BLAST of Csor.00g230510 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 2.21e-51
Identity = 74/123 (60.16%), Postives = 95/123 (77.24%), Query Frame = 0

Query: 1   MVVLLLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 60
           MV+LL  +NL   V+ +  D+DYNS IW+ WLDEDRA+ LRPCL+ M+SAKCQV+LYN Y
Sbjct: 11  MVILLSAINLAKLVQSSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYY 70

Query: 61  FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP 120
           FN+SK+ELDLNCCVF++VMGKKC   F  W+ +P  E+Y+PNPMK+Y  C  RLS+  PP
Sbjct: 71  FNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCATRLSAP-PP 130

Query: 121 MPL 123
            P+
Sbjct: 131 TPI 132

BLAST of Csor.00g230510 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 1.40e-50
Identity = 76/122 (62.30%), Postives = 94/122 (77.05%), Query Frame = 0

Query: 3   VLLLVVNLQGFVRVTRAD--DDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNY 62
           +LLL VNL   V  + AD  DDYNSPIW+ W+DEDRA  LRPCL++MKSAKCQVQLYN Y
Sbjct: 14  ILLLAVNLAILVHPSMADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYY 73

Query: 63  FNLSKEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP 122
           FN+SK+ELDL CCVF+++MGK C   FAGW+ +P  EVY+PNPM +Y  C+ RL + +PP
Sbjct: 74  FNISKKELDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQA-LPP 133

BLAST of Csor.00g230510 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1)

HSP 1 Score: 142 bits (358), Expect = 3.57e-41
Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 0

Query: 5   LLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYFNLS 64
           LLVV+    V+ +  DD+  S IW  WLDEDRA  L PCL++M+S KCQV+LYN YFN+S
Sbjct: 16  LLVVDSLALVQPSTVDDNGISSIWSDWLDEDRAPTLAPCLHMMRSEKCQVELYNYYFNIS 75

Query: 65  KEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIP 119
           K+ELDL+CCV++  MGKKC   F  WF++P  E  KPNPMK+Y  C  RL+   P
Sbjct: 76  KKELDLSCCVYVNYMGKKCAAAFEFWFSFPSLEALKPNPMKVYNNCFKRLTFPAP 130

BLAST of Csor.00g230510 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 8.15e-36
Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 0

Query: 5   LLVVNLQGFVRVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYFNLS 64
           LLVV+    V  +  DD+  S IW  W+D+DRA  L  CL LMKS KCQV+LYN YFN S
Sbjct: 19  LLVVDSLALVHPSIIDDNGISSIWSGWIDKDRAPILASCLYLMKSDKCQVELYNYYFNKS 78

Query: 65  KEELDLNCCVFIQVMGKKCTLNFAGWFNYPIFEVYKPNPMKLYKRCIARLSSSIPP 120
           K+E+DL+CCV++  +G++C  +F  WF+   F+  KPNPMKLY  C  RL+   PP
Sbjct: 79  KKEVDLSCCVYVNYIGEECAASFESWFSSLGFKALKPNPMKLYNNCFKRLTVPAPP 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575254.15.26e-89100.00hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575249.15.18e-8090.24hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575255.11.00e-6481.58hypothetical protein SDJN03_25894, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575251.12.14e-6275.86hypothetical protein SDJN03_25890, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6578867.14.19e-5765.57hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5D3C2801.07e-5261.16Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0KEB82.21e-5160.16Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0543... [more]
A0A5A7TZR11.40e-5062.30Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0KQ413.57e-4154.78Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G3818... [more]
A0A0A0L5358.15e-3650.86Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0083... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008502Prolamin-like domainPFAMPF05617Prolamin_likecoord: 43..110
e-value: 2.8E-7
score: 30.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g230510.m01Csor.00g230510.m01mRNA