Csor.00g205700 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGCTTACTACAACTTCTGGTGCCATGCTTTCTCTTCTACCCCCAGGTACAAGCAACTTTCCAAATCGTTTTACTTATTTGATGTAAGTGGAAATGAATGGATTTTAATTACCATAAAAAAGGATGAGTACAAGAGAGAAAAAAAAAAATGGATAAGGGATATCCCCTACCTCAGAAAGGAACTTGTAAGAATCAACCCATATCTAATTTGATTCCAGGAGCTAGATAATTTAGAATTCCTATTATAGTACTCCAACATGAGGTGTGCTGTAGTGTGTACAATTCAAGAAATTGACCGAAGTTCTAACGATACATTGAAGGATTCTGTTGTTCTTTTCAATCTAAAGTTGCATATAATGGTTTTGGAAGGATTTCCTAGAAGAAATCTACCTTTTTCAGCCACCAGCCCTCTAAAACTTCTGAAATCAGATATCTCACATCCTTCAGGAAGCTCCAAGAATCCTAAATTTGACATGATTAGATGTTATATGCTCTCATACTAATATCTACCTTGGGTTATTAAGTTTGGAAACTTAATTTTGCTGGTATAGATCCACTCAAGCAATCTGATTGTTGAGATAACATTTCTCAGGCTAAGAAATGAAACTAATTAGCTTATGTTTTGAATTTGAAGATCATTATGTTTACATTGGTTTTCTTATTCAGTTAAAAAGTGGATTCTCGTTTAAATTATTGTTCTATTACCATTTGGGGAGAAAAGAAAAAAAAAAATTTATTCTATTACCATTAATGTGACAACTTTTTGATATTTAGTTGTAATATTGTTATTGTAAAACAGTGGGTCAGCATTGGGGAAGAATGAAGGCCATAAACTTCCATCTTAGTAGGGATAGTTTCCAAGTTCGAACTTCTAATGGGAGGAGACAACCAGTGATTGCTAAAGCAGGACCACTTTATGTCAAACCGATCCTATCTACTGGGAAAAGGGGAGGTGTTCTATATTCAAGTAGAAAGAACAACGCTTTCATATGTTTTGCTGCTTTGGTAAGTTGTTTCTTGGTCTATATGTGTACTTTTGTTAGATGAACACGACCCTCCACAATAGTATGATATCGTCCACTTTGAGCAGAAGCTCTCATGACTTTATTGTGGACTTCCCCAAAAGAAAAGCAACGTACCAATGGAAATAATATTATTTGATTATAGACCCATGATCATTCTCCCTAAATTAGCCGATAAGGACCTTCATCCAACACCTCTCCTCGAACAAAGTACGTCTTCCCTTAATCGAGGCTTGACTTCTTTTTTCTTTTGGAGTCTTAGTCATTTTTTACTATGCCTTGGACTTTTTCTTTTGGATTGTTCGACATTTGAGGATTCTATTGGCATGACTAAGTTTAAAAGCATGGTTCTGATACCATGTTAGATGAACACGACTCTTTACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCATTGGACTTCCCCAAAAGGCCTCATACCAATGGAGACCAATGGAGATAGTATTCTTTGATTATAAATCCATGATCATTCCCTAAATTAGCTGACGTGGGACTTCCCGTGTTTATTTTCTTTTGGTATTTAATTGGTAATAACTTTTTTTTATTAGAAACATTATGTTAGTAGCACGGAATGTGTGTAGATGCCAAGGGAGATTATCAGAAGTTCTCCCAAGTTGTTGAAATGAGTTGGGGCATTTCTCTGGGAAGGAATCATCAAAATTTTAGTGGGGGTGAGAGATATACGTAAGAGTTGTGATAGGTTATTAATGGTGCTGTTTGTCTGCAGAATGCTAGATGTGCGGCGGAGCAGACCCAAACTGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGTAATGCAGATTTTATGAATAATAGTAACTGCTAACATCAATCTTCCTAGCACTAAGCTGCATATGCACATATTTTTCCATTCAACTTGGACGCCTATCTTTTACACCTTGAAAATAACTTGCATCACTAGGTTCTTAACATTTTGTTGTCTCCCTCGCATACATGATGTTGTCGTAGGCTATCATAATTATGGCTGTTGCTTACCTTTATTTTTAAACCATACATTGGATTACCTAAAACAAAAATTGCAGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGGTTTCCACCTCGTGATGATGGTGATGGCGGCGGCGGCGGCGGTGGAGGGGGTGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCTTTCCTAGGCTTCTTAAAAGATAAAGAAAGCGAAGAGCCTTATCAGAATGACCGGAGAAGATAA ATGGAGATGCTTACTACAACTTCTGGTGCCATGCTTTCTCTTCTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCATAAACTTCCATCTTAGTAGGGATAGTTTCCAAGTTCGAACTTCTAATGGGAGGAGACAACCAGTGATTGCTAAAGCAGGACCACTTTATGTCAAACCGATCCTATCTACTGGGAAAAGGGGAGGTGTTCTATATTCAAGTAGAAAGAACAACGCTTTCATATGTTTTGCTGCTTTGAATGCTAGATGTGCGGCGGAGCAGACCCAAACTGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGGTTTCCACCTCGTGATGATGGTGATGGCGGCGGCGGCGGCGGTGGAGGGGGTGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCTTTCCTAGGCTTCTTAAAAGATAAAGAAAGCGAAGAGCCTTATCAGAATGACCGGAGAAGATAA ATGGAGATGCTTACTACAACTTCTGGTGCCATGCTTTCTCTTCTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCATAAACTTCCATCTTAGTAGGGATAGTTTCCAAGTTCGAACTTCTAATGGGAGGAGACAACCAGTGATTGCTAAAGCAGGACCACTTTATGTCAAACCGATCCTATCTACTGGGAAAAGGGGAGGTGTTCTATATTCAAGTAGAAAGAACAACGCTTTCATATGTTTTGCTGCTTTGAATGCTAGATGTGCGGCGGAGCAGACCCAAACTGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGGTTTCCACCTCGTGATGATGGTGATGGCGGCGGCGGCGGCGGTGGAGGGGGTGGCAACTGGTCTGGTGGATTCTTCTTCTTTGGCTTCCTTGCTTTCCTAGGCTTCTTAAAAGATAAAGAAAGCGAAGAGCCTTATCAGAATGACCGGAGAAGATAA MEMLTTTSGAMLSLLPPVGQHWGRMKAINFHLSRDSFQVRTSNGRRQPVIAKAGPLYVKPILSTGKRGGVLYSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEEPYQNDRRR Homology
BLAST of Csor.00g205700 vs. ExPASy Swiss-Prot
Match: Q0E3V2 (Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=YL1 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08 Identity = 44/99 (44.44%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy Swiss-Prot
Match: F1SZ44 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.8e-08 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy Swiss-Prot
Match: F1SZ42 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.5e-08 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy Swiss-Prot
Match: F1SZ41 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RF2 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.5e-08 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Csor.00g205700 vs. NCBI nr
Match: KAG6596785.1 (Protein YELLOW LEAF 1, choloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 345 bits (886), Expect = 8.02e-120 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Csor.00g205700 vs. NCBI nr
Match: XP_022949842.1 (uncharacterized protein LOC111453117 [Cucurbita moschata] >XP_022949851.1 uncharacterized protein LOC111453117 [Cucurbita moschata]) HSP 1 Score: 343 bits (879), Expect = 9.36e-119 Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of Csor.00g205700 vs. NCBI nr
Match: KAG7028313.1 (hypothetical protein SDJN02_09494 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 341 bits (874), Expect = 5.61e-118 Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of Csor.00g205700 vs. NCBI nr
Match: XP_023005574.1 (uncharacterized protein LOC111498519 isoform X1 [Cucurbita maxima] >XP_023005575.1 uncharacterized protein LOC111498519 isoform X1 [Cucurbita maxima] >XP_023005577.1 uncharacterized protein LOC111498519 isoform X2 [Cucurbita maxima]) HSP 1 Score: 335 bits (860), Expect = 7.39e-116 Identity = 169/174 (97.13%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of Csor.00g205700 vs. NCBI nr
Match: XP_023540533.1 (uncharacterized protein LOC111800870 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335 bits (858), Expect = 1.49e-115 Identity = 167/174 (95.98%), Postives = 171/174 (98.28%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy TrEMBL
Match: A0A6J1GD79 (uncharacterized protein LOC111453117 OS=Cucurbita moschata OX=3662 GN=LOC111453117 PE=4 SV=1) HSP 1 Score: 343 bits (879), Expect = 4.53e-119 Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy TrEMBL
Match: A0A6J1KZM4 (uncharacterized protein LOC111498519 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498519 PE=4 SV=1) HSP 1 Score: 335 bits (860), Expect = 3.58e-116 Identity = 169/174 (97.13%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy TrEMBL
Match: A0A6J1CP11 (uncharacterized protein LOC111013392 OS=Momordica charantia OX=3673 GN=LOC111013392 PE=4 SV=1) HSP 1 Score: 296 bits (757), Expect = 1.81e-100 Identity = 150/174 (86.21%), Postives = 156/174 (89.66%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy TrEMBL
Match: A0A6J1F258 (uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC111438781 PE=4 SV=1) HSP 1 Score: 294 bits (753), Expect = 7.61e-100 Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 0
BLAST of Csor.00g205700 vs. ExPASy TrEMBL
Match: A0A6J1HQC3 (uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127 PE=4 SV=1) HSP 1 Score: 292 bits (747), Expect = 6.25e-99 Identity = 149/175 (85.14%), Postives = 161/175 (92.00%), Query Frame = 0
BLAST of Csor.00g205700 vs. TAIR 10
Match: AT1G56200.1 (embryo defective 1303 ) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34 Identity = 79/119 (66.39%), Postives = 90/119 (75.63%), Query Frame = 0
BLAST of Csor.00g205700 vs. TAIR 10
Match: AT1G56200.2 (embryo defective 1303 ) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34 Identity = 79/119 (66.39%), Postives = 90/119 (75.63%), Query Frame = 0
BLAST of Csor.00g205700 vs. TAIR 10
Match: AT1G30475.1 (BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 148 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 14; Metazoa - 63; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Csor.00g205700 vs. TAIR 10
Match: AT1G30475.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Csor.00g205700 vs. TAIR 10
Match: AT1G30475.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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