Csor.00g222040 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGAGAGTTCAAGCACTTGGTGCTCGTGAAGTTTAAGGAAGGAGCGGCGGTGGGAGAGATTCTCAAAGGTATGGAGAACCTCGTCACCGAAATCGAAGCTGTCAAATCCTTTGAATGGTAATCCTCGCCCCTCTTGTTAAAATATAAAAAAGGCATTGGTTCTTCAGTTTTGTTGGATGTCTTTTAGCAGGGTGTGAACCCGAGAGAGGAGCTGAGTCTAAAGAGGGGCCAGTGGCGCCTCTAAGTTCGTCTTAGATATTAGGGAGTAAAACATTGTCCTTCCCCCATAAAACTATCTACCTCCACCCTCGTTAGAACCAAGATTTAAGTATTACTTCTTTTCTTTACTGGTTTCGTAGCTGGATTAAGATATTTTTATGGTAGGGATGGACATTCTTAGGACATGATGTTGAATGTTTAATTAGTTAAAGTTTTATGCAATTTTGTGATAATTATTTAAATTTAGTTTAAAGGGTATGTTAAAAATTAATAAAAGGGTAAACATAATTTCATCATATAACTTAATCATGAAACGAAGAGAAAGATGAATGTTTCAAGGTGGAAACAGGGGGCAGGAGATGGAAGGACCAGAGATGCTTACACAGGGATTCACACATGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCACTCTGCGTTTACTGCGCATCCCAAGCATGTTGAGTTCTCTGCAACTTTCTCGGCAGCCATTGAAAAGATTGTGCTTCTTGATTTTCCAGCTATTCGTGCCAAGCCACCTCCATCCGCTTGA ATGGAAGGAGAGTTCAAGCACTTGGTGCTCGTGAAGTTTAAGGAAGGAGCGGCGGTGGGAGAGATTCTCAAAGGTATGGAGAACCTCGTCACCGAAATCGAAGCTGTCAAATCCTTTGAATGGGGGCAGGAGATGGAAGGACCAGAGATGCTTACACAGGGATTCACACATGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCACTCTGCGTTTACTGCGCATCCCAAGCATGTTGAGTTCTCTGCAACTTTCTCGGCAGCCATTGAAAAGATTGTGCTTCTTGATTTTCCAGCTATTCGTGCCAAGCCACCTCCATCCGCTTGA ATGGAAGGAGAGTTCAAGCACTTGGTGCTCGTGAAGTTTAAGGAAGGAGCGGCGGTGGGAGAGATTCTCAAAGGTATGGAGAACCTCGTCACCGAAATCGAAGCTGTCAAATCCTTTGAATGGGGGCAGGAGATGGAAGGACCAGAGATGCTTACACAGGGATTCACACATGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCACTCTGCGTTTACTGCGCATCCCAAGCATGTTGAGTTCTCTGCAACTTTCTCGGCAGCCATTGAAAAGATTGTGCTTCTTGATTTTCCAGCTATTCGTGCCAAGCCACCTCCATCCGCTTGA MEGEFKHLVLVKFKEGAAVGEILKGMENLVTEIEAVKSFEWGQEMEGPEMLTQGFTHAFLMTFENKEAHSAFTAHPKHVEFSATFSAAIEKIVLLDFPAIRAKPPPSA Homology
BLAST of Csor.00g222040 vs. ExPASy Swiss-Prot
Match: Q9FK81 (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana OX=3702 GN=At5g22580 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32 Identity = 67/99 (67.68%), Postives = 80/99 (80.81%), Query Frame = 0
BLAST of Csor.00g222040 vs. ExPASy Swiss-Prot
Match: Q9LUV2 (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.6e-17 Identity = 42/99 (42.42%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Csor.00g222040 vs. ExPASy Swiss-Prot
Match: I6WU39 (Olivetolic acid cyclase OS=Cannabis sativa OX=3483 GN=OAC PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07 Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Csor.00g222040 vs. NCBI nr
Match: XP_022958177.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata] >KAG6606003.1 Stress-response A/B barrel domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 216 bits (549), Expect = 1.43e-70 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Csor.00g222040 vs. NCBI nr
Match: XP_022995999.1 (stress-response A/B barrel domain-containing protein At5g22580 [Cucurbita maxima] >XP_023533464.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214 bits (546), Expect = 4.12e-70 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Csor.00g222040 vs. NCBI nr
Match: KAG7035953.1 (Stress-response A/B barrel domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214 bits (545), Expect = 5.85e-70 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Csor.00g222040 vs. NCBI nr
Match: XP_022986047.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita maxima]) HSP 1 Score: 196 bits (498), Expect = 8.65e-63 Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of Csor.00g222040 vs. NCBI nr
Match: XP_022943456.1 (stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata] >XP_023512321.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita pepo subsp. pepo] >KAG6570499.1 Stress-response A/B barrel domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010360.1 Stress-response A/B barrel domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 195 bits (495), Expect = 2.48e-62 Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of Csor.00g222040 vs. ExPASy TrEMBL
Match: A0A6J1H156 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita moschata OX=3662 GN=LOC111459481 PE=4 SV=1) HSP 1 Score: 216 bits (549), Expect = 6.95e-71 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Csor.00g222040 vs. ExPASy TrEMBL
Match: A0A6J1K7H9 (stress-response A/B barrel domain-containing protein At5g22580 OS=Cucurbita maxima OX=3661 GN=LOC111491341 PE=4 SV=1) HSP 1 Score: 214 bits (546), Expect = 1.99e-70 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Csor.00g222040 vs. ExPASy TrEMBL
Match: A0A6J1J6I1 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita maxima OX=3661 GN=LOC111483903 PE=4 SV=1) HSP 1 Score: 196 bits (498), Expect = 4.19e-63 Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of Csor.00g222040 vs. ExPASy TrEMBL
Match: A0A6J1FRR7 (stress-response A/B barrel domain-containing protein At5g22580-like OS=Cucurbita moschata OX=3662 GN=LOC111448216 PE=4 SV=1) HSP 1 Score: 195 bits (495), Expect = 1.20e-62 Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of Csor.00g222040 vs. ExPASy TrEMBL
Match: A0A6J1CG30 (stress-response A/B barrel domain-containing protein At5g22580 OS=Momordica charantia OX=3673 GN=LOC111011199 PE=4 SV=1) HSP 1 Score: 194 bits (492), Expect = 3.45e-62 Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 0
BLAST of Csor.00g222040 vs. TAIR 10
Match: AT5G22580.1 (Stress responsive A/B Barrel Domain ) HSP 1 Score: 140.6 bits (353), Expect = 7.5e-34 Identity = 67/99 (67.68%), Postives = 80/99 (80.81%), Query Frame = 0
BLAST of Csor.00g222040 vs. TAIR 10
Match: AT3G17210.1 (heat stable protein 1 ) HSP 1 Score: 89.0 bits (219), Expect = 2.6e-18 Identity = 42/99 (42.42%), Postives = 68/99 (68.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|