Csor.00g206340 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g206340
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr06: 3263431 .. 3265539 (-)
RNA-Seq ExpressionCsor.00g206340
SyntenyCsor.00g206340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACAAGCCAACCAATGGGGATTAAAGAAAGAAAGAGAGGTTACCGAATACCAGTACAGGCAGTTGGCTTCGTTATTCCCGACGGGTAAAGTTGCCCCGGTGGAACCGGTCATCCGGTGGGCGACTCCGATAAACTGCCAGCTAATTTCTTCTGGCAACCACCGCCCACAGTAATTCATAATCAATCTCCAATCACCCCTTATTCTTCGGCCACGTGTTCAATAGGTTCAGCTGCTACGCCACGTTATGCTCTGTCACTCACTCACGCGCCTACGTGTGTTTCGAGAACCTCACGAGCTTTACGGAAAGCGCTTCTGAAAAGTCTATATTACCCCCGAAATCTACGAGGAAAGTAGCGGAAAAAGGTGGAGAAAATTGGACTTTGCTACGTAAGCATATAACGAACTTATGAAGGTGGGTGGAAACGAATCCTCTGCGGGTGGGCCGTTTCAACTTTCGTAAACACTCACGTGGGATTTTATGCCCTCCTTGTGGGATTACATCTGGACCGTTCAGATTGGATATGTTTGGACGGTGGGGATGGACCCATATGTATATATATATATATTTTTTTTTCTATTTAAATGGCTCATTCATACGGGGGAAAAGAATAAATCCTTTTCTTCTCTCTTTCTTTCATCCGACACAAACTCTTCGATTATACCGCATGTGAATTGACTATTTTACCCTTTATTCAGTTATTTTTATAGTTTTTGGGAATAATTTGTTAAAAATAGAATACTAATGTTTTCTTTCTCAAATAAACATAAATTTGTTCTATCATTTTTTTAATATTTAAAATATTATTAAAATCATTAAAAGTTTTTTTTAGCATTTTTTAAACACGATTAATATTTTTTATTTTATAATCCAAACCATATATTTAAGGTGGCCTTTGATTTCTTTTTAATGTCATAAACTTCATAAATTATAATAAAAATGTTATAATTACTCAACTGTATTTTGATAATAATAAAGTGCTATAATACATGTTTGATTCATGTGTGACTTTTATTTTTATAAATTTTTCTTAATTATCATATCATTATATTATTTTTAATTTAGATATGGTATCAGTTTATTTATATACTTCTGGTTTTTGGTGCTACAATGAAATTTAAAATTTAGAATAAAAATGTAATATTTTGTAATTTATGAACTAATTAAAAATAAAATTCGAAACACAAAGGATAAAAACAGGTAACTTTATCAAAATCTTATAAACAAATGTGACAGTTAAAAAAAAAAAAAAAAATTACGGCACATTTTTACATTTATGTTATCCCAAAAAGATTCCATCTCCAAGGGTGAAAAAAAAAATATTTTTACAAATTTTAAATGTTATTTTCATTGGAGAATAAATAATAATAAAAAATTATGACATAAAATAAAATAAAATAAAATAATATATATAAATTATTTTTTGAAATTAACTATAAATTCAAATTAGTTTTCAACTCATATTAATTTCATAAAACACTAGGAGAGGTACAAAAGAAATTAATAATAAATAAAACAGTCCCGGAGGGGTAAAAAGGTAAAAACATCAACGGTAGGTAACAGAAACTCGGACGGAGAAAAACGCGTTTCGGCTTTTCGGGCGTTTGGTTGAACCACCTAACAACAACTGCTATCCTCAAATATATATTTTTAATAAAAATAAAAATAAAAATAAATAAATAATAAGAAAAGAAAAAAAAAAACTGATTGGGTGGGTTAGTTTTACATTTACTCAATAAAGCGTTTTAATATTCTTGAGGTATAAAAGTATAAATTATCCTGTTCTAGCAACTTTTTTCTGTTTTCTACGCCTTTCGCTCCCTTTTCTCCTCTCTTTTCATTTTCTACTGTTCTCTCCCTCCAGTTTCTCTCTCTCTCGCCGGTGAATCTCCTTTTCCTCTTGCCGGAAAAGTCCTCGACGTCCTCCAACCACCGCCGTCTTCCGCCTTAGAGATTCTCACTTTATTGCCGCTTGCGTGTTCTTGTCGCTTTCCTTCGATTCCACTCCGGAGCCTCTGGATCTCTGAATCTGACTCTCCTTCTTCTGGTTCTTCGCCTCTTTCGAGAATGTGGTCCGCCTCCTCCTCCTTTCGCCCTTGCACTTGA

mRNA sequence

ATGCCACAAGCCAACCAATGGGGATTAAAGAAAGAAAGAGAGGTTACCGAATACCAGTACAGGCAGTTGGCTTCGTTATTCCCGACGGGTAAAGTTGCCCCGGTGGAACCGGTCATCCGGTTCAGCTGCTACGCCACGTTATGCTCTGTCACTCACTCACGCGCCTACGTGTGTTTCGAGAACCTCACGAGCTTTACGGAAAGCGCTTCTGAAAAGTCTATATTACCCCCGAAATCTACGAGGAAAGTAGCGGAAAAAGGTGGAGAAAATTGGACTTTGCTACTTTCTCTCTCTCTCGCCGGTGAATCTCCTTTTCCTCTTGCCGGAAAAGTCCTCGACGTCCTCCAACCACCGCCGTCTTCCGCCTTAGAGATTCTCACTTTATTGCCGCTTGCGTGTTCTTGTCGCTTTCCTTCGATTCCACTCCGGAGCCTCTGGATCTCTGAATCTGACTCTCCTTCTTCTGGTTCTTCGCCTCTTTCGAGAATGTGGTCCGCCTCCTCCTCCTTTCGCCCTTGCACTTGA

Coding sequence (CDS)

ATGCCACAAGCCAACCAATGGGGATTAAAGAAAGAAAGAGAGGTTACCGAATACCAGTACAGGCAGTTGGCTTCGTTATTCCCGACGGGTAAAGTTGCCCCGGTGGAACCGGTCATCCGGTTCAGCTGCTACGCCACGTTATGCTCTGTCACTCACTCACGCGCCTACGTGTGTTTCGAGAACCTCACGAGCTTTACGGAAAGCGCTTCTGAAAAGTCTATATTACCCCCGAAATCTACGAGGAAAGTAGCGGAAAAAGGTGGAGAAAATTGGACTTTGCTACTTTCTCTCTCTCTCGCCGGTGAATCTCCTTTTCCTCTTGCCGGAAAAGTCCTCGACGTCCTCCAACCACCGCCGTCTTCCGCCTTAGAGATTCTCACTTTATTGCCGCTTGCGTGTTCTTGTCGCTTTCCTTCGATTCCACTCCGGAGCCTCTGGATCTCTGAATCTGACTCTCCTTCTTCTGGTTCTTCGCCTCTTTCGAGAATGTGGTCCGCCTCCTCCTCCTTTCGCCCTTGCACTTGA

Protein sequence

MPQANQWGLKKEREVTEYQYRQLASLFPTGKVAPVEPVIRFSCYATLCSVTHSRAYVCFENLTSFTESASEKSILPPKSTRKVAEKGGENWTLLLSLSLAGESPFPLAGKVLDVLQPPPSSALEILTLLPLACSCRFPSIPLRSLWISESDSPSSGSSPLSRMWSASSSFRPCT
Homology
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BLAST of Csor.00g206340 vs. NCBI nr
Match: KAG6596721.1 (hypothetical protein SDJN03_09901, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345 bits (884), Expect = 1.62e-119
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 1   MPQANQWGLKKEREVTEYQYRQLASLFPTGKVAPVEPVIRFSCYATLCSVTHSRAYVCFE 60
           MPQANQWGLKKEREVTEYQYRQLASLFPTGKVAPVEPVIRFSCYATLCSVTHSRAYVCFE
Sbjct: 1   MPQANQWGLKKEREVTEYQYRQLASLFPTGKVAPVEPVIRFSCYATLCSVTHSRAYVCFE 60

Query: 61  NLTSFTESASEKSILPPKSTRKVAEKGGENWTLLLSLSLAGESPFPLAGKVLDVLQPPPS 120
           NLTSFTESASEKSILPPKSTRKVAEKGGENWTLLLSLSLAGESPFPLAGKVLDVLQPPPS
Sbjct: 61  NLTSFTESASEKSILPPKSTRKVAEKGGENWTLLLSLSLAGESPFPLAGKVLDVLQPPPS 120

Query: 121 SALEILTLLPLACSCRFPSIPLRSLWISESDSPSSGSSPLSRMWSASSSFRPCT 174
           SALEILTLLPLACSCRFPSIPLRSLWISESDSPSSGSSPLSRMWSASSSFRPCT
Sbjct: 121 SALEILTLLPLACSCRFPSIPLRSLWISESDSPSSGSSPLSRMWSASSSFRPCT 174

The following BLAST results are available for this feature:
BLAST of Csor.00g206340 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g206340 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6596721.11.62e-119100.00hypothetical protein SDJN03_09901, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g206340 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g206340 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g206340.m01Csor.00g206340.m01mRNA