Csor.00g230300 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g230300
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionStructural constituent of nuclear pore isoform 1
LocationCsor_Chr17: 3139977 .. 3143084 (+)
RNA-Seq ExpressionCsor.00g230300
SyntenyCsor.00g230300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTCAAATCGCGTCCTGTAGTTTCATCCACCTGCAACAACTGCGGTTGCGACACTTGCAAGAGCTTCTTCTGTGGAAGAGAAATCCAGAGTTTAGATACCAAAGCTGGGAAATCTCTTCACAAATTTGATTTAGGACCTGTTCCATCGCGTGCCGAAGTTGATGCTGCAGTTACTGCGCTTCAGAGGTGAGTTTCCGTAACACTTGATTTTGTATTTTTGGTTTCTGTTGTGTGAATTGTGTAGGGCTTTTTTTTCTTGTGGATTTGGTGTATATTATAGGAAGAGATGAAATCTGGACTAGAATCGTTGATTTCTTGATATATTCGCACACACATGGATGCATAAAGCTCCTTCAATTTTCCTCTGCCAATTTGTATCCCTCAGTTAATCAAAAGCAAGATGGAAGATTCCAAATTAGTTACTCCTCTTCATATTCCCTTTGACAGAGGCAGAGCCTGATGTTTTCTTGCTTTAGGGATAGCCAAAATTTTACAACTCTTATATATACACACACACACACACATATGCCAACCCCACAGCCTGAACTTTGGAGACATCAAGGGTTTTTCTTATGAAGCTCATTTGAAATCAGTCTAATGGGCAAATTACACCCTTCCTTCTCCCTTTCTGGCTGTGCCATGCTTCTTGAAACCAACAAGTCAGTTGGGGTCACTGGGCCCTGAAGGGGGTGGATTGTGAGGTCCCACATCGGTTGAGGAGGAGAACGAAACATTCTTTATAAGAGTGTAGTAACCTCTCTCTAGCAGACGCGTTTTAAAAATCTTGAAGGGAAGCCTAAAAGAGAAAGTCTAAAGAGGACAATATCTCTGTCTTTCATGTGCTTGCAAACTCTTTTATGAAACAATTTCATTGATGGTAAAGAACCCCACTGCAAAGAGTTACAAAAAGACTCTACAATTGGGTAAAATGAGTATCTCTCAATTTGGATAAAAGAGATGAGAAACTATATAAACGAAAGGAGAGTACATTCACTCATTGTGTAACGGCCCAAGTCCACCGCTAGCAGATATTATTCTCTTTGGGCTTTTCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGTGTATGTTAGGGGAAGGTTTCCACACTCTCATAAAGGGTGTTTCGTTCTCCTTCCCAACCAAAAAAAACCAATCAAAAGTGAGTTACTTATATTTGAAAATTCTTTGATTCCCTTCTTGCCAAGTTACCCAAAGTAACACCCTAGTAAAGCGCACCCACAAGACTGTTTTTCCTTTTGATGTTATATGAAGCTTTCAGTTTACCATTTTTACCTCATTCTTGAATTTAGAATTTCTTGATTAAATTTGTTCATAAGAAATTATGGGCACGATAAAAAGTTGTTATGGAGTTGCAATCTTTATCAGTTTGCTGCAGGAATATTTTTCAATTGAATCGCTGTCAAAATGGCTTCAGCCGCTGGTGAACTCCTACGATTCAAGCATTTTGCATTCTCGTGGCTATCAATTACTTTGCAAAGGTTTTCAATGGCTGCTAACAGATCCTACTTTGAAGGTACAAATCAGGGATGCCTTGCCTCTTTAATAATGACTATTTGTTTATCTCAACAAGTTCTTTTATTCATCTTTTTTGGTCACAGAAACAAAACTTCCTTTGACAATGAAAGCTTACAACATAAATAGCATCTAATAAACAAAATTTTGATACATCTCAAAAACAACCCAAAAGTTCAACAAAATAGTCAAGAGTTATAGAATAACTTAGAAACAAACATCAACACAAACAATGAAACTTGGCCAAGTCCATGAACTTTCTCTAATCTCTGAACTTTTCATTATGATTCCTATTATTTCTTTCTAACCAAACTGTCAAACATGTTTTGACTGCATTCGTCCCGATAATTGTAGCTTTTCCTTTCAGTCCTTGGCCACTCGGCATTTGAATCATATTGTTCTTCATTGTGCTGATCAATATCCAAAAAAACGTGAAAGTTTCCAAAATCACTTGCTATATAATCACAAAACAGAAGTAAGGGTTCAAATTTCTCCTGATTTTCGGCGTAAAACCTACCAACTGAGCTGTAAGGACATATTTGGATCTCCTTCACAACATTTTAGCTGTATTTATACATTCAAGGCAAGAAGACCAGCAAACAATTTAAATATTATTGAAATAAATGGATATAACCCAATCATCTTTCTTTGTTGTATGTTTTTTCTTGGGAGTTCTATTTTTCAAGGATCGCCGTTTCATTCAGGGTCTGGTAGTTTCATTGTGTTTGGACAAAAATGTTTGGGATGCTATTAAAAACAATGGAATTGTGGAGAAGCTCCAGGAGCTACCTTCTTCAGGTTTGTAATGTAGTCTGACAAATTTAGTTACTATGTGTTATTGAGATAACGAAATTGTAATATAGTCTGGCCAGTCTGTAATAGTCCAAGTCCACCGCTAGTAGATGTTGTCCTTTTTGGGTTTTCCCTTCTGGACTTCTCTCAAGATTTTTAAAATGCGTCTGCTTGGGAGAGTTTTCCCACCCTTATAAATAATGCTTCATTCTCCTCTCAACTGATGTGAGATCTCACAATCCACCTCCCTTGGGGACCAACATCCTTGATGGCACATCGCTTGATGTCTGACTGTAATACTATTTGTAACAAAGTATTCTTTATATAAGAGTGTAGAAACCTCTTTCTAGCAAGACGCGTTTTAAAATCTTGAGGGGTAGTTCAGAAGTGAAAGCTCAAAGAGGACAATATCTGTTAGCAGTGGGCTTGGACACCTTTCTGTCTCCCTTTTGCCTCAAGACTTGGAATTGCCTTCTTTATTGTTATTATTGTTGTTCTCTTATGTCAGAAGGTGGAAATGGAAACCTTGGGAGCTCCAAACCGGGAGCTGACATTGGTAGTGTCATTCTAAGCTGGATTTTGCAGATGTCACTAACAAAAATCTGGGAGCTAGTACAAAACTTTGTGGTCCTGTTGAACAATGCATTTCTTTTTCCTGGGAAAGAGAAACTTAAGGCAGAGAAAAGAGAGGAGATAGATGAAAAAATCCAATCTTCATTTGTTCTGTCCTTGATCATCATGTTGATTGTGGTTGTCTCTCGGGTTCAGATTGCATGA

mRNA sequence

ATGGCTTTCAAATCGCGTCCTGTAGTTTCATCCACCTGCAACAACTGCGGTTGCGACACTTGCAAGAGCTTCTTCTGTGGAAGAGAAATCCAGAGTTTAGATACCAAAGCTGGGAAATCTCTTCACAAATTTGATTTAGGACCTGTTCCATCGCGTGCCGAAGTTGATGCTGCAGTTACTGCGCTTCAGAGTTTGCTGCAGGAATATTTTTCAATTGAATCGCTGTCAAAATGGCTTCAGCCGCTGGTGAACTCCTACGATTCAAGCATTTTGCATTCTCGTGGCTATCAATTACTTTGCAAAGGTTTTCAATGGCTGCTAACAGATCCTACTTTGAAGGATCGCCGTTTCATTCAGGGTCTGGTAGTTTCATTGTGTTTGGACAAAAATGTTTGGGATGCTATTAAAAACAATGGAATTGTGGAGAAGCTCCAGGAGCTACCTTCTTCAGAAGGTGGAAATGGAAACCTTGGGAGCTCCAAACCGGGAGCTGACATTGGTAGTGTCATTCTAAGCTGGATTTTGCAGATGTCACTAACAAAAATCTGGGAGCTAGTACAAAACTTTGTGGTCCTGTTGAACAATGCATTTCTTTTTCCTGGGAAAGAGAAACTTAAGGCAGAGAAAAGAGAGGAGATAGATGAAAAAATCCAATCTTCATTTGTTCTGTCCTTGATCATCATGTTGATTGTGGTTGTCTCTCGGGTTCAGATTGCATGA

Coding sequence (CDS)

ATGGCTTTCAAATCGCGTCCTGTAGTTTCATCCACCTGCAACAACTGCGGTTGCGACACTTGCAAGAGCTTCTTCTGTGGAAGAGAAATCCAGAGTTTAGATACCAAAGCTGGGAAATCTCTTCACAAATTTGATTTAGGACCTGTTCCATCGCGTGCCGAAGTTGATGCTGCAGTTACTGCGCTTCAGAGTTTGCTGCAGGAATATTTTTCAATTGAATCGCTGTCAAAATGGCTTCAGCCGCTGGTGAACTCCTACGATTCAAGCATTTTGCATTCTCGTGGCTATCAATTACTTTGCAAAGGTTTTCAATGGCTGCTAACAGATCCTACTTTGAAGGATCGCCGTTTCATTCAGGGTCTGGTAGTTTCATTGTGTTTGGACAAAAATGTTTGGGATGCTATTAAAAACAATGGAATTGTGGAGAAGCTCCAGGAGCTACCTTCTTCAGAAGGTGGAAATGGAAACCTTGGGAGCTCCAAACCGGGAGCTGACATTGGTAGTGTCATTCTAAGCTGGATTTTGCAGATGTCACTAACAAAAATCTGGGAGCTAGTACAAAACTTTGTGGTCCTGTTGAACAATGCATTTCTTTTTCCTGGGAAAGAGAAACTTAAGGCAGAGAAAAGAGAGGAGATAGATGAAAAAATCCAATCTTCATTTGTTCTGTCCTTGATCATCATGTTGATTGTGGTTGTCTCTCGGGTTCAGATTGCATGA

Protein sequence

MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVTALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQGLVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLTKIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA
Homology
BLAST of Csor.00g230300 vs. NCBI nr
Match: KAG6575228.1 (hypothetical protein SDJN03_25867, partial [Cucurbita argyrosperma subsp. sororia] >KAG6575233.1 hypothetical protein SDJN03_25872, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 471 bits (1211), Expect = 3.24e-167
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT
Sbjct: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG
Sbjct: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT
Sbjct: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA
Sbjct: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239

BLAST of Csor.00g230300 vs. NCBI nr
Match: XP_022959467.1 (uncharacterized protein LOC111460433 [Cucurbita moschata])

HSP 1 Score: 446 bits (1148), Expect = 1.05e-157
Identity = 230/239 (96.23%), Postives = 231/239 (96.65%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT
Sbjct: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           ALQSLLQEYFS ESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLK      G
Sbjct: 61  ALQSLLQEYFSTESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLK------G 120

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSK GADIGSVILSWILQMSLT
Sbjct: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKRGADIGSVILSWILQMSLT 180

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KIWEL+QNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA
Sbjct: 181 KIWELIQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 233

BLAST of Csor.00g230300 vs. NCBI nr
Match: XP_023549361.1 (uncharacterized protein LOC111807735 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 437 bits (1125), Expect = 5.99e-154
Identity = 226/239 (94.56%), Postives = 228/239 (95.40%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKS PVVSSTCNNCGCDTCKS FCG EIQSLDTKA KSLHKFDLGPVPSRAEVDAAVT
Sbjct: 17  MAFKSPPVVSSTCNNCGCDTCKSCFCGTEIQSLDTKAPKSLHKFDLGPVPSRAEVDAAVT 76

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDP+LK      G
Sbjct: 77  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPSLK------G 136

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT
Sbjct: 137 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 196

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KIWEL+QNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSR QIA
Sbjct: 197 KIWELIQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRAQIA 249

BLAST of Csor.00g230300 vs. NCBI nr
Match: XP_023006653.1 (uncharacterized protein LOC111499314 [Cucurbita maxima])

HSP 1 Score: 418 bits (1075), Expect = 1.45e-146
Identity = 219/239 (91.63%), Postives = 223/239 (93.31%), Query Frame = 0

Query: 1   MAFKSRPVVSS-TCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAV 60
           MAFKS PVVSS TC+NCGCDTCKS FCGREIQSLDTKAGKSLHKFDLGPVPSR+EVDAAV
Sbjct: 1   MAFKSPPVVSSSTCDNCGCDTCKSLFCGREIQSLDTKAGKSLHKFDLGPVPSRSEVDAAV 60

Query: 61  TALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQ 120
            ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGY LLCKG QWLLTDPTLK      
Sbjct: 61  IALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYHLLCKGLQWLLTDPTLK------ 120

Query: 121 GLVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSL 180
           GLVVSLCLDKNV DAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSL
Sbjct: 121 GLVVSLCLDKNVSDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSL 180

Query: 181 TKIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQI 238
           TKIWEL+QNFV LLNNAFLFPGKEKL+ EKREEIDEKIQSSFVLSLIIMLIVVVSR QI
Sbjct: 181 TKIWELIQNFVDLLNNAFLFPGKEKLEGEKREEIDEKIQSSFVLSLIIMLIVVVSRAQI 233

BLAST of Csor.00g230300 vs. NCBI nr
Match: XP_038875839.1 (uncharacterized protein LOC120068201 [Benincasa hispida])

HSP 1 Score: 335 bits (859), Expect = 1.07e-113
Identity = 178/239 (74.48%), Postives = 199/239 (83.26%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           M FKS  VVSST +NC  DTC S   GREI+++D KAG  L K DLGPVPS  EVDAAV 
Sbjct: 1   MDFKSPSVVSST-SNCSDDTCNSLLYGREIEAIDRKAGTRLPKIDLGPVPSPVEVDAAVA 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           ALQSLLQE FS+ S+SKWLQPL+NS DSSILHSRGY+LLCKG QWLLTDPT K      G
Sbjct: 61  ALQSLLQESFSLGSVSKWLQPLMNSCDSSILHSRGYRLLCKGLQWLLTDPTFK------G 120

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LV+SLCLDK+VW+AI+NNGIVEKLQELPSSEGGNGN  SSK G D G+ ILSWIL MSLT
Sbjct: 121 LVISLCLDKDVWNAIRNNGIVEKLQELPSSEGGNGNPESSKQGPDFGNAILSWILLMSLT 180

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KI EL++NFV LLNNAF FPGKEKLKAEKR+EIDEKIQSSF LSL+I+LIV+V+RVQ+A
Sbjct: 181 KIRELIENFVFLLNNAFRFPGKEKLKAEKRDEIDEKIQSSFFLSLVILLIVIVARVQMA 232

BLAST of Csor.00g230300 vs. ExPASy TrEMBL
Match: A0A6J1H4L7 (uncharacterized protein LOC111460433 OS=Cucurbita moschata OX=3662 GN=LOC111460433 PE=4 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 5.07e-158
Identity = 230/239 (96.23%), Postives = 231/239 (96.65%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT
Sbjct: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           ALQSLLQEYFS ESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLK      G
Sbjct: 61  ALQSLLQEYFSTESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLK------G 120

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSK GADIGSVILSWILQMSLT
Sbjct: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKRGADIGSVILSWILQMSLT 180

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KIWEL+QNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA
Sbjct: 181 KIWELIQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 233

BLAST of Csor.00g230300 vs. ExPASy TrEMBL
Match: A0A6J1L5J5 (uncharacterized protein LOC111499314 OS=Cucurbita maxima OX=3661 GN=LOC111499314 PE=4 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 7.04e-147
Identity = 219/239 (91.63%), Postives = 223/239 (93.31%), Query Frame = 0

Query: 1   MAFKSRPVVSS-TCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAV 60
           MAFKS PVVSS TC+NCGCDTCKS FCGREIQSLDTKAGKSLHKFDLGPVPSR+EVDAAV
Sbjct: 1   MAFKSPPVVSSSTCDNCGCDTCKSLFCGREIQSLDTKAGKSLHKFDLGPVPSRSEVDAAV 60

Query: 61  TALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQ 120
            ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGY LLCKG QWLLTDPTLK      
Sbjct: 61  IALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYHLLCKGLQWLLTDPTLK------ 120

Query: 121 GLVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSL 180
           GLVVSLCLDKNV DAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSL
Sbjct: 121 GLVVSLCLDKNVSDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSL 180

Query: 181 TKIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQI 238
           TKIWEL+QNFV LLNNAFLFPGKEKL+ EKREEIDEKIQSSFVLSLIIMLIVVVSR QI
Sbjct: 181 TKIWELIQNFVDLLNNAFLFPGKEKLEGEKREEIDEKIQSSFVLSLIIMLIVVVSRAQI 233

BLAST of Csor.00g230300 vs. ExPASy TrEMBL
Match: A0A5D3DM87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003190 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 8.35e-105
Identity = 171/239 (71.55%), Postives = 196/239 (82.01%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKS   V ST ++ G +T  S   GREI++L T        FDLGPVPS  EV+AAV 
Sbjct: 1   MAFKSSSEVLSTSHSTG-NTSNSLRHGREIEALPTP----FPNFDLGPVPSPLEVEAAVA 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           ALQSLLQE+FS+ES+SKWLQPL+NS  SSILHSRGYQLLCKGFQW+LTDPT K      G
Sbjct: 61  ALQSLLQEWFSLESMSKWLQPLMNSSSSSILHSRGYQLLCKGFQWILTDPTFK------G 120

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LV+SLCLDK+VW+AI+N+GIVEKLQELPSS GGNGN GSSK G D G+VILSWILQ+SLT
Sbjct: 121 LVISLCLDKDVWNAIRNHGIVEKLQELPSS-GGNGNTGSSKQGPDFGNVILSWILQISLT 180

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KI EL++NFV LLNNAF FPGKEKLK EK++EIDEKIQSS VLSL++MLIVVV+RVQIA
Sbjct: 181 KIRELIENFVSLLNNAFCFPGKEKLKPEKKDEIDEKIQSSLVLSLVVMLIVVVARVQIA 227

BLAST of Csor.00g230300 vs. ExPASy TrEMBL
Match: A0A1S3CC23 (uncharacterized protein LOC103498772 OS=Cucumis melo OX=3656 GN=LOC103498772 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 8.35e-105
Identity = 171/239 (71.55%), Postives = 196/239 (82.01%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKS   V ST ++ G +T  S   GREI++L T        FDLGPVPS  EV+AAV 
Sbjct: 1   MAFKSSSEVLSTSHSTG-NTSNSLRHGREIEALPTP----FPNFDLGPVPSPLEVEAAVA 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           ALQSLLQE+FS+ES+SKWLQPL+NS  SSILHSRGYQLLCKGFQW+LTDPT K      G
Sbjct: 61  ALQSLLQEWFSLESMSKWLQPLMNSSSSSILHSRGYQLLCKGFQWILTDPTFK------G 120

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LV+SLCLDK+VW+AI+N+GIVEKLQELPSS GGNGN GSSK G D G+VILSWILQ+SLT
Sbjct: 121 LVISLCLDKDVWNAIRNHGIVEKLQELPSS-GGNGNTGSSKQGPDFGNVILSWILQISLT 180

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KI EL++NFV LLNNAF FPGKEKLK EK++EIDEKIQSS VLSL++MLIVVV+RVQIA
Sbjct: 181 KIRELIENFVSLLNNAFCFPGKEKLKPEKKDEIDEKIQSSLVLSLVVMLIVVVARVQIA 227

BLAST of Csor.00g230300 vs. ExPASy TrEMBL
Match: A0A0A0KFP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108540 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 1.09e-93
Identity = 158/239 (66.11%), Postives = 189/239 (79.08%), Query Frame = 0

Query: 1   MAFKSRPVVSSTCNNCGCDTCKSFFCGREIQSLDTKAGKSLHKFDLGPVPSRAEVDAAVT 60
           MAFKS   V ST ++    +      GREI++L T        FDLGPVPS  EVDAAVT
Sbjct: 1   MAFKSSSQVLSTSHSTDNTSNSLRHGGREIETLPTP----FPNFDLGPVPSAVEVDAAVT 60

Query: 61  ALQSLLQEYFSIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQG 120
           AL+SLLQE+FS+ES+SKWLQPL+NS  SSIL SRGY+LL KGF+W+L DPT K      G
Sbjct: 61  ALRSLLQEWFSLESVSKWLQPLMNSSCSSILDSRGYRLLRKGFKWILIDPTFK------G 120

Query: 121 LVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSKPGADIGSVILSWILQMSLT 180
           LV+SLCLDK+VW+AI N+GIVEKLQELPSS GGNGN GSSK G++ G+VILSWILQMS +
Sbjct: 121 LVISLCLDKDVWNAIGNHGIVEKLQELPSS-GGNGNTGSSKQGSEFGNVILSWILQMSFS 180

Query: 181 KIWELVQNFVVLLNNAFLFPGKEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSRVQIA 239
           KI EL++NFV LLN AF FPGKE LK EK++E+DEKIQS+F+LSL+IM+IVVV+RVQIA
Sbjct: 181 KIRELLENFVSLLNYAFCFPGKENLKPEKKDEMDEKIQSAFILSLVIMMIVVVARVQIA 228

BLAST of Csor.00g230300 vs. TAIR 10
Match: AT4G25170.1 (Uncharacterised conserved protein (UCP012943) )

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-10
Identity = 47/172 (27.33%), Postives = 86/172 (50.00%), Query Frame = 0

Query: 71  SIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQGLVVSLCLDKN 130
           S  S S W++P ++   S  L    Y  +   F  L T+P+      +Q +VVSL  DK 
Sbjct: 176 SFGSDSDWMEPSMHLCHSRTLKPHAYDQVYNAFDLLRTEPS------VQKMVVSLSSDKA 235

Query: 131 VWDAIKNNGIVEKLQELPSS--EGGNGNLGSSKPGADIGSVILSWILQMSLTKIWEL--- 190
           VW+A+ NN +V ++++L ++       N   +    +  +  + W+   ++ K  E+   
Sbjct: 236 VWEAVMNNDVVREIRDLYNNGISQDEENSEDTPRENNAATDFIKWVFDNTMVKATEVFVK 295

Query: 191 VQNFVVLLNNAFLFPG--KEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSR 236
           +   V  L N +   G   +   A+    ++EK+ +S +LS+I+ML+V+VSR
Sbjct: 296 ITKVVTELFNCYNGDGVNNKGKDAKFNNWLEEKLTTSVLLSIIVMLVVMVSR 341

BLAST of Csor.00g230300 vs. TAIR 10
Match: AT4G25170.2 (Uncharacterised conserved protein (UCP012943) )

HSP 1 Score: 62.4 bits (150), Expect = 5.7e-10
Identity = 47/172 (27.33%), Postives = 86/172 (50.00%), Query Frame = 0

Query: 71  SIESLSKWLQPLVNSYDSSILHSRGYQLLCKGFQWLLTDPTLKDRRFIQGLVVSLCLDKN 130
           S  S S W++P ++   S  L    Y  +   F  L T+P+      +Q +VVSL  DK 
Sbjct: 191 SFGSDSDWMEPSMHLCHSRTLKPHAYDQVYNAFDLLRTEPS------VQKMVVSLSSDKA 250

Query: 131 VWDAIKNNGIVEKLQELPSS--EGGNGNLGSSKPGADIGSVILSWILQMSLTKIWEL--- 190
           VW+A+ NN +V ++++L ++       N   +    +  +  + W+   ++ K  E+   
Sbjct: 251 VWEAVMNNDVVREIRDLYNNGISQDEENSEDTPRENNAATDFIKWVFDNTMVKATEVFVK 310

Query: 191 VQNFVVLLNNAFLFPG--KEKLKAEKREEIDEKIQSSFVLSLIIMLIVVVSR 236
           +   V  L N +   G   +   A+    ++EK+ +S +LS+I+ML+V+VSR
Sbjct: 311 ITKVVTELFNCYNGDGVNNKGKDAKFNNWLEEKLTTSVLLSIIVMLVVMVSR 356

BLAST of Csor.00g230300 vs. TAIR 10
Match: AT5G61490.1 (Uncharacterised conserved protein (UCP012943) )

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-09
Identity = 57/197 (28.93%), Postives = 99/197 (50.25%), Query Frame = 0

Query: 50  PSRAEVDAAVTALQSLLQEYFSIES---LSK-----WLQPLVNSYDSSILHSRGYQLLCK 109
           P   EVD A +ALQ +  +    ES   LS+     W++P +   ++S+L       L  
Sbjct: 75  PELDEVDDAFSALQLMFNDDDDEESGDQLSESEFVDWIEPSLQLCNTSLLQPFMLDRLYD 134

Query: 110 GFQWLLTDPTLKDRRFIQGLVVSLCLDKNVWDAIKNNGIVEKLQELPSSEGGNGNLGSSK 169
            F    TDP+      +Q +V+SL  DK VWDA+ NN +V +L  + ++E    + GS+ 
Sbjct: 135 AFHVFQTDPS------VQRMVMSLTSDKAVWDAVMNNEVVREL--ISNAERSEEDSGSA- 194

Query: 170 PGADIGSVILSWILQMSLTKIWELVQNFVVLLNNAF-LFPGKEK-LKAEKREEIDEKIQS 229
                 +  L  + + S  KI + ++     + + F + PG E  + A       EK+Q 
Sbjct: 195 ------ANFLRRLFERSAVKIMDAMERVTKYVTDLFNVVPGDETVVLASGAAPKMEKLQM 254

Query: 230 SFVLSLIIMLIVVVSRV 237
           + +L+++++LIV+V+RV
Sbjct: 255 TVLLAIVVLLIVLVTRV 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575228.13.24e-167100.00hypothetical protein SDJN03_25867, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022959467.11.05e-15796.23uncharacterized protein LOC111460433 [Cucurbita moschata][more]
XP_023549361.15.99e-15494.56uncharacterized protein LOC111807735 [Cucurbita pepo subsp. pepo][more]
XP_023006653.11.45e-14691.63uncharacterized protein LOC111499314 [Cucurbita maxima][more]
XP_038875839.11.07e-11374.48uncharacterized protein LOC120068201 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1H4L75.07e-15896.23uncharacterized protein LOC111460433 OS=Cucurbita moschata OX=3662 GN=LOC1114604... [more]
A0A6J1L5J57.04e-14791.63uncharacterized protein LOC111499314 OS=Cucurbita maxima OX=3661 GN=LOC111499314... [more]
A0A5D3DM878.35e-10571.55Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CC238.35e-10571.55uncharacterized protein LOC103498772 OS=Cucumis melo OX=3656 GN=LOC103498772 PE=... [more]
A0A0A0KFP61.09e-9366.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108540 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G25170.15.7e-1027.33Uncharacterised conserved protein (UCP012943) [more]
AT4G25170.25.7e-1027.33Uncharacterised conserved protein (UCP012943) [more]
AT5G61490.12.8e-0928.93Uncharacterised conserved protein (UCP012943) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33625OS08G0179900 PROTEINcoord: 21..238
NoneNo IPR availablePANTHERPTHR33625:SF2SUBFAMILY NOT NAMEDcoord: 21..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g230300.m01Csor.00g230300.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane