Csor.00g229760 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGGTGTCTACTTCTCTCGCATCTCAGCTCTCAGCTATCAGATTGTCCACTTCCAAGTCCGACATTTCTCAGACTCTGTTTCAGAACGTCCACTCACAAATCCGCCTTGCATCCTCCCGGAAAGGTCCCCGTGGTGTTGTCACCATGGCCGGTTCCGGCAAGGTATTTCTCCGTTTTTTGTTAGTTTGTTATTGATTTGCGCTGGAATCGTTTCCGCTACTTGAAGAACTTTTTGATTAGTGTGTCGATCATCATTCTTAACCTAGCGGCTAGCGTCTTGTGTTCGTAACTGTGTCTTAACAGTAGGGAAAGAGAATGCGTCGGATGTGGAATAAGGAGTTTCTTTGCCTATTTTTCTTGTTCGTAGCCGTTGGTCAATTTGGAATAGGCGATGACTCCTAAGTACAAATCTGTTTAAGCTATCAATTTTTCCAGCTTTTTTGTAGATCATACTTGTGAATTGTGATTAGGATTCGTTCAAGATTTAATTGTTACTCGCAACTTTTCGGTTCCATATTTCATGTCTCCCAAGCCCTCCCGCAATTTTTAGTACTGTGGATTATACTTATTGCCACAGCTTTAATGATTCTTTTTCTTCAAATTGTTATTTACCCAATCCTTGAATTAACAAGGCCATGGTTTTTACGGGTTTTATTAATTTATTAATACTAGTTTAGAAAAATCGGTATTCAATATTCTCTCATTTCCATATTTTCTAAGTTCTGATTATTATCACCCTTTGTTGTATTTGCAGTTCTTCGTTGGTGGAAACTGGAAATGTGTAAGTATCTTCATTATCAATAATCTTATAGCTAAAGGATGTGATGGATAGACGATAGTTATATATGTCGAGGAAAAAAGTTCGAACGTTTGTTGCAAATGGATGCTTTGATTTCTCTTCGAATCATTCTACGTTTCTGTTCTATCCATAATCTCACTAATGTGAAACACAAGTCGTCTTATCACGATCTTTCTAGAACTTACTTTTCTGTTGCAACTTGTGCCAAACATAGAAGAGAATGTAATTGATTTTCATTTATTTTTCTAGTACCATCGTTAATGTCTACTATTAATTGTTACTGAAGCATGTGCAAATCATTTGAAATGGAAGAAGCCTAGAAAAAATATACCATATTCTTGTTTGTCTTTATAACTTCATTTTCATAGGCAAAAAGGGTTTAAGTTCAAACCTGGAGAGCACACAAAGGTTCCGCTGCCACTTCTATATAAGATACCACTTTTAAATTATTTTGATTGTAGTTTTAGAAGCTTAGGAGATCAGGAATCCTTTGTTGTTTACGATTTTTAAGCTCTTAGAAGTGTACTGGACACATTGTAGTACCCAAAATGAAGACACTTATCTGCCTGCTGGTATGGCTTGACTGTCGTCCAAGATGATTGAGCTACTAATATTTCCCATCCTCCTTACTTAGTAAATAAAGAAATTAATTATTTTGAATTTGTGACTGACATATATGGATTCTTACCCTGTTTAATTTATTCCCAGAATGGTACAAAGGAATCAATAACCAAGCTTGTCTCAGATTTGAACAATGTAAAGTTGGAGGATGATGTTGGTAAGTTACGTTTGATGTTGGAGGATGCCTGTTATCACCTTTTAATGTATGTGTTCTTTCATTTAAAAAACAAAAGTTAGGTTTGAGAATACGTTTCCCCCCTCTTGTATTCACTTTGCAAATCAATGTATGAAATTCTTGCTAAAAGAAATCAAAGGTTGCATTTCATATGGGCTTGTTTCTGATTTTATTACATGAAGTGTTTTCCACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTATTATTATTACTTATTCTAAGATCTCTTTCAATTTTATAGTAGGTTGGTATCAAATTATTAATACACCTGAGTTATCGATGAGGATGAATGACATTTTTGTTCTAAATTCTGATAGTCTTTCTCTCCATATTGAAAGCTGGGTTTTCTCCATAATTCTTGTTCTCTTCGCATTCTTATTCTACTCTTCAAGTACATTCTTCTGAAAAAAAGAAATTTGGATATGTTGGGAGGAATGCAGATGTTGTTGTAGCACCTCCATTTCTGTACATTGATCAGGTGAGGAGCTCATTGGCACCTAGGATTGAGATTTCTGCCCAAAACTCATGGGTGAGCAAGGGTGGCGCTTTTACAGGAGAAATCAGGTTATCTGCAATGCCCTTGATGAGACATTTTAGTTTTCGAGAACCCTTCATTCCTTATTTCACTTTCACGATAATCTTATAATCACTTATCTGAGAAGAGAAAACTGCGGAACTCTCTGTAACTTTAGTAATTCCCGTTGACTGCAGATGCTGTTCCAAGTTGGGATGGTATCGTTATCGCATATGAGCCAGTATGGGCCATTGGGACTGGCAAAGTGGCTACTCCCGACCAAGCACAGGAAGTGCATGCAGCAGTTCGCGATTGGCTTAAGAAGAACGTATCACCAGAAGTGGCTTCTAAAACACGGATTATTTATGGAGGTAACTGCCACTTTCATTGTTCTACTGTCAACTTTCAGCCGCTGTAGAAATAAGTTTGCTTGCCTGAACCTTTATCAACAAGTCCATGTTTCGTAAGACTGCCACTGTGAATAACAATCAGACTGGGTCACGTGTCTAAGGAATGATATTATTATTGTTAGGATCTGTGAATGGAGGTAATTGTGCTGAGCTTGCTAAAAAAGAGGACATAGATGGATTTCTAGTGGGAGGCGCTTCGTTGAAGGTGCATTTCTTCCTCTCCCCTTATGTTTTTCTAACGTTTCTGTCAAACCATAGAAGAAAAAGTTTGGCGAACCATACTCAAAGTCCCATCTCAAATCTGTTTCATGTTGCAATTGCAGGGTCCTGAATTTGGAACAATCGTTAATTCCGTTACCGCCAAGAAAGTCGCTGCTTGA ATGGCGGTGGTGTCTACTTCTCTCGCATCTCAGCTCTCAGCTATCAGATTGTCCACTTCCAAGTCCGACATTTCTCAGACTCTGTTTCAGAACGTCCACTCACAAATCCGCCTTGCATCCTCCCGGAAAGGTCCCCGTGGTGTTGTCACCATGGCCGGTTCCGGCAAGTTCTTCGTTGGTGGAAACTGGAAATGTAATGGTACAAAGGAATCAATAACCAAGCTTGTCTCAGATTTGAACAATGTAAAGTTGGAGGATGATGTTGATGTTGTTGTAGCACCTCCATTTCTGTACATTGATCAGGTGAGGAGCTCATTGGCACCTAGGATTGAGATTTCTGCCCAAAACTCATGGGTGAGCAAGGATGCTGTTCCAAGTTGGGATGGTATCGTTATCGCATATGAGCCAGTATGGGCCATTGGGACTGGCAAAGTGGCTACTCCCGACCAAGCACAGGAAGTGCATGCAGCAGTTCGCGATTGGCTTAAGAAGAACGTATCACCAGAAGTGGCTTCTAAAACACGGATTATTTATGGAGGATCTGTGAATGGAGGTAATTGTGCTGAGCTTGCTAAAAAAGAGGACATAGATGGATTTCTAGTGGGAGGCGCTTCGTTGAAGGGTCCTGAATTTGGAACAATCGTTAATTCCGTTACCGCCAAGAAAGTCGCTGCTTGA ATGGCGGTGGTGTCTACTTCTCTCGCATCTCAGCTCTCAGCTATCAGATTGTCCACTTCCAAGTCCGACATTTCTCAGACTCTGTTTCAGAACGTCCACTCACAAATCCGCCTTGCATCCTCCCGGAAAGGTCCCCGTGGTGTTGTCACCATGGCCGGTTCCGGCAAGTTCTTCGTTGGTGGAAACTGGAAATGTAATGGTACAAAGGAATCAATAACCAAGCTTGTCTCAGATTTGAACAATGTAAAGTTGGAGGATGATGTTGATGTTGTTGTAGCACCTCCATTTCTGTACATTGATCAGGTGAGGAGCTCATTGGCACCTAGGATTGAGATTTCTGCCCAAAACTCATGGGTGAGCAAGGATGCTGTTCCAAGTTGGGATGGTATCGTTATCGCATATGAGCCAGTATGGGCCATTGGGACTGGCAAAGTGGCTACTCCCGACCAAGCACAGGAAGTGCATGCAGCAGTTCGCGATTGGCTTAAGAAGAACGTATCACCAGAAGTGGCTTCTAAAACACGGATTATTTATGGAGGATCTGTGAATGGAGGTAATTGTGCTGAGCTTGCTAAAAAAGAGGACATAGATGGATTTCTAGTGGGAGGCGCTTCGTTGAAGGGTCCTGAATTTGGAACAATCGTTAATTCCGTTACCGCCAAGAAAGTCGCTGCTTGA MAVVSTSLASQLSAIRLSTSKSDISQTLFQNVHSQIRLASSRKGPRGVVTMAGSGKFFVGGNWKCNGTKESITKLVSDLNNVKLEDDVDVVVAPPFLYIDQVRSSLAPRIEISAQNSWVSKDAVPSWDGIVIAYEPVWAIGTGKVATPDQAQEVHAAVRDWLKKNVSPEVASKTRIIYGGSVNGGNCAELAKKEDIDGFLVGGASLKGPEFGTIVNSVTAKKVAA Homology
BLAST of Csor.00g229760 vs. ExPASy Swiss-Prot
Match: P48496 (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=TPIP1 PE=1 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.2e-84 Identity = 185/322 (57.45%), Postives = 202/322 (62.73%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy Swiss-Prot
Match: Q9M4S8 (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa OX=3747 GN=TPI PE=2 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 5.9e-78 Identity = 176/317 (55.52%), Postives = 195/317 (61.51%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy Swiss-Prot
Match: Q9SKP6 (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIM PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 6.5e-77 Identity = 169/315 (53.65%), Postives = 188/315 (59.68%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy Swiss-Prot
Match: P46225 (Triosephosphate isomerase, chloroplastic OS=Secale cereale OX=4550 PE=1 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 5.5e-68 Identity = 142/259 (54.83%), Postives = 156/259 (60.23%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy Swiss-Prot
Match: P48497 (Triosephosphate isomerase, cytosolic OS=Stellaria longipes OX=19744 GN=TPI PE=2 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.0e-53 Identity = 117/254 (46.06%), Postives = 138/254 (54.33%), Query Frame = 0
BLAST of Csor.00g229760 vs. NCBI nr
Match: KAG6571040.1 (Triosephosphate isomerase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 433 bits (1114), Expect = 6.78e-153 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of Csor.00g229760 vs. NCBI nr
Match: XP_023512787.1 (triosephosphate isomerase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397 bits (1019), Expect = 3.63e-137 Identity = 224/306 (73.20%), Postives = 225/306 (73.53%), Query Frame = 0
BLAST of Csor.00g229760 vs. NCBI nr
Match: XP_022987010.1 (triosephosphate isomerase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 394 bits (1011), Expect = 6.00e-136 Identity = 223/306 (72.88%), Postives = 224/306 (73.20%), Query Frame = 0
BLAST of Csor.00g229760 vs. NCBI nr
Match: XP_022944549.1 (triosephosphate isomerase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 393 bits (1010), Expect = 8.51e-136 Identity = 223/306 (72.88%), Postives = 224/306 (73.20%), Query Frame = 0
BLAST of Csor.00g229760 vs. NCBI nr
Match: XP_022146193.1 (triosephosphate isomerase, chloroplastic [Momordica charantia]) HSP 1 Score: 374 bits (959), Expect = 4.91e-128 Identity = 209/306 (68.30%), Postives = 217/306 (70.92%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy TrEMBL
Match: A0A6J1JFM2 (triosephosphate isomerase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484585 PE=3 SV=1) HSP 1 Score: 394 bits (1011), Expect = 2.90e-136 Identity = 223/306 (72.88%), Postives = 224/306 (73.20%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy TrEMBL
Match: A0A6J1FWW5 (triosephosphate isomerase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448968 PE=3 SV=1) HSP 1 Score: 393 bits (1010), Expect = 4.12e-136 Identity = 223/306 (72.88%), Postives = 224/306 (73.20%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy TrEMBL
Match: A0A6J1CXY1 (triosephosphate isomerase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015469 PE=3 SV=1) HSP 1 Score: 374 bits (959), Expect = 2.38e-128 Identity = 209/306 (68.30%), Postives = 217/306 (70.92%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy TrEMBL
Match: A0A6J1G6X6 (triosephosphate isomerase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111451334 PE=3 SV=1) HSP 1 Score: 369 bits (948), Expect = 1.12e-126 Identity = 210/306 (68.63%), Postives = 217/306 (70.92%), Query Frame = 0
BLAST of Csor.00g229760 vs. ExPASy TrEMBL
Match: A0A6J1L7Y2 (triosephosphate isomerase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111500005 PE=3 SV=1) HSP 1 Score: 368 bits (944), Expect = 4.55e-126 Identity = 209/306 (68.30%), Postives = 216/306 (70.59%), Query Frame = 0
BLAST of Csor.00g229760 vs. TAIR 10
Match: AT2G21170.1 (triosephosphate isomerase ) HSP 1 Score: 288.5 bits (737), Expect = 4.6e-78 Identity = 169/315 (53.65%), Postives = 188/315 (59.68%), Query Frame = 0
BLAST of Csor.00g229760 vs. TAIR 10
Match: AT2G21170.2 (triosephosphate isomerase ) HSP 1 Score: 258.1 bits (658), Expect = 6.7e-69 Identity = 160/315 (50.79%), Postives = 179/315 (56.83%), Query Frame = 0
BLAST of Csor.00g229760 vs. TAIR 10
Match: AT3G55440.1 (triosephosphate isomerase ) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44 Identity = 104/252 (41.27%), Postives = 130/252 (51.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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