Csor.00g212640 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g212640
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like
LocationCsor_Chr17: 5858242 .. 5859378 (-)
RNA-Seq ExpressionCsor.00g212640
SyntenyCsor.00g212640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATAGCTTGTCAACCCCATCCACTGGTTTACTTCTCTATCAGGTCTCTCTCTTCTCTCCCTTGTGCGCGAAACTTCTTATTGTTATTTTCACTTCTAAATCGAAATTTGAATCTGAAATGCAGAAGCAGCTCTAAAAGACAAGATGAATGGAAGAACGTACAGAATTTGCATTCAAGAAGCTTAGTTAAACCTGTATTTTTGGAACCTCAGACTCATAAATTTGCTAGGCCACTGTGCAAAAACAGATTGTATGCAATCCCACATGAAGAAGATGGGCGCCCTTCTGCCTCGATGCCAGAGGACGTTAATTCGAAACCAATGCTTAATTCTATAGCAGAGGAGTTGGGGAATAAATGGTCGCCTCCAAGATATCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTCATTATGAGGACTTTAAAGGGTAAAATCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTTTGTCTTCTAACATCTGCATTTGTTGGCATGGCTTTTTCTATCCAATTTGTCAGAGAATTTACTCGGTTAGGATTAAACAGGTCTGTTGGTGGTGTACTAGCTCTGGCATTCTCAAGGGAGCTAAGTCCCGTGATTACGTCAATTGTGGTTGCAGGGAGAATTGGAAGTTCATACGCTGCAGAATTAGGAACAATGCAAGTCTCAGAGCAAACCGACACGTTAAGAATCTTGGGTTCAAACCCTGTCGATTATCTCGTCACTCCAAGAGTTATAGCCTCCTGCATTGCTCTTCCGATTCTAACTTTAATGTGTTTCACAGTTGGGATGGCATCAAGTGCTCTTTTGGCTGACAGTGTTTATGGTATTAGTATCAACATTATCATTGACTCAGCTCTAAGAGCTCTAAAATCGTGGGATATAATCAGCGCGATGATCAAATCGCAGGTTTTCGGTGCTATCATATCAATTGTAAGCTGTGCTTGGGGTATCACTACTTCCGGGGGTGCTAAGGGGGTTGGGGAGTCCACAACTTCAGCCGTTGTCATCTCTCTTGTGGGCATATTCATTGCTGATTTCACCCTTTCTTGTTTCTTCTTCCAAGGAGCTGGAGATTCCCTCAAGAACTGTATGTAA

mRNA sequence

ATGCAAATAGCTTGTCAACCCCATCCACTGGTTTACTTCTCTATCAGAAGCAGCTCTAAAAGACAAGATGAATGGAAGAACGTACAGAATTTGCATTCAAGAAGCTTAGTTAAACCTGTATTTTTGGAACCTCAGACTCATAAATTTGCTAGGCCACTGTGCAAAAACAGATTGTATGCAATCCCACATGAAGAAGATGGGCGCCCTTCTGCCTCGATGCCAGAGGACGTTAATTCGAAACCAATGCTTAATTCTATAGCAGAGGAGTTGGGGAATAAATGGTCGCCTCCAAGATATCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTCATTATGAGGACTTTAAAGGGTAAAATCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTCTGTTGGTGGTGTACTAGCTCTGGCATTCTCAAGGGAGCTAAGTCCCGTGATTACGTCAATTGTGGTTGCAGGGAGAATTGGAAGTTCATACGCTGCAGAATTAGGAACAATGCAATTGGGATGGCATCAAGTGCTCTTTTGGCTGACAGTGTTTATGGTATTAGTATCAACATTATCATTGACTCAGCTCTAAGAGCTCTAAAATCGTGGGATATAATCAGCGCGATGATCAAATCGCAGGTTTTCGGTGCTATCATATCAATTGTAAGCTGTGCTTGGGGTATCACTACTTCCGGGGGTGCTAAGGGGGTTGGGGAGTCCACAACTTCAGCCGTTGTCATCTCTCTTGTGGGCATATTCATTGCTGATTTCACCCTTTCTTGTTTCTTCTTCCAAGGAGCTGGAGATTCCCTCAAGAACTGTATGTAA

Coding sequence (CDS)

ATGCAAATAGCTTGTCAACCCCATCCACTGGTTTACTTCTCTATCAGAAGCAGCTCTAAAAGACAAGATGAATGGAAGAACGTACAGAATTTGCATTCAAGAAGCTTAGTTAAACCTGTATTTTTGGAACCTCAGACTCATAAATTTGCTAGGCCACTGTGCAAAAACAGATTGTATGCAATCCCACATGAAGAAGATGGGCGCCCTTCTGCCTCGATGCCAGAGGACGTTAATTCGAAACCAATGCTTAATTCTATAGCAGAGGAGTTGGGGAATAAATGGTCGCCTCCAAGATATCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTCATTATGAGGACTTTAAAGGGTAAAATCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTCTGTTGGTGGTGTACTAGCTCTGGCATTCTCAAGGGAGCTAAGTCCCGTGATTACGTCAATTGTGGTTGCAGGGAGAATTGGAAGTTCATACGCTGCAGAATTAGGAACAATGCAATTGGGATGGCATCAAGTGCTCTTTTGGCTGACAGTGTTTATGGTATTAGTATCAACATTATCATTGACTCAGCTCTAAGAGCTCTAAAATCGTGGGATATAATCAGCGCGATGATCAAATCGCAGGTTTTCGGTGCTATCATATCAATTGTAAGCTGTGCTTGGGGTATCACTACTTCCGGGGGTGCTAAGGGGGTTGGGGAGTCCACAACTTCAGCCGTTGTCATCTCTCTTGTGGGCATATTCATTGCTGATTTCACCCTTTCTTGTTTCTTCTTCCAAGGAGCTGGAGATTCCCTCAAGAACTGTATGTAA

Protein sequence

MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCWWCTSSGILKGAKSRDYVNCGCRENWKFIRCRIRNNAIGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Homology
BLAST of Csor.00g212640 vs. ExPASy Swiss-Prot
Match: Q8L4R0 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD1 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.6e-62
Identity = 147/309 (47.57%), Postives = 183/309 (59.22%), Query Frame = 0

Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCWWCTS--------------- 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVC   ++               
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 --------SGILKGAKSRD-------YVNCG--------------CRENWKFIR------ 224
                    G+L  A SR+        V  G                E    +R      
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 ------------------CRIRNNAIGMASSALLADSVYGISINIIIDSALRALKSWDII 284
                               +    +GMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

BLAST of Csor.00g212640 vs. ExPASy Swiss-Prot
Match: P73009 (Probable ABC transporter permease protein slr1045 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1045 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 79/256 (30.86%), Postives = 121/256 (47.27%), Query Frame = 0

Query: 91  GNKWSPPRYLWRGLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCW------- 150
           G++ S   +  R ++  FLTGQV +  L+G+I+ +NTL+Q+  VGP S+ +         
Sbjct: 5   GSRHSLSLWFQRLVAAFFLTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVG 64

Query: 151 ----------------WCTSSGILKGAKSRDY------VNCGCRENWKF----------- 210
                             T  G+L  + +R+       V    R    F           
Sbjct: 65  MVFTIQVAREFIYYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGTMRVTE 124

Query: 211 ---------------------IRCRIR-------NNAIGMASSALLADSVYGISINIIID 270
                                I C +        +  +GMA   +++ S+Y I+  I ++
Sbjct: 125 QLDALYMLRTDPIDYLVVPRVIACGLMLPILTGLSLFVGMAGGLVISSSLYAINPTIFLN 184

Query: 271 SALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFI 279
           S     + WD+ + + KS VFG II+I+ C+WG+TT+GGAKGVGESTT+AVV SL+ IFI
Sbjct: 185 SVQNFTQLWDVFACLFKSLVFGVIIAIIGCSWGLTTTGGAKGVGESTTTAVVTSLLAIFI 244

BLAST of Csor.00g212640 vs. ExPASy Swiss-Prot
Match: P51393 (Probable ABC transporter permease protein ycf63 OS=Porphyra purpurea OX=2787 GN=ycf63 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.3e-17
Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 0

Query: 182 MASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSGG 241
           +A S  ++  +YGI  +I + SA  AL   D  S + KS  FG II+ +SC WG+T+SGG
Sbjct: 160 IAISIFVSFVMYGIPSSIFLKSAFLALSVSDFFSCLQKSLCFGTIIAFISCQWGLTSSGG 219

Query: 242 AKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSL 280
           AKGVG STTS+VV  L+ IFI DF LS F FQ  G S+
Sbjct: 220 AKGVGNSTTSSVVTILLTIFITDFILSYFMFQSTGSSI 257

BLAST of Csor.00g212640 vs. ExPASy Swiss-Prot
Match: Q1XD94 (Probable ABC transporter permease protein ycf63 OS=Pyropia yezoensis OX=2788 GN=ycf63 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 182 MASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSGG 241
           +A S  +A  +Y I  ++ + SA  AL   D +  + KS  F  II  +SC WG+T++GG
Sbjct: 160 IAISLFVAFVMYDIPSSVFLKSAFNALSISDFLICLEKSMFFAIIIGFISCQWGLTSNGG 219

Query: 242 AKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSL 280
           AKGVG STTS+VV  L  +FI DF LS F FQ  G S+
Sbjct: 220 AKGVGNSTTSSVVTILFTVFITDFVLSYFMFQTTGSSI 257

BLAST of Csor.00g212640 vs. ExPASy Swiss-Prot
Match: Q9ZE51 (Probable ABC transporter permease protein RP096 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP096 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.4e-07
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = 0

Query: 180 IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTS 239
           IG+    L+       +    + S  + L+  D+IS +IK+ VFG IISI+SC  G  + 
Sbjct: 165 IGVMGGYLVGIYKLDFNSTAYLTSTFQYLEPIDVISGLIKATVFGFIISIISCYSGYYSG 224

Query: 240 GGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQ 274
            GAKGVG +TTSAVV S + I I+++ ++  FF+
Sbjct: 225 KGAKGVGRATTSAVVNSSILILISNYLITELFFK 258

BLAST of Csor.00g212640 vs. NCBI nr
Match: KAG6575337.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 578 bits (1489), Expect = 4.02e-208
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTSSGILKGAKSRDYVNCGCRENWKFIRCRIRNNAI 180
           KIHWKNTLQQLERVGPRSVGVCWWCTSSGILKGAKSRDYVNCGCRENWKFIRCRIRNNAI
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCWWCTSSGILKGAKSRDYVNCGCRENWKFIRCRIRNNAI 180

Query: 181 GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSG 240
           GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSG
Sbjct: 181 GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSG 240

Query: 241 GAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 283
           GAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 241 GAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 283

BLAST of Csor.00g212640 vs. NCBI nr
Match: XP_022929897.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022929899.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022929900.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 459 bits (1180), Expect = 5.66e-160
Identity = 255/351 (72.65%), Postives = 261/351 (74.36%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           KIHWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

BLAST of Csor.00g212640 vs. NCBI nr
Match: XP_022992323.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022992324.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022992325.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 451 bits (1160), Expect = 6.25e-157
Identity = 252/351 (71.79%), Postives = 258/351 (73.50%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYFSIRS SKRQDEWKNVQNLHSRS VK VFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSISKRQDEWKNVQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           KIHWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

BLAST of Csor.00g212640 vs. NCBI nr
Match: KAG7013875.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451 bits (1160), Expect = 6.25e-157
Identity = 252/351 (71.79%), Postives = 259/351 (73.79%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIAC PHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVK VFLEPQTHKF+RPLCKNRLYA
Sbjct: 1   MQIACLPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKLVFLEPQTHKFSRPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           KIHWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

BLAST of Csor.00g212640 vs. NCBI nr
Match: XP_023549316.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549318.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 449 bits (1156), Expect = 2.54e-156
Identity = 250/351 (71.23%), Postives = 258/351 (73.50%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYF IRSSSKR+DEWKN+QNLHSRS VK VFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           KIHWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

BLAST of Csor.00g212640 vs. ExPASy TrEMBL
Match: A0A6J1EQ38 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436364 PE=3 SV=1)

HSP 1 Score: 459 bits (1180), Expect = 2.74e-160
Identity = 255/351 (72.65%), Postives = 261/351 (74.36%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           KIHWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

BLAST of Csor.00g212640 vs. ExPASy TrEMBL
Match: A0A6J1JVE0 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488667 PE=3 SV=1)

HSP 1 Score: 451 bits (1160), Expect = 3.02e-157
Identity = 252/351 (71.79%), Postives = 258/351 (73.50%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYFSIRS SKRQDEWKNVQNLHSRS VK VFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSISKRQDEWKNVQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           KIHWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

BLAST of Csor.00g212640 vs. ExPASy TrEMBL
Match: A0A0A0KC25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022380 PE=3 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 3.26e-140
Identity = 228/351 (64.96%), Postives = 247/351 (70.37%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYFS+RS SKRQD W+NVQNLHSR+ VK V LEPQ HKFA  LCKNRL+A
Sbjct: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IP+ EDG PSASM ED+NS P+L+SIA EL NKWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           K+HWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYG+SINII+DSA+RALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300

BLAST of Csor.00g212640 vs. ExPASy TrEMBL
Match: A0A1S3BD54 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488585 PE=3 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 5.36e-139
Identity = 230/351 (65.53%), Postives = 247/351 (70.37%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLV FSIRSSSKRQD WKNVQNLHSR+LVK VFLE Q HKFA  LCKNRL+A
Sbjct: 1   MQIACQPHPLVDFSIRSSSKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IP+ EDG PSASM ED+NS P+L+SIA EL +KWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           K+HWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYG+SINII+DSALRALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

BLAST of Csor.00g212640 vs. ExPASy TrEMBL
Match: A0A5D3D286 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3919G00030 PE=3 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 5.36e-139
Identity = 230/351 (65.53%), Postives = 247/351 (70.37%), Query Frame = 0

Query: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLV FSIRSSSKRQD WKNVQNLHSR+LVK VFLE Q HKFA  LCKNRL+A
Sbjct: 1   MQIACQPHPLVDFSIRSSSKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IP+ EDG PSASM ED+NS P+L+SIA EL +KWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCWWCTS-----------------------SGILKGAKSR 180
           K+HWKNTLQQLERVGPRSVGVC   ++                        G+L  A SR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 DY-------VNCG--------------CRENWKFIRCRIRNNA----------------- 240
           +        V  G                E    +R    N                   
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 -------IGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 283
                  +GMASSALLADSVYG+SINII+DSALRALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

BLAST of Csor.00g212640 vs. TAIR 10
Match: AT1G19800.2 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-63
Identity = 147/309 (47.57%), Postives = 183/309 (59.22%), Query Frame = 0

Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCWWCTS--------------- 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVC   ++               
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 --------SGILKGAKSRD-------YVNCG--------------CRENWKFIR------ 224
                    G+L  A SR+        V  G                E    +R      
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 ------------------CRIRNNAIGMASSALLADSVYGISINIIIDSALRALKSWDII 284
                               +    +GMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

BLAST of Csor.00g212640 vs. TAIR 10
Match: AT1G19800.3 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-63
Identity = 147/309 (47.57%), Postives = 183/309 (59.22%), Query Frame = 0

Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCWWCTS--------------- 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVC   ++               
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 --------SGILKGAKSRD-------YVNCG--------------CRENWKFIR------ 224
                    G+L  A SR+        V  G                E    +R      
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 ------------------CRIRNNAIGMASSALLADSVYGISINIIIDSALRALKSWDII 284
                               +    +GMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

BLAST of Csor.00g212640 vs. TAIR 10
Match: AT1G19800.1 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 240.4 bits (612), Expect = 1.8e-63
Identity = 147/309 (47.57%), Postives = 183/309 (59.22%), Query Frame = 0

Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCWWCTS--------------- 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVC   ++               
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 --------SGILKGAKSRD-------YVNCG--------------CRENWKFIR------ 224
                    G+L  A SR+        V  G                E    +R      
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 ------------------CRIRNNAIGMASSALLADSVYGISINIIIDSALRALKSWDII 284
                               +    +GMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L4R02.6e-6247.57Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana OX=... [more]
P730091.8e-2330.86Probable ABC transporter permease protein slr1045 OS=Synechocystis sp. (strain P... [more]
P513937.3e-1751.02Probable ABC transporter permease protein ycf63 OS=Porphyra purpurea OX=2787 GN=... [more]
Q1XD941.5e-1445.92Probable ABC transporter permease protein ycf63 OS=Pyropia yezoensis OX=2788 GN=... [more]
Q9ZE512.4e-0739.36Probable ABC transporter permease protein RP096 OS=Rickettsia prowazekii (strain... [more]
Match NameE-valueIdentityDescription
KAG6575337.14.02e-208100.00Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic, partial [Cucurbita argyros... [more]
XP_022929897.15.66e-16072.65protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita ... [more]
XP_022992323.16.25e-15771.79protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita ... [more]
KAG7013875.16.25e-15771.79Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Cucurbita argyrosperma sub... [more]
XP_023549316.12.54e-15671.23protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita ... [more]
Match NameE-valueIdentityDescription
A0A6J1EQ382.74e-16072.65protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbit... [more]
A0A6J1JVE03.02e-15771.79protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbit... [more]
A0A0A0KC253.26e-14064.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022380 PE=3 SV=1[more]
A0A1S3BD545.36e-13965.53protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 OS=Cucumis melo ... [more]
A0A5D3D2865.36e-13965.53Protein TRIGALACTOSYLDIACYLGLYCEROL 1 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
Match NameE-valueIdentityDescription
AT1G19800.21.8e-6347.57trigalactosyldiacylglycerol 1 [more]
AT1G19800.31.8e-6347.57trigalactosyldiacylglycerol 1 [more]
AT1G19800.11.8e-6347.57trigalactosyldiacylglycerol 1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR030802ABC transporter permease MalEPFAMPF02405MlaEcoord: 178..268
e-value: 2.3E-21
score: 76.4
IPR030802ABC transporter permease MalEPANTHERPTHR30188ABC TRANSPORTER PERMEASE PROTEIN-RELATEDcoord: 1..143
coord: 178..283
NoneNo IPR availablePANTHERPTHR30188:SF4PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 1, CHLOROPLASTICcoord: 1..143
coord: 178..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g212640.m01Csor.00g212640.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0043190 ATP-binding cassette (ABC) transporter complex