Csor.00g209350 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g209350
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 8658445 .. 8658885 (-)
RNA-Seq ExpressionCsor.00g209350
SyntenyCsor.00g209350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGCATTGCTAGTGATTACAACATTGATTCAGAAAATGTGCATAGACGATGGAGAATTTTCTGTAGATGTTGTTTGTTCTTTGTTTGATGATAACCAATTTGGATTGGTGATCCCTCTTCTGAAGCTATTGTTATGGAGCCACCACCTTGTTGTTCTGTTTGGGTTGTTGGGTTTCTGGTGCCAAGTCAGTCTTGGTTGGCTGGAGGTTGCTTTTGATACCCTGTGGTTGGTTGGTGCTCTTTCTGCTTTTCAATGGTTGGCTCCTCCTCTGTTTGGTGCCTTTTCTTTGGAGGTTTTGGCATTGTTCATTGGGTATGTTGCCTTGCTCCTTTCCACTTTAATAGATAAATTTTTAAAACAGTTATTCGATCTTCGATCTTCGTTCTTGAAGTGTAATATTGCTTTCGAGTTTCTCCCTTTTTCTACTCCGTGGTAA

mRNA sequence

ATGAGGGCATTGCTAGTGATTACAACATTGATTCAGAAAATGTGCATAGACGATGGAGAATTTTCTGTAGATGTTGTTTGTTCTTTGTTTGATGATAACCAATTTGGATTGGTGATCCCTCTTCTGAAGCTATTGTTATGGAGCCACCACCTTGTTGTTCTGTTTGGGTTGTTGGGTTTCTGGTGCCAAGTCAGTCTTGGTTGGCTGGAGGTTGCTTTTGATACCCTGTGGTTGGTTGGTGCTCTTTCTGCTTTTCAATGGTTGGCTCCTCCTCTGTTTGGTGCCTTTTCTTTGGAGGTTTTGGCATTGTTCATTGGGTATGTTGCCTTGCTCCTTTCCACTTTAATAGATAAATTTTTAAAACAGTTATTCGATCTTCGATCTTCGTTCTTGAAGTGTAATATTGCTTTCGAGTTTCTCCCTTTTTCTACTCCGTGGTAA

Coding sequence (CDS)

ATGAGGGCATTGCTAGTGATTACAACATTGATTCAGAAAATGTGCATAGACGATGGAGAATTTTCTGTAGATGTTGTTTGTTCTTTGTTTGATGATAACCAATTTGGATTGGTGATCCCTCTTCTGAAGCTATTGTTATGGAGCCACCACCTTGTTGTTCTGTTTGGGTTGTTGGGTTTCTGGTGCCAAGTCAGTCTTGGTTGGCTGGAGGTTGCTTTTGATACCCTGTGGTTGGTTGGTGCTCTTTCTGCTTTTCAATGGTTGGCTCCTCCTCTGTTTGGTGCCTTTTCTTTGGAGGTTTTGGCATTGTTCATTGGGTATGTTGCCTTGCTCCTTTCCACTTTAATAGATAAATTTTTAAAACAGTTATTCGATCTTCGATCTTCGTTCTTGAAGTGTAATATTGCTTTCGAGTTTCTCCCTTTTTCTACTCCGTGGTAA

Protein sequence

MRALLVITTLIQKMCIDDGEFSVDVVCSLFDDNQFGLVIPLLKLLLWSHHLVVLFGLLGFWCQVSLGWLEVAFDTLWLVGALSAFQWLAPPLFGAFSLEVLALFIGYVALLLSTLIDKFLKQLFDLRSSFLKCNIAFEFLPFSTPW
Homology
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BLAST of Csor.00g209350 vs. NCBI nr
Match: KAG6599153.1 (hypothetical protein SDJN03_08931, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289 bits (740), Expect = 1.78e-98
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MRALLVITTLIQKMCIDDGEFSVDVVCSLFDDNQFGLVIPLLKLLLWSHHLVVLFGLLGF 60
           MRALLVITTLIQKMCIDDGEFSVDVVCSLFDDNQFGLVIPLLKLLLWSHHLVVLFGLLGF
Sbjct: 1   MRALLVITTLIQKMCIDDGEFSVDVVCSLFDDNQFGLVIPLLKLLLWSHHLVVLFGLLGF 60

Query: 61  WCQVSLGWLEVAFDTLWLVGALSAFQWLAPPLFGAFSLEVLALFIGYVALLLSTLIDKFL 120
           WCQVSLGWLEVAFDTLWLVGALSAFQWLAPPLFGAFSLEVLALFIGYVALLLSTLIDKFL
Sbjct: 61  WCQVSLGWLEVAFDTLWLVGALSAFQWLAPPLFGAFSLEVLALFIGYVALLLSTLIDKFL 120

Query: 121 KQLFDLRSSFLKCNIAFEFLPFSTPW 146
           KQLFDLRSSFLKCNIAFEFLPFSTPW
Sbjct: 121 KQLFDLRSSFLKCNIAFEFLPFSTPW 146

The following BLAST results are available for this feature:
BLAST of Csor.00g209350 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g209350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599153.11.78e-98100.00hypothetical protein SDJN03_08931, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g209350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g209350 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g209350.m01Csor.00g209350.m01mRNA