Csor.00g222700 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g222700
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionANK_REP_REGION domain-containing protein
LocationCsor_Chr02: 7824531 .. 7827585 (-)
RNA-Seq ExpressionCsor.00g222700
SyntenyCsor.00g222700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTGTTGCCCTCTCTCATTACCATGAAAGAGAGATTGTGAGGATGATCCTCCAGTCCAGATTCTCAAGGATTCTTCTCTTCGGAGTCTCCGGCGGCAGCGCGATGGTGGTGGAAGCGAATCCAGCAGAAGAACAGCGCACCGTGGAAACGATGATGAATGAAATCGAGGCTCTAGTTGATGTGCAATCCTCTAGTTCTGGTTCGTTCATTTTTCCTTTCGTTGTATAGCATCGCCTTGTCTTCATATCAATCTATTGCGATTTTGTTAGTGCGCGTAAGCAAATGCGCATTAAAATACAAGAAACCTATAAAATTCACCTGGTAAATATTCTCAAACTATTCTCAAGAAACGGATGTGTGTATAGACTGCATTGTATCTGTTTCGGTCTCTTTCAGAATTTATTCAATATCTGCGGTTAGATGAAGCTTTTGATTTTAGTTATAACTTGTTGATTTCTAGGAATTTTGAATGTCTTATAATCGACGGCATAATAAACACTCTGCTGAACTAGGTGTCTTGGTAAGAGTATTCATTCTCCAGTTTCAAGTTATTGCAAGGTCATGTTATGAAATGAACACATTCATTCCGATTTAGGCCAATGAAATGTATGAATAATAATAACTAGAATTCTGTCAAGAATTTGGACAGAATCCGCCTATTAAATGAATTAGTGTAACGAGTACATTGTACTTAGAAAATTGATAAAAGAAAACAGTTAGAACGGAGTAGTTTGGATGAAGATGTTTATGAGTGGAAGGGTTCGGTAACGAAAGGAGCATACATTACTTTGAATTTTTGATATCGCTTGGCAGGCTTCTAGGTGGTGAAGAAGTTTATTTTGGCAGGAGCAAATGAGAGCCTATTGAACAGGTACGTTGTGTCGTTTTTATTATCACATTAACTAGGAGGATCAAATTCAAACCTTATTCAATGATCTTTCTTGGTTGAAAATTGTCCTGAACGCTATATTTGTCTTTATAGCCACGATAGAAGTCCAATAGATAAAGGTCTGAGTGAGGGGAACATGGACGTCGTCGATGCGATCAACGCGGCTGTGGCGCAACTCGAGCTAACTGGTATCTATGTTTACGATGGTGGAAATTTATTTATTTTTTAATTCAAATCGTTCCTTTAGGTAAGGACTGTTTACATTAAAGTAAATAAAGAATTATATTAATCAATGCTACAAGAGCTTGAAAAAAGCTAATTAGAATATATGCTAGTGAATAAGGTGTCAACACTATACCCAAGTTAGATTCTTTTAATAACCAAGTATTGTACTTTGTTTTTTGTTTTCAAATTGTAACTTATAAACACTAAATGTATTTGCTAAGAGTGTTGAAAAATATATTGTAAGTTTAGTTATATCAAACTTTTTGTAAGAATAGTTAACCAACTTTTTTGGGAAAAAAAAAATTAAATGATAATTTAAAAAATTGAAGACCAAATTTAGAAAATGTCGAAAACTAGTATCAACCACTTTTATATTTAGTTCAAATATACAGTTATAACAAAAAAACAATAAAAGAAAAAATAAGTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGTTTTGTTTCCAGATACATGGGAGATTTTACGTTCCAGTAGAATAGAAACACGTTTTAAATACATCTTTAAAAAGGTATACAATTTGGAATGCCTTTTAGTTTTAGTTTAAACACTTAAAAAATAATAATAATAATTCTAAATAGTTAATTTATTTGATTTTAATATATTCAAACCTATTAAATATACAATTATTTCTTTATCATATATCTTGTTTTTTTTTATAATTCATGAGTGTTTTTTTTTTCTTAAAAAAAAAAGAGTTTTTAAACTAATCCAATCTTTTTAAATCATTTTAAAAAAATACATCTTTAATCAAATAAAAAAAAACGGTACGTTAAACAACCTTTAAATTATTAATTTTTTCACAACTTATTTCAAACGCCATAAGTATCGATATGACCATAGGATACTAATATTAAAAAGAAAAGTGTGGTTAAAAGATCAATTGAGTTCTTTTACTTTTGGTTTATGCTATTTTGATATTTTTACATCTTCAAGCTTACAATAATTTTTAAAATTAGGTTCAATTGTTAGTTTCAAGAAAATAATAATAATTATGTTAGAAGAGATATATCGTAAATATATTTTCTAACATAGTTTATATGCAAAAGACTAAGACTAATTTTTTCTAGAAAAGTTGAAAATAAACAAACAATATAAAATAAAATTTAAGTTTTATTGCAAGTACAAACATTAAATCTAGACTAAATAGTATTAAGAGTAAAATAGTATTTAAAAAATTAAAGATTTAGGAAGGTTCAAAAGAAGAGAACGAATTTGAATGATCACCAATGCAAAGTATGAACTGAAAATTCCAGCTACCAAAACATCATTGATTGATTTTTTTTTCTTTGTTTGTGAGGTTGAAGATTTAATTCTCAAGCACGCATTTGTAGAACTTTAAATGAATGCATGAAGTTTTCCAAATATGAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGGTGGCAGTGTGCAGGCTATGAATTAAAGTGAGGCAAGCAGCGAAGATTCTCCTGCTCAAAGCCAGATTTGATAGCATTGCAAAAGACGAAACCGAAGAAACAAACAAATTTTAGGGTATTAGGCAGAGAGATGCACATCGACTCCTACTTTACTCAACTTAACCTCCAAAAAATGTGTGCCTTACGCCTGCCCTCCTTTCATGCCTAGGCTTTCGCACTCATTCACTCAAACTAACTTTTCCTTTTCGAATCCGAATTTCGAAGCTACAACCGACAAGTTTCTCCAGTTTTCTTTCTCTAAATTATTGCCCTAGCAGTTCCAAAGCATATACGACGACTCAAACTGATCGATAAAAGTAGTTCCAGAACATACCTGAATGCCTCACCGCTCGCCGGAAAGCAAATGCAAGAGAAACCGTTGTCGTTGCCGTCCGCACGATCAGGCGATGGTTCCGATGGAAATTGA

mRNA sequence

ATGTCTTCTGTTGCCCTCTCTCATTACCATGAAAGAGAGATTGTGAGGATGATCCTCCAGTCCAGATTCTCAAGGATTCTTCTCTTCGGAGTCTCCGGCGGCAGCGCGATGGTGGTGGAAGCGAATCCAGCAGAAGAACAGCGCACCGTGGAAACGATGATGAATGAAATCGAGGCTCTAGTTGATGTGCAATCCTCTAGTTCTGGAGCAAATGAGAGCCTATTGAACAGCCACGATAGAAGTCCAATAGATAAAGGTCTGAGTGAGGGGAACATGGACGTCGTCGATGCGATCAACGCGGCTGTGGCGCAACTCGAGCTAACTGTTCCAAAGCATATACGACGACTCAAACTGATCGATAAAAGTAGTTCCAGAACATACCTGAATGCCTCACCGCTCGCCGGAAAGCAAATGCAAGAGAAACCGTTGTCGTTGCCGTCCGCACGATCAGGCGATGGTTCCGATGGAAATTGA

Coding sequence (CDS)

ATGTCTTCTGTTGCCCTCTCTCATTACCATGAAAGAGAGATTGTGAGGATGATCCTCCAGTCCAGATTCTCAAGGATTCTTCTCTTCGGAGTCTCCGGCGGCAGCGCGATGGTGGTGGAAGCGAATCCAGCAGAAGAACAGCGCACCGTGGAAACGATGATGAATGAAATCGAGGCTCTAGTTGATGTGCAATCCTCTAGTTCTGGAGCAAATGAGAGCCTATTGAACAGCCACGATAGAAGTCCAATAGATAAAGGTCTGAGTGAGGGGAACATGGACGTCGTCGATGCGATCAACGCGGCTGTGGCGCAACTCGAGCTAACTGTTCCAAAGCATATACGACGACTCAAACTGATCGATAAAAGTAGTTCCAGAACATACCTGAATGCCTCACCGCTCGCCGGAAAGCAAATGCAAGAGAAACCGTTGTCGTTGCCGTCCGCACGATCAGGCGATGGTTCCGATGGAAATTGA

Protein sequence

MSSVALSHYHEREIVRMILQSRFSRILLFGVSGGSAMVVEANPAEEQRTVETMMNEIEALVDVQSSSSGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELTVPKHIRRLKLIDKSSSRTYLNASPLAGKQMQEKPLSLPSARSGDGSDGN
Homology
[Close]
BLAST of Csor.00g222700 vs. NCBI nr
Match: KAG6605937.1 (hypothetical protein SDJN03_03254, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292 bits (748), Expect = 2.45e-99
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MSSVALSHYHEREIVRMILQSRFSRILLFGVSGGSAMVVEANPAEEQRTVETMMNEIEAL 60
           MSSVALSHYHEREIVRMILQSRFSRILLFGVSGGSAMVVEANPAEEQRTVETMMNEIEAL
Sbjct: 1   MSSVALSHYHEREIVRMILQSRFSRILLFGVSGGSAMVVEANPAEEQRTVETMMNEIEAL 60

Query: 61  VDVQSSSSGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELTVPKHIRRLKLID 120
           VDVQSSSSGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELTVPKHIRRLKLID
Sbjct: 61  VDVQSSSSGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELTVPKHIRRLKLID 120

Query: 121 KSSSRTYLNASPLAGKQMQEKPLSLPSARSGDGSDGN 157
           KSSSRTYLNASPLAGKQMQEKPLSLPSARSGDGSDGN
Sbjct: 121 KSSSRTYLNASPLAGKQMQEKPLSLPSARSGDGSDGN 157

[Close]
BLAST of Csor.00g222700 vs. NCBI nr
Match: XP_010673752.1 (PREDICTED: ankyrin repeat-containing protein P16F5.05c [Beta vulgaris subsp. vulgaris] >KMT14594.1 hypothetical protein BVRB_4g073640 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 61.2 bits (147), Expect = 1.98e-08
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 0 

Query: 69  GANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           GAN S+LN+HDR+PID+ LS+G MDV DAINAAVAQ+ELT
Sbjct: 107 GANVSILNNHDRTPIDEALSKGKMDVFDAINAAVAQVELT 146

[Close]
BLAST of Csor.00g222700 vs. NCBI nr
Match: MBA0732561.1 (hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 59.7 bits (143), Expect = 2.25e-08
Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 67  SSGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           S+GAN SLLNSH+R+PID+ +S G MDV+DAINA +A+LELT
Sbjct: 49  SAGANVSLLNSHERTPIDEAVSMGKMDVIDAINATMAELELT 90

[Close]
BLAST of Csor.00g222700 vs. NCBI nr
Match: XP_010045055.1 (ankyrin repeat-containing protein P16F5.05c [Eucalyptus grandis] >KCW87216.1 hypothetical protein EUGRSUZ_B03730 [Eucalyptus grandis])

HSP 1 Score: 60.8 bits (146), Expect = 2.83e-08
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 69  GANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           GAN SLLNSH+R+PID+ +S G +DVVDAINAA AQLELT
Sbjct: 108 GANASLLNSHERTPIDEAVSRGKLDVVDAINAAAAQLELT 147

[Close]
BLAST of Csor.00g222700 vs. NCBI nr
Match: XP_039003185.1 (ankyrin repeat-containing protein P16F5.05c-like [Hibiscus syriacus] >KAE8733112.1 C2 domain-containing family protein [Hibiscus syriacus])

HSP 1 Score: 60.5 bits (145), Expect = 3.81e-08
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 68  SGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           SGAN SLLNSH+R+PID+ LS G MDV+DAINA +A+LELT
Sbjct: 105 SGANVSLLNSHERTPIDEALSMGKMDVIDAINATMAELELT 145

[Close]
BLAST of Csor.00g222700 vs. ExPASy TrEMBL
Match: A0A7J9B896 (ANK_REP_REGION domain-containing protein OS=Gossypium gossypioides OX=34282 GN=Gogos_016641 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.09e-08
Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 67  SSGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           S+GAN SLLNSH+R+PID+ +S G MDV+DAINA +A+LELT
Sbjct: 49  SAGANVSLLNSHERTPIDEAVSMGKMDVIDAINATMAELELT 90

[Close]
BLAST of Csor.00g222700 vs. ExPASy TrEMBL
Match: A0A059D9W3 (ANK_REP_REGION domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03730 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.37e-08
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 69  GANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           GAN SLLNSH+R+PID+ +S G +DVVDAINAA AQLELT
Sbjct: 108 GANASLLNSHERTPIDEAVSRGKLDVVDAINAAAAQLELT 147

[Close]
BLAST of Csor.00g222700 vs. ExPASy TrEMBL
Match: A0A6A3D0W2 (C2 domain-containing family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001644pilonHSYRG00694 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.85e-08
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 68  SGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           SGAN SLLNSH+R+PID+ LS G MDV+DAINA +A+LELT
Sbjct: 105 SGANVSLLNSHERTPIDEALSMGKMDVIDAINATMAELELT 145

[Close]
BLAST of Csor.00g222700 vs. ExPASy TrEMBL
Match: A0A6A2ZG67 (C2 domain-containing family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110893pilonHSYRG00921 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.61e-08
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 0 

Query: 68  SGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           SGAN SLLNSH+R+PID+ LS G MDV+DAINA + +LELT
Sbjct: 105 SGANVSLLNSHERTPIDEALSMGKMDVIDAINATIVELELT 145

[Close]
BLAST of Csor.00g222700 vs. ExPASy TrEMBL
Match: A0A0B0MPJ1 (Histone-lysine N-methyltransferase EHMT1 OS=Gossypium arboreum OX=29729 GN=LOC108477508 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.75e-08
Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 67  SSGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLELT 108
           S+GAN SLLNSH+R+PID+ +S G MDV+DAINA +A+LELT
Sbjct: 106 SAGANVSLLNSHERTPIDEAVSVGKMDVIDAINATMAELELT 147

[Close]
BLAST of Csor.00g222700 vs. TAIR 10
Match: AT5G12320.1 (ankyrin repeat family protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 68  SGANESLLNSHDRSPIDKGLSEGNMDVVDAINAAVAQLEL 108
           +GA+ SLLN ++R+P+D+ +    M+++DAIN  VAQ+EL
Sbjct: 99  AGASLSLLNRYERTPMDEAIGAEKMEIIDAINTTVAQMEL 138

The following BLAST results are available for this feature:
BLAST of Csor.00g222700 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g222700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605937.12.45e-99100.00hypothetical protein SDJN03_03254, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_010673752.11.98e-0875.00PREDICTED: ankyrin repeat-containing protein P16F5.05c [Beta vulgaris subsp. vul... [more]
MBA0732561.12.25e-0869.05hypothetical protein [Gossypium gossypioides][more]
XP_010045055.12.83e-0875.00ankyrin repeat-containing protein P16F5.05c [Eucalyptus grandis] >KCW87216.1 hyp... [more]
XP_039003185.13.81e-0873.17ankyrin repeat-containing protein P16F5.05c-like [Hibiscus syriacus] >KAE8733112... [more]
BLAST of Csor.00g222700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J9B8961.09e-0869.05ANK_REP_REGION domain-containing protein OS=Gossypium gossypioides OX=34282 GN=G... [more]
A0A059D9W31.37e-0875.00ANK_REP_REGION domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRS... [more]
A0A6A3D0W21.85e-0873.17C2 domain-containing family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... [more]
A0A6A2ZG673.61e-0870.73C2 domain-containing family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0... [more]
A0A0B0MPJ13.75e-0869.05Histone-lysine N-methyltransferase EHMT1 OS=Gossypium arboreum OX=29729 GN=LOC10... [more]
BLAST of Csor.00g222700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G12320.11.1e-0447.50ankyrin repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g222700.m01Csor.00g222700.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008168 methyltransferase activity