Csor.00g207600 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAGACCTTGGGTTCTTGTCTGTCTGCTGTTATTGATCGTGTTCTCATCGCAACTTGAGTGGAGGCAACAGTATGAGAACGAACTTGAAGCAGGTCCAAACGCTACACAGAGTGAACCACATGTGTCTGATAGAGAGGAAGCTGTAAAAGAAAAGGTGAAATTCCAGTTATCTATCTCTTTTTTTCCCATAAGTTTGCCAAATCACTCGTATGTGTTCAGCTGTTTACATTTTGTCAATGCTCGAAATGATTAGATGTTCTGTAGTTTATGTAGGAAACATTAGAAGTATTTATCGAATCCTCTGGATTTATAGAACTCCTACACTTGAGATGCATCCAAAAGGTAGGAAAATATTGAGGGTTAGTTAGAGTATATGGAATAGCCCAAACCTGCCGCTAGTAGATATTGTCCACTTAGGCCAATTACGTATCGTCATCAACCTCACGGTTTTCAAACGCGTCTACTAGAGAGACGGTGATACGTAACGGGCTAAAGCGGTAGAATGTCTACTAGCGGTAGGCTTGGGCTGTTGGAAATGATATCATAGCCAGACACTGAGCAATGTGCCAACAAGGACGCTAGGACCCAAGAAGGGTGGATTGTGAGATCCAACATCAGTTGGAGAGGAGAACGAATCATTCCTTATAAGGGTGTGAAAACCTCTTCGTAATAGATGCATTTTAAAACCTTGAGGGGAAACTTGGAAGGGAAAATCTAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTATAGGATGTGTGAGTACGTACTAGTTGTTCCCCAGAATATCTTCTGTGGGGAGCACAATTGCATGGACATGTGAACATTCTAGTATTTTAGAAGTGTGTTTCACTAAAATGATATGCCTAGTTCACCATGGAAAGGAAACCCAAGTCCGACGTTAGCTCAAGAAGATCATAGATATACAAGTAAGAGATAATATCTCCGTTGGTGTGAGATATTTTGTGTGAAACCAAAAGTAATAGGTGAAGGTTCCATTGTTGTGACACTCGAATAAAGGAGGGATACATGAATGAACCGAGACCACATCTGAATGAGAGTGATCCTGAGGATAGGATGACTAAGAAAGGCTTAATGGAAATGAAAGTTACTGCCTACCTTGGTTTCCAGTAGTTTTTTATCTCATCCCGCTTATAACGAACACTGTCTGCAAGCTAGCAATGCTAATGATAGAAATTGAAAATCGTATACTGTTATAATCTCTCGAAGACCCATCGAAACTGAAAGGAAATTAAAAAAAAAAAAACAAATCCACAGAATTTCCATGATCTCCCAATAACCAAACAGATTATGCAATCAAAAACTTAGGAAGCTAAAAACAAAGCAAATTAATCAAGCAATTACCATCTTCTTGCTTTGATGATTGCGTAAGAACTCAATGAACAGAGAAATCAGAGAAGATGTAAACGTTGTTGGAAACAAGGATGAGCTTTCCCTTCCTTTCTTTGAAGTAGGCTTCAAAGAAAAGCCAAACTAGAGAGAAAAACACTTACAGTGGGCGGAGAAAAGTAGCAACAGTGGCAGAGAGAAGTGGTGGAGCGGCGACATGGCAAAGGGCGTCGGTAGTGCAGGCAACAGGATGGTAGTTGCAACAAAGAAAAGGAACATCATGGGTATATGAGTTAGAAATAATATCTTCATCGGACAATATCATACCATTATAGAGATGGGTGAAGATTCCGTTGTCCTTAGCAGTTCACTCGATCCCTCACACATTTCGTTACCAAGGAAGTAGAACTATATCTAACCTGTAACCTCTCCACACCACTAAATCTGAAACACACAAGATTATTTGTTGTTTCTGCTTCTTTTAGAGCTCTTGTTCATCCTTATACTGCTGCGCTTCTTTGACTGATATACAATGTTGTTCCTGGTTTCTATTATGATCTGTTAATATAATGCTAAAATTCTTTGAATACTACTGTAGATTATCCTTTCCCAGGAGAGAAATATCCGGAGATTGAATGAGCTGGTGCAGAGTCTTAGAACACAATTACTCCAGTGCAGGGGCGAACACGAGGCACAGAATAGCATGGTGACGCCCATGACAGAGCTTCTAACAGTGCTCGACCAGCAGCCGTTGTTAGACGATTAG ATGTCCAGACCTTGGGTTCTTGTCTGTCTGCTGTTATTGATCGTGTTCTCATCGCAACTTGAGTGGAGGCAACAGTATGAGAACGAACTTGAAGCAGGTCCAAACGCTACACAGAGTGAACCACATGTGTCTGATAGAGAGGAAGCTGTAAAAGAAAAGATTATCCTTTCCCAGGAGAGAAATATCCGGAGATTGAATGAGCTGGTGCAGAGTCTTAGAACACAATTACTCCAGTGCAGGGGCGAACACGAGGCACAGAATAGCATGGTGACGCCCATGACAGAGCTTCTAACAGTGCTCGACCAGCAGCCGTTGTTAGACGATTAG ATGTCCAGACCTTGGGTTCTTGTCTGTCTGCTGTTATTGATCGTGTTCTCATCGCAACTTGAGTGGAGGCAACAGTATGAGAACGAACTTGAAGCAGGTCCAAACGCTACACAGAGTGAACCACATGTGTCTGATAGAGAGGAAGCTGTAAAAGAAAAGATTATCCTTTCCCAGGAGAGAAATATCCGGAGATTGAATGAGCTGGTGCAGAGTCTTAGAACACAATTACTCCAGTGCAGGGGCGAACACGAGGCACAGAATAGCATGGTGACGCCCATGACAGAGCTTCTAACAGTGCTCGACCAGCAGCCGTTGTTAGACGATTAG MSRPWVLVCLLLLIVFSSQLEWRQQYENELEAGPNATQSEPHVSDREEAVKEKIILSQERNIRRLNELVQSLRTQLLQCRGEHEAQNSMVTPMTELLTVLDQQPLLDD Homology
BLAST of Csor.00g207600 vs. NCBI nr
Match: KAG6596595.1 (hypothetical protein SDJN03_09775, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207 bits (526), Expect = 4.63e-67 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Csor.00g207600 vs. NCBI nr
Match: XP_023005135.1 (uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005136.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005137.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005138.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005139.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005140.1 uncharacterized protein LOC111498265 [Cucurbita maxima] >XP_023005141.1 uncharacterized protein LOC111498265 [Cucurbita maxima]) HSP 1 Score: 204 bits (519), Expect = 5.42e-66 Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Csor.00g207600 vs. NCBI nr
Match: XP_023539012.1 (uncharacterized protein LOC111799771 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023539013.1 uncharacterized protein LOC111799771 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023539014.1 uncharacterized protein LOC111799771 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023539015.1 uncharacterized protein LOC111799771 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023539016.1 uncharacterized protein LOC111799771 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204 bits (519), Expect = 5.42e-66 Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Csor.00g207600 vs. NCBI nr
Match: XP_038906290.1 (uncharacterized protein LOC120092148 [Benincasa hispida] >XP_038906291.1 uncharacterized protein LOC120092148 [Benincasa hispida]) HSP 1 Score: 186 bits (471), Expect = 1.14e-58 Identity = 95/108 (87.96%), Postives = 102/108 (94.44%), Query Frame = 0
BLAST of Csor.00g207600 vs. NCBI nr
Match: XP_011652024.1 (uncharacterized protein LOC101204593 isoform X3 [Cucumis sativus] >XP_031738221.1 uncharacterized protein LOC101204593 isoform X3 [Cucumis sativus] >KAE8651101.1 hypothetical protein Csa_001655 [Cucumis sativus]) HSP 1 Score: 184 bits (466), Expect = 6.57e-58 Identity = 93/108 (86.11%), Postives = 101/108 (93.52%), Query Frame = 0
BLAST of Csor.00g207600 vs. ExPASy TrEMBL
Match: A0A6J1L1D0 (uncharacterized protein LOC111498265 OS=Cucurbita maxima OX=3661 GN=LOC111498265 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 2.62e-66 Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0
BLAST of Csor.00g207600 vs. ExPASy TrEMBL
Match: A0A6J1CT86 (uncharacterized protein LOC111014372 OS=Momordica charantia OX=3673 GN=LOC111014372 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 3.84e-57 Identity = 93/108 (86.11%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Csor.00g207600 vs. ExPASy TrEMBL
Match: A0A5D3DP23 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004310 PE=4 SV=1) HSP 1 Score: 180 bits (456), Expect = 1.07e-56 Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Csor.00g207600 vs. ExPASy TrEMBL
Match: A0A1S3B7I0 (uncharacterized protein LOC103486653 OS=Cucumis melo OX=3656 GN=LOC103486653 PE=4 SV=1) HSP 1 Score: 180 bits (456), Expect = 1.07e-56 Identity = 93/108 (86.11%), Postives = 100/108 (92.59%), Query Frame = 0
BLAST of Csor.00g207600 vs. ExPASy TrEMBL
Match: A0A6J1F1Y7 (uncharacterized protein LOC111441421 OS=Cucurbita moschata OX=3662 GN=LOC111441421 PE=4 SV=1) HSP 1 Score: 174 bits (440), Expect = 3.03e-54 Identity = 90/109 (82.57%), Postives = 101/109 (92.66%), Query Frame = 0
BLAST of Csor.00g207600 vs. TAIR 10
Match: AT3G44280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 101.7 bits (252), Expect = 3.9e-22 Identity = 52/88 (59.09%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of Csor.00g207600 vs. TAIR 10
Match: AT5G22280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19 Identity = 50/91 (54.95%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of Csor.00g207600 vs. TAIR 10
Match: AT5G06265.1 (hyaluronan mediated motility receptor-related ) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-15 Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of Csor.00g207600 vs. TAIR 10
Match: AT5G06265.2 (hyaluronan mediated motility receptor-related ) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-15 Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of Csor.00g207600 vs. TAIR 10
Match: AT5G06265.3 (hyaluronan mediated motility receptor-related ) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-15 Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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