Csor.00g205960 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g205960
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	nuclear transcription factor Y subunit B-9-like
Location	Csor_Chr06: 3509013 .. 3509666 (+)
RNA-Seq Expression	Csor.00g205960
Synteny	Csor.00g205960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCTAAAGTATTTGGTTTCAGCTTTGAATGAATTGGTAACTGCAAACAAGTCATCCTCTGCCAAAAGCAACCACCAACAATCAAAGAGTAGAAACGTTGCGGCCAAGTCCCCTGTGACTGGCTCTACCCCTGCCTCAATCGCTGCCACCAACAATGAGCAGAGCCAACAATGCATTGTGCGGGAGCAGGACCAATACATGCCAATCGCTAATGTGATACGCATCATGCGACGAATCTTACCGTCTCATGCAAAGATATCTGATGATGCAAAGGAAACCATCCAAGAATGTGTGTCTGAGTATATCAGCTTCATTACTGGTGAGGCCAACGAGCGATGCCAAAGGGAGCAGCGTAAGACAGTGACAGCAGAGGATGTCCTTTGGGCCATGGGGAAGCTAGGGTTTGACGATTACATTGAGCCATTAACTGTCTTTCTCAATCGCTACCGCGAGTCGGAGAGTGATCGAATGCGTACGGAACCGATCTTGAGGCGCAATGTGGATTATGGACCACAAGTAGGGATGGTTCCACCGTATGGCCAGACATTTCAGATAGGGCACGTCCCAACAGGAATGTTTGATGCAATGGGCGGGTACTACGATGGAGGTGGCAATGGCGGGTCGAGCTCGGGCAATGGTAGTCAACTTTGA

mRNA sequence

ATGAATCTAAAGTATTTGGTTTCAGCTTTGAATGAATTGGTAACTGCAAACAAGTCATCCTCTGCCAAAAGCAACCACCAACAATCAAAGAGTAGAAACGTTGCGGCCAAGTCCCCTGTGACTGGCTCTACCCCTGCCTCAATCGCTGCCACCAACAATGAGCAGAGCCAACAATGCATTGTGCGGGAGCAGGACCAATACATGCCAATCGCTAATGTGATACGCATCATGCGACGAATCTTACCGTCTCATGCAAAGATATCTGATGATGCAAAGGAAACCATCCAAGAATGTGTGTCTGAGTATATCAGCTTCATTACTGGTGAGGCCAACGAGCGATGCCAAAGGGAGCAGCGTAAGACAGTGACAGCAGAGGATGTCCTTTGGGCCATGGGGAAGCTAGGGTTTGACGATTACATTGAGCCATTAACTGTCTTTCTCAATCGCTACCGCGAGTCGGAGAGTGATCGAATGCGTACGGAACCGATCTTGAGGCGCAATGTGGATTATGGACCACAAGTAGGGATGGTTCCACCGTATGGCCAGACATTTCAGATAGGGCACGTCCCAACAGGAATGTTTGATGCAATGGGCGGGTACTACGATGGAGGTGGCAATGGCGGGTCGAGCTCGGGCAATGGTAGTCAACTTTGA

Coding sequence (CDS)

ATGAATCTAAAGTATTTGGTTTCAGCTTTGAATGAATTGGTAACTGCAAACAAGTCATCCTCTGCCAAAAGCAACCACCAACAATCAAAGAGTAGAAACGTTGCGGCCAAGTCCCCTGTGACTGGCTCTACCCCTGCCTCAATCGCTGCCACCAACAATGAGCAGAGCCAACAATGCATTGTGCGGGAGCAGGACCAATACATGCCAATCGCTAATGTGATACGCATCATGCGACGAATCTTACCGTCTCATGCAAAGATATCTGATGATGCAAAGGAAACCATCCAAGAATGTGTGTCTGAGTATATCAGCTTCATTACTGGTGAGGCCAACGAGCGATGCCAAAGGGAGCAGCGTAAGACAGTGACAGCAGAGGATGTCCTTTGGGCCATGGGGAAGCTAGGGTTTGACGATTACATTGAGCCATTAACTGTCTTTCTCAATCGCTACCGCGAGTCGGAGAGTGATCGAATGCGTACGGAACCGATCTTGAGGCGCAATGTGGATTATGGACCACAAGTAGGGATGGTTCCACCGTATGGCCAGACATTTCAGATAGGGCACGTCCCAACAGGAATGTTTGATGCAATGGGCGGGTACTACGATGGAGGTGGCAATGGCGGGTCGAGCTCGGGCAATGGTAGTCAACTTTGA

Protein sequence

MNLKYLVSALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL

Homology

[Close]

BLAST of Csor.00g205960 vs. ExPASy Swiss-Prot
Match: Q9SFD8 (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NFYB9 PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-48
Identity = 112/195 (57.44%), Postives = 132/195 (67.69%), Query Frame = 0


Query: 38  SPVTGSTPASIAATNN-----EQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAK 97
           +P+T S   + A   N     +Q   C+ REQDQYMPIANVIRIMR+ LPSHAKISDDAK
Sbjct: 29  TPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMPIANVIRIMRKTLPSHAKISDDAK 88

Query: 98  ETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRE 157
           ETIQECVSEYISF+TGEANERCQREQRKT+TAED+LWAM KLGFD+Y++PLTVF+NRYRE
Sbjct: 89  ETIQECVSEYISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYRE 148

Query: 158 SESDR---MRTEPILRRNV-------DYGPQVGMVPPYGQTFQIGHVPTGMFDAMGGYYD 216
            E+DR   +R EP   R          +GP  G+ PP    +  G +   M    G YY 
Sbjct: 149 IETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP--GPYGYGMLDQSMVMGGGRYYQ 208

[Close]

BLAST of Csor.00g205960 vs. ExPASy Swiss-Prot
Match: Q84W66 (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-46
Identity = 88/107 (82.24%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 51  TNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 110
           T+N   ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEA
Sbjct: 46  TSNGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEA 105

Query: 111 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 158
           NERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 106 NERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

[Close]

BLAST of Csor.00g205960 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.0e-34
Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 52  NNEQSQQCI-VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 111
           NN+  Q  +  REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA
Sbjct: 15  NNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEA 74

Query: 112 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRM------------ 171
           +++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R             
Sbjct: 75  SDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGRPQTGGEVG 134

Query: 172 --RTEPILRRNVDYGPQVGMVPPYGQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSG 213
             + + +      YG   GM   Y Q  Q  H    M+ A GG  D G  GG++SG
Sbjct: 135 EHQRDAVGDGGGFYGGGGGM--QYHQHHQFLHQQNHMYGATGGGSDSG--GGAASG 186

[Close]

BLAST of Csor.00g205960 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.6e-34
Identity = 64/99 (64.65%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 62  REQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKT 121
           REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT
Sbjct: 20  REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79

Query: 122 VTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRT 161
           +  +D+LWAM  LGF+DY+EPL V+L +YRE E ++  T
Sbjct: 80  INGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 118

[Close]

BLAST of Csor.00g205960 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-33
Identity = 62/100 (62.00%), Postives = 84/100 (84.00%), Query Frame = 0


Query: 61  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 120
           VREQD+++PIAN+ RIM++ +P++ KI+ DAKET+QECVSE+ISFIT EA+++CQRE+RK
Sbjct: 36  VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRK 95

Query: 121 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRT 161
           T+  +D+LWAM  LGF+DYIEPL V+L +YRE E D   T
Sbjct: 96  TINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLT 135

[Close]

BLAST of Csor.00g205960 vs. NCBI nr
Match: KAG6596759.1 (Nuclear transcription factor Y subunit B-9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 422 bits (1086), Expect = 6.82e-149
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MNLKYLVSALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCI 60
           MNLKYLVSALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCI
Sbjct: 1   MNLKYLVSALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCI 60

Query: 61  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 120
           VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK
Sbjct: 61  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 120

Query: 121 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPY 180
           TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPY
Sbjct: 121 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPY 180

Query: 181 GQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           GQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL
Sbjct: 181 GQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217

[Close]

BLAST of Csor.00g205960 vs. NCBI nr
Match: XP_022944445.1 (nuclear transcription factor Y subunit B-9-like [Cucurbita moschata])

HSP 1 Score: 384 bits (987), Expect = 1.78e-133
Identity = 201/214 (93.93%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 8   SALNELVTANKSSSAK----SNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCIVRE 67
           SALN L+T NKSSSA     SNHQQS SRNVAA SPVTGS PASIAATNNEQSQQCIVRE
Sbjct: 25  SALNVLLTTNKSSSANNTHNSNHQQSNSRNVAANSPVTGSIPASIAATNNEQSQQCIVRE 84

Query: 68  QDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVT 127
           QDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVT
Sbjct: 85  QDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVT 144

Query: 128 AEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQT 187
           AEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMV PYGQT
Sbjct: 145 AEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVTPYGQT 204

Query: 188 FQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           FQIGHVP GMFDAMGGYYDGGGNGGSSSGNGSQL
Sbjct: 205 FQIGHVPIGMFDAMGGYYDGGGNGGSSSGNGSQL 238

[Close]

BLAST of Csor.00g205960 vs. NCBI nr
Match: KAG6596760.1 (Nuclear transcription factor Y subunit B-9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377 bits (969), Expect = 8.53e-131
Identity = 196/212 (92.45%), Postives = 199/212 (93.87%), Query Frame = 0


Query: 10  LNELVTANKSSSAK----SNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCIVREQD 69
           LN L+T NKSSSA     SNHQQS SR +AA SPVTGS PASIAATNN QSQQCIVREQD
Sbjct: 23  LNVLLTTNKSSSANNTRNSNHQQSNSRIIAANSPVTGSIPASIAATNNGQSQQCIVREQD 82

Query: 70  QYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAE 129
           QYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAE
Sbjct: 83  QYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAE 142

Query: 130 DVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQ 189
           DVLWAMGKLGFDDY+EPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQ
Sbjct: 143 DVLWAMGKLGFDDYVEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQ 202

Query: 190 IGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           IGHVPTGMFDAMGGYYDGGGN GSSSGNGSQL
Sbjct: 203 IGHVPTGMFDAMGGYYDGGGNDGSSSGNGSQL 234

[Close]

BLAST of Csor.00g205960 vs. NCBI nr
Match: XP_023005517.1 (nuclear transcription factor Y subunit B-3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 375 bits (964), Expect = 4.93e-130
Identity = 193/210 (91.90%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 8   SALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCIVREQDQY 67
           SALN L+T NKSS A +NHQQS  RN+AA S +TGST ASIAATNN +SQQCIVREQDQY
Sbjct: 25  SALNVLLTTNKSSFANNNHQQSNGRNIAANSLMTGSTCASIAATNNGKSQQCIVREQDQY 84

Query: 68  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 127
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 85  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 144

Query: 128 LWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQIG 187
           LWAMGKLGFDDYIEPLTVFLNRYRE ESDR+RTEPILRRNVDYGPQVGMVPPYGQTFQIG
Sbjct: 145 LWAMGKLGFDDYIEPLTVFLNRYRELESDRIRTEPILRRNVDYGPQVGMVPPYGQTFQIG 204

Query: 188 HVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           HVPTGMFDAMGGYYDGGGNGGSSSGNGSQL
Sbjct: 205 HVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 234

[Close]

BLAST of Csor.00g205960 vs. NCBI nr
Match: XP_022952052.1 (nuclear transcription factor Y subunit B-9-like [Cucurbita moschata])

HSP 1 Score: 374 bits (961), Expect = 7.72e-130
Identity = 193/217 (88.94%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MNLKYLVSALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCI 60
           MNLK+LVSALN L+T NKSS A SNHQQS SRNVAAKSPVTGSTPASIAATNNEQSQQCI
Sbjct: 1   MNLKHLVSALNVLLTTNKSSPANSNHQQSNSRNVAAKSPVTGSTPASIAATNNEQSQQCI 60

Query: 61  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 120
           VREQDQYMPIAN+IRIMRRILPSHAKISDDAKE IQECVSEYISFIT EANE+CQREQRK
Sbjct: 61  VREQDQYMPIANMIRIMRRILPSHAKISDDAKEIIQECVSEYISFITSEANEQCQREQRK 120

Query: 121 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPY 180
           TVTAEDVLWAMGKLGFD+YI+PL VFLN YRE ESDR+RTEPI+RRNVDYGP VGM+ PY
Sbjct: 121 TVTAEDVLWAMGKLGFDNYIKPLIVFLNCYRELESDRIRTEPIMRRNVDYGPHVGMISPY 180

Query: 181 GQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           GQTFQIGHVPT MFDAMG YYDGGGNGGSSSGN SQL
Sbjct: 181 GQTFQIGHVPTEMFDAMGRYYDGGGNGGSSSGNDSQL 217

[Close]

BLAST of Csor.00g205960 vs. ExPASy TrEMBL
Match: A0A6J1FYN7 (nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN=LOC111448893 PE=3 SV=1)

HSP 1 Score: 384 bits (987), Expect = 8.61e-134
Identity = 201/214 (93.93%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 8   SALNELVTANKSSSAK----SNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCIVRE 67
           SALN L+T NKSSSA     SNHQQS SRNVAA SPVTGS PASIAATNNEQSQQCIVRE
Sbjct: 25  SALNVLLTTNKSSSANNTHNSNHQQSNSRNVAANSPVTGSIPASIAATNNEQSQQCIVRE 84

Query: 68  QDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVT 127
           QDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVT
Sbjct: 85  QDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVT 144

Query: 128 AEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQT 187
           AEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMV PYGQT
Sbjct: 145 AEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVTPYGQT 204

Query: 188 FQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           FQIGHVP GMFDAMGGYYDGGGNGGSSSGNGSQL
Sbjct: 205 FQIGHVPIGMFDAMGGYYDGGGNGGSSSGNGSQL 238

[Close]

BLAST of Csor.00g205960 vs. ExPASy TrEMBL
Match: A0A6J1KTC3 (nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498480 PE=3 SV=1)

HSP 1 Score: 375 bits (964), Expect = 2.39e-130
Identity = 193/210 (91.90%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 8   SALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCIVREQDQY 67
           SALN L+T NKSS A +NHQQS  RN+AA S +TGST ASIAATNN +SQQCIVREQDQY
Sbjct: 25  SALNVLLTTNKSSFANNNHQQSNGRNIAANSLMTGSTCASIAATNNGKSQQCIVREQDQY 84

Query: 68  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 127
           MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV
Sbjct: 85  MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDV 144

Query: 128 LWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQIG 187
           LWAMGKLGFDDYIEPLTVFLNRYRE ESDR+RTEPILRRNVDYGPQVGMVPPYGQTFQIG
Sbjct: 145 LWAMGKLGFDDYIEPLTVFLNRYRELESDRIRTEPILRRNVDYGPQVGMVPPYGQTFQIG 204

Query: 188 HVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           HVPTGMFDAMGGYYDGGGNGGSSSGNGSQL
Sbjct: 205 HVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 234

[Close]

BLAST of Csor.00g205960 vs. ExPASy TrEMBL
Match: A0A6J1GJB5 (nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN=LOC111454760 PE=3 SV=1)

HSP 1 Score: 374 bits (961), Expect = 3.74e-130
Identity = 193/217 (88.94%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MNLKYLVSALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCI 60
           MNLK+LVSALN L+T NKSS A SNHQQS SRNVAAKSPVTGSTPASIAATNNEQSQQCI
Sbjct: 1   MNLKHLVSALNVLLTTNKSSPANSNHQQSNSRNVAAKSPVTGSTPASIAATNNEQSQQCI 60

Query: 61  VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRK 120
           VREQDQYMPIAN+IRIMRRILPSHAKISDDAKE IQECVSEYISFIT EANE+CQREQRK
Sbjct: 61  VREQDQYMPIANMIRIMRRILPSHAKISDDAKEIIQECVSEYISFITSEANEQCQREQRK 120

Query: 121 TVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPY 180
           TVTAEDVLWAMGKLGFD+YI+PL VFLN YRE ESDR+RTEPI+RRNVDYGP VGM+ PY
Sbjct: 121 TVTAEDVLWAMGKLGFDNYIKPLIVFLNCYRELESDRIRTEPIMRRNVDYGPHVGMISPY 180

Query: 181 GQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           GQTFQIGHVPT MFDAMG YYDGGGNGGSSSGN SQL
Sbjct: 181 GQTFQIGHVPTEMFDAMGRYYDGGGNGGSSSGNDSQL 217

[Close]

BLAST of Csor.00g205960 vs. ExPASy TrEMBL
Match: A0A6J1KV71 (nuclear transcription factor Y subunit B-9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498480 PE=3 SV=1)

HSP 1 Score: 373 bits (958), Expect = 3.10e-129
Identity = 191/209 (91.39%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 9   ALNELVTANKSSSAKSNHQQSKSRNVAAKSPVTGSTPASIAATNNEQSQQCIVREQDQYM 68
           +LN L+T NKSS A +NHQQS  RN+AA S +TGST ASIAATNN +SQQCIVREQDQYM
Sbjct: 39  SLNVLLTTNKSSFANNNHQQSNGRNIAANSLMTGSTCASIAATNNGKSQQCIVREQDQYM 98

Query: 69  PIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVL 128
           PIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVL
Sbjct: 99  PIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVL 158

Query: 129 WAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQIGH 188
           WAMGKLGFDDYIEPLTVFLNRYRE ESDR+RTEPILRRNVDYGPQVGMVPPYGQTFQIGH
Sbjct: 159 WAMGKLGFDDYIEPLTVFLNRYRELESDRIRTEPILRRNVDYGPQVGMVPPYGQTFQIGH 218

Query: 189 VPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           VPTGMFDAMGGYYDGGGNGGSSSGNGSQL
Sbjct: 219 VPTGMFDAMGGYYDGGGNGGSSSGNGSQL 247

[Close]

BLAST of Csor.00g205960 vs. ExPASy TrEMBL
Match: A0A5D3CPF3 (Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00390 PE=3 SV=1)

HSP 1 Score: 326 bits (836), Expect = 3.22e-111
Identity = 171/211 (81.04%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 13  LVTANKSSSAKS----NHQQSKSRNVAAKSPVTGSTPASIAAT--NNEQSQQCIVREQDQ 72
           +VT NK++S  S    NH  S        S  T  +P S+AAT  NNEQ+QQC+VREQDQ
Sbjct: 2   MVTPNKATSINSTPNSNHHLSNGGTATGNSSAT--SPLSVAATANNNEQNQQCVVREQDQ 61

Query: 73  YMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAED 132
           YMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAED
Sbjct: 62  YMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAED 121

Query: 133 VLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRTEPILRRNVDYGPQVGMVPPYGQTFQI 192
           VLWAMGKLGFDDYIEPLTVFLNRYRESESDR+RTEPILRRNVDYGPQVGM+ PYGQ FQI
Sbjct: 122 VLWAMGKLGFDDYIEPLTVFLNRYRESESDRIRTEPILRRNVDYGPQVGMISPYGQAFQI 181

Query: 193 GHVPTGMFDAMGGYYDGGGNGGSSSGNGSQL 217
           GHVP GMFDAMGGYY GGG GG S+GNGSQL
Sbjct: 182 GHVPAGMFDAMGGYYGGGGGGGPSAGNGSQL 210

[Close]

BLAST of Csor.00g205960 vs. TAIR 10
Match: AT1G21970.1 (Histone superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-49
Identity = 112/195 (57.44%), Postives = 132/195 (67.69%), Query Frame = 0


Query: 38  SPVTGSTPASIAATNN-----EQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAK 97
           +P+T S   + A   N     +Q   C+ REQDQYMPIANVIRIMR+ LPSHAKISDDAK
Sbjct: 29  TPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQDQYMPIANVIRIMRKTLPSHAKISDDAK 88

Query: 98  ETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRE 157
           ETIQECVSEYISF+TGEANERCQREQRKT+TAED+LWAM KLGFD+Y++PLTVF+NRYRE
Sbjct: 89  ETIQECVSEYISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYRE 148

Query: 158 SESDR---MRTEPILRRNV-------DYGPQVGMVPPYGQTFQIGHVPTGMFDAMGGYYD 216
            E+DR   +R EP   R          +GP  G+ PP    +  G +   M    G YY 
Sbjct: 149 IETDRGSALRGEPPSLRQTYGGNGIGFHGPSHGLPPP--GPYGYGMLDQSMVMGGGRYYQ 208

[Close]

BLAST of Csor.00g205960 vs. TAIR 10
Match: AT5G47670.1 (nuclear factor Y, subunit B6 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 88/107 (82.24%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 51  TNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 110
           T+N   ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEA
Sbjct: 46  TSNGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEA 105

Query: 111 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 158
           NERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 106 NERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 152

[Close]

BLAST of Csor.00g205960 vs. TAIR 10
Match: AT5G47670.2 (nuclear factor Y, subunit B6 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 88/107 (82.24%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 51  TNNEQSQQCIVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 110
           T+N   ++C VREQD++MPIANVIRIMRRILP+HAKISDD+KETIQECVSEYISFITGEA
Sbjct: 17  TSNGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEA 76

Query: 111 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDR 158
           NERCQREQRKT+TAEDVLWAM KLGFDDYIEPLT++L+RYRE E +R
Sbjct: 77  NERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGER 123

[Close]

BLAST of Csor.00g205960 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 146.0 bits (367), Expect = 3.6e-35
Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 52  NNEQSQQCI-VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEA 111
           NN+  Q  +  REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISF+TGEA
Sbjct: 15  NNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEA 74

Query: 112 NERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRM------------ 171
           +++CQ+E+RKT+  +D+LWAM  LGF+DY+EPL V+L R+RE E +R             
Sbjct: 75  SDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGRPQTGGEVG 134

Query: 172 --RTEPILRRNVDYGPQVGMVPPYGQTFQIGHVPTGMFDAMGGYYDGGGNGGSSSG 213
             + + +      YG   GM   Y Q  Q  H    M+ A GG  D G  GG++SG
Sbjct: 135 EHQRDAVGDGGGFYGGGGGM--QYHQHHQFLHQQNHMYGATGGGSDSG--GGAASG 186

[Close]

BLAST of Csor.00g205960 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-35
Identity = 64/99 (64.65%), Postives = 86/99 (86.87%), Query Frame = 0


Query: 62  REQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKT 121
           REQD+++PIANV RIM++ LP++AKIS DAKET+QECVSE+ISFITGEA+++CQRE+RKT
Sbjct: 20  REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 79

Query: 122 VTAEDVLWAMGKLGFDDYIEPLTVFLNRYRESESDRMRT 161
           +  +D+LWAM  LGF+DY+EPL V+L +YRE E ++  T
Sbjct: 80  INGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTT 118

The following BLAST results are available for this feature:

BLAST of Csor.00g205960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFD8	1.6e-48	57.44	Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84W66	2.0e-46	82.24	Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FGJ3	5.0e-34	47.16	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
O23310	6.6e-34	64.65	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q60EQ4	5.6e-33	62.00	Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Csor.00g205960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596759.1	6.82e-149	100.00	Nuclear transcription factor Y subunit B-9, partial [Cucurbita argyrosperma subs...	[more]
XP_022944445.1	1.78e-133	93.93	nuclear transcription factor Y subunit B-9-like [Cucurbita moschata]	[more]
KAG6596760.1	8.53e-131	92.45	Nuclear transcription factor Y subunit B-9, partial [Cucurbita argyrosperma subs...	[more]
XP_023005517.1	4.93e-130	91.90	nuclear transcription factor Y subunit B-3-like isoform X2 [Cucurbita maxima]	[more]
XP_022952052.1	7.72e-130	88.94	nuclear transcription factor Y subunit B-9-like [Cucurbita moschata]	[more]

BLAST of Csor.00g205960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYN7	8.61e-134	93.93	nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTC3	2.39e-130	91.90	nuclear transcription factor Y subunit B-3-like isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1GJB5	3.74e-130	88.94	nuclear transcription factor Y subunit B-9-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KV71	3.10e-129	91.39	nuclear transcription factor Y subunit B-9-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A5D3CPF3	3.22e-111	81.04	Nuclear transcription factor Y subunit B-9 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Csor.00g205960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21970.1	1.1e-49	57.44	Histone superfamily protein	[more]
AT5G47670.1	1.4e-47	82.24	nuclear factor Y, subunit B6	[more]
AT5G47670.2	1.4e-47	82.24	nuclear factor Y, subunit B6	[more]
AT5G47640.1	3.6e-35	47.16	nuclear factor Y, subunit B2	[more]
AT4G14540.1	4.7e-35	64.65	nuclear factor Y, subunit B3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 95..113 score: 43.9 coord: 133..151 score: 31.46 coord: 114..132 score: 32.06
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..53
None	No IPR available	PANTHER	PTHR11064:SF115	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9	coord: 37..196
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 52..168 e-value: 6.1E-41 score: 141.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 64..157
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 68..131 e-value: 2.5E-25 score: 88.5
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 37..196
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 98..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g205960.m01	Csor.00g205960.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding