Csor.00g204610 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g204610
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ABC transporter domain-containing protein
Location	Csor_Chr06: 4647590 .. 4648279 (+)
RNA-Seq Expression	Csor.00g204610
Synteny	Csor.00g204610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCAGGAAGCCACCACTTCCTCGCCTTCTACTCAACCAGGTCTCTTGCATGCGGAATGCCCAACAAATCCTTAGAAATGTTAACGTCTCGATCCATGATGGCAGTGCGCTCGTGTTAACCGGGACCAATGGTTCAGGTAAAACGACATTCCTACGAATGTTAGCTGGATTCTCTCGGCCTTCTACAGGTGAGATCCTATGGAATGGCCATGACATTACAGAATCAGGAGTGTTCCATCAATACAAGCTGCAGCTGAACTGGCTCTCACTAAAAGATGCCATTAAAGAGAACTTCACCGTCATCGACAACGTTCAATGGTTCGAGGTGCTCGAGGGGAAGCAAGGCAAGTCATTGCCTTCCCTCCAATTGATGGGGCTTGGAAAATTGGCAAAAGAGAAGGCGAGAATGTTGTCGATGGGGCAACGAAAACGACTTCAGCTAGCAAGATTGTTGGCCCTTGACAGACCAATTTGGCTGCTTGATGAGCCTTCAGTTGCATTAGATGATGATGGGGTGAAGCTGCTGGAATACATCATTGCAGAGCACAGAAAGAAAGGTGGAATTGTTATTGTAGCAACACATATTCCAATAAAGATTGAAGATGCCATGATCTTGAGGCTTCCACCGCGGTTCCCACGGAGAATGACATTGGTTGATATGCTTGATCGGGCTGACATATCATAG

mRNA sequence

ATGTCTCTCAGGAAGCCACCACTTCCTCGCCTTCTACTCAACCAGGTCTCTTGCATGCGGAATGCCCAACAAATCCTTAGAAATGTTAACGTCTCGATCCATGATGGCAGTGCGCTCGTGTTAACCGGGACCAATGGTTCAGGTAAAACGACATTCCTACGAATGTTAGCTGGATTCTCTCGGCCTTCTACAGGTGAGATCCTATGGAATGGCCATGACATTACAGAATCAGGAGTGTTCCATCAATACAAGCTGCAGCTGAACTGGCTCTCACTAAAAGATGCCATTAAAGAGAACTTCACCGTCATCGACAACGTTCAATGGTTCGAGGTGCTCGAGGGGAAGCAAGGCAAGTCATTGCCTTCCCTCCAATTGATGGGGCTTGGAAAATTGGCAAAAGAGAAGGCGAGAATGTTGTCGATGGGGCAACGAAAACGACTTCAGCTAGCAAGATTGTTGGCCCTTGACAGACCAATTTGGCTGCTTGATGAGCCTTCAGTTGCATTAGATGATGATGGGGTGAAGCTGCTGGAATACATCATTGCAGAGCACAGAAAGAAAGGTGGAATTGTTATTGTAGCAACACATATTCCAATAAAGATTGAAGATGCCATGATCTTGAGGCTTCCACCGCGGTTCCCACGGAGAATGACATTGGTTGATATGCTTGATCGGGCTGACATATCATAG

Coding sequence (CDS)

ATGTCTCTCAGGAAGCCACCACTTCCTCGCCTTCTACTCAACCAGGTCTCTTGCATGCGGAATGCCCAACAAATCCTTAGAAATGTTAACGTCTCGATCCATGATGGCAGTGCGCTCGTGTTAACCGGGACCAATGGTTCAGGTAAAACGACATTCCTACGAATGTTAGCTGGATTCTCTCGGCCTTCTACAGGTGAGATCCTATGGAATGGCCATGACATTACAGAATCAGGAGTGTTCCATCAATACAAGCTGCAGCTGAACTGGCTCTCACTAAAAGATGCCATTAAAGAGAACTTCACCGTCATCGACAACGTTCAATGGTTCGAGGTGCTCGAGGGGAAGCAAGGCAAGTCATTGCCTTCCCTCCAATTGATGGGGCTTGGAAAATTGGCAAAAGAGAAGGCGAGAATGTTGTCGATGGGGCAACGAAAACGACTTCAGCTAGCAAGATTGTTGGCCCTTGACAGACCAATTTGGCTGCTTGATGAGCCTTCAGTTGCATTAGATGATGATGGGGTGAAGCTGCTGGAATACATCATTGCAGAGCACAGAAAGAAAGGTGGAATTGTTATTGTAGCAACACATATTCCAATAAAGATTGAAGATGCCATGATCTTGAGGCTTCCACCGCGGTTCCCACGGAGAATGACATTGGTTGATATGCTTGATCGGGCTGACATATCATAG

Protein sequence

MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSLPSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS

Homology

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BLAST of Csor.00g204610 vs. ExPASy Swiss-Prot
Match: Q9C8T1 (ABC transporter I family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCI1 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 4.6e-110
Identity = 194/229 (84.72%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MS+R+P +PRLLL  VSCMRNAQQILR+VNVS+HDG ALVLTGTNGSGK+TFLRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           +PS GEILWNGHDIT+SG+F QYKLQLNW+SLKDAIKE FTV+DNVQWFE+LE K GK+ 
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+L+LMGLG+L KEK+RMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDD+GV+LLEYI
Sbjct: 121 PALELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 230
           IAEHRKKGGIVIVATH+PI IEDAMILRLPPRFPR+MTL+DMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHLPIDIEDAMILRLPPRFPRKMTLIDMLDRADIS 229

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BLAST of Csor.00g204610 vs. ExPASy Swiss-Prot
Match: Q2VZJ1 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=ccmA PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.8e-32
Identity = 77/199 (38.69%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 16  VSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEILWNGHDIT 75
           ++C+R  + +   +  S+  G ALVL G NGSGK++ LR+LAG  +P+ G + WNG  + 
Sbjct: 11  LACVRGGRVVFAGLGFSLSAGGALVLLGPNGSGKSSLLRVLAGLLKPAHGLLAWNGEALA 70

Query: 76  ESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEG----KQGKSL-PSLQLMGLGK 135
           E    H    + ++L   DA+K   +V +N++++  L      + G+++  +L   GL +
Sbjct: 71  EDPEAH--AARTHYLGHHDAVKPVLSVAENLRFWAHLHDPHAERAGRAVDAALSRFGLAR 130

Query: 136 LAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGI 195
           LA    +MLS GQ++R  LARLLA   P+WLLDEP+ ALD   +K+LE ++AEHR  GG+
Sbjct: 131 LATIPGKMLSAGQKRRTNLARLLAAPSPLWLLDEPTTALDKASIKVLEDVLAEHRAAGGM 190

Query: 196 VIVATHIPIKIEDAMILRL 210
           V+++TH  I +  A  L L
Sbjct: 191 VVLSTHADINMPGAQELHL 207

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BLAST of Csor.00g204610 vs. ExPASy Swiss-Prot
Match: Q2Y9Q1 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=ccmA PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 77/205 (37.56%), Postives = 117/205 (57.07%), Query Frame = 0


Query: 8   LPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEI 67
           +P L    ++C+R  +++   VN  +  G  + + G NGSGKT+ LRML G + P+ GEI
Sbjct: 1   MPTLEGIDLTCIRGDRKLFSGVNFLLESGGLMQVQGPNGSGKTSLLRMLCGLASPAEGEI 60

Query: 68  LWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEG---KQGKSLPSLQ 127
            W+G  I   G    Y   + +L     +K++ T I+N++    L G    + K+  +LQ
Sbjct: 61  RWDGTQIRSLG--GDYFGAMTYLGHLGGVKDDLTAIENLRISSALGGVDLDERKAHDALQ 120

Query: 128 LMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYIIAEH 187
            MGLG      A++LS GQR+R+ LARLL     +W+LDEP  ALD   VKL++ +I  H
Sbjct: 121 HMGLGGRELLPAKVLSQGQRRRVTLARLLVCGTVLWILDEPLTALDTSAVKLVQGLIERH 180

Query: 188 RKKGGIVIVATHIPIKIEDAMILRL 210
            + GG++++ TH  I+I  A I RL
Sbjct: 181 LEHGGMIVMTTHQEIEIAGAAIQRL 203

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BLAST of Csor.00g204610 vs. ExPASy Swiss-Prot
Match: Q8XE58 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Escherichia coli O157:H7 OX=83334 GN=ccmA PE=3 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 8.8e-29
Identity = 68/199 (34.17%), Postives = 114/199 (57.29%), Query Frame = 0


Query: 11  LLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEILWN 70
           L + ++ C R+ + +   ++ +++ G  + +TG+NG+GKTT LR+L G SRP  GE+LW 
Sbjct: 4   LEVRELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQ 63

Query: 71  GHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSLPSLQLMGLGK 130
           G  + +  V   Y   L W+  +  IK   T ++N+ ++   +G   + L +L   GL  
Sbjct: 64  GQPLHQ--VRDSYHQNLLWIGHQPGIKTRLTALENLHFYH-RDGDTAQCLEALAQAGLAG 123

Query: 131 LAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGI 190
                   LS GQ++R+ LARL      +W+LDEP  A+D +GV  L   +A+H ++GGI
Sbjct: 124 FEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGI 183

Query: 191 VIVATHIPIKIEDAMILRL 210
           VI+ TH P+ + ++ I R+
Sbjct: 184 VILTTHQPLNVAESKIRRI 199

[Close]

BLAST of Csor.00g204610 vs. ExPASy Swiss-Prot
Match: Q82WC8 (Cytochrome c biogenesis ATP-binding export protein CcmA OS=Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) OX=228410 GN=ccmA PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.8e-29
Identity = 74/199 (37.19%), Postives = 114/199 (57.29%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           M+    P+  L    + C+R   ++  N++ S++ G  + + G NGSGKT+ LR+L G S
Sbjct: 1   MTTGPSPIEMLTARNLECIRGEHRLFSNLSFSVNPGELMFVGGPNGSGKTSLLRLLCGLS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEG---KQG 120
            P  GEI WNG DI + GV   Y+  + +L     IK++ T I+N++    L G    + 
Sbjct: 61  LPDDGEIYWNGTDIRKLGV--DYRDVMTYLGHLGGIKDDLTAIENLRISCALAGCEIDED 120

Query: 121 KSLPSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLL 180
           ++  +L  +GL       AR+LS GQR+R+ LARLL     +W+LDEP  ALD   V+L+
Sbjct: 121 QAADALGQIGLAGREMLPARVLSQGQRRRVALARLLVTRTKLWILDEPLTALDVAAVELI 180

Query: 181 EYIIAEHRKKGGIVIVATH 197
           + I+  +  KGG+VI+ TH
Sbjct: 181 KGILEHNLAKGGMVIMTTH 197

[Close]

BLAST of Csor.00g204610 vs. NCBI nr
Match: XP_022936646.1 (ABC transporter I family member 1 [Cucurbita moschata] >XP_023539678.1 ABC transporter I family member 1 [Cucurbita pepo subsp. pepo] >KAG6596893.1 ABC transporter I family member 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030169.1 ABC transporter I family member 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 447 bits (1149), Expect = 4.25e-158
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL
Sbjct: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Csor.00g204610 vs. NCBI nr
Match: XP_023005528.1 (ABC transporter I family member 1 [Cucurbita maxima])

HSP 1 Score: 441 bits (1134), Expect = 8.23e-156
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLRKPPLPRLLLNQVSCMRNAQQILRNV+VSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVSVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS GEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGK GKSL
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGKSL 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Csor.00g204610 vs. NCBI nr
Match: XP_038903637.1 (ABC transporter I family member 1 [Benincasa hispida] >XP_038903638.1 ABC transporter I family member 1 [Benincasa hispida])

HSP 1 Score: 433 bits (1114), Expect = 9.21e-153
Identity = 218/229 (95.20%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLR+PPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRRPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS GEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGK G+S+
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGRSM 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+++LMGLGKLAKEKARMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRRMTLVDMLDR+DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 229

[Close]

BLAST of Csor.00g204610 vs. NCBI nr
Match: XP_022142995.1 (ABC transporter I family member 1 [Momordica charantia] >XP_022142996.1 ABC transporter I family member 1 [Momordica charantia])

HSP 1 Score: 428 bits (1100), Expect = 1.26e-150
Identity = 215/229 (93.89%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLR+P LPRLLLNQVSCMRNAQQILRNVNVSIHDG ALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRRPQLPRLLLNQVSCMRNAQQILRNVNVSIHDGGALVLTGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS GEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTV+DNVQWFEVLEGKQG S+
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVLDNVQWFEVLEGKQGGSM 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+++LMGLGKLAKEKARMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           +AEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRRMTLVDMLDR+DIS
Sbjct: 181 VAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 229

[Close]

BLAST of Csor.00g204610 vs. NCBI nr
Match: XP_008449132.1 (PREDICTED: ABC transporter I family member 1 [Cucumis melo] >KAA0055846.1 ABC transporter I family member 1 [Cucumis melo var. makuwa] >TYK24070.1 ABC transporter I family member 1 [Cucumis melo var. makuwa])

HSP 1 Score: 419 bits (1078), Expect = 2.83e-147
Identity = 210/229 (91.70%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLR PPLPRLLL+QVSCMRNAQQILRNVNVSIHDGSALVL+GTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRGPPLPRLLLDQVSCMRNAQQILRNVNVSIHDGSALVLSGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS G ILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFT+IDNVQWFEVLEGK G+S+
Sbjct: 61  RPSAGRILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTIIDNVQWFEVLEGKHGRSM 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+++LMGLG+LAKEKA+MLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGRLAKEKAKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPI IEDAMILRLPPRFPRR+TL DMLDR DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIDIEDAMILRLPPRFPRRITLADMLDRCDIS 229

[Close]

BLAST of Csor.00g204610 vs. ExPASy TrEMBL
Match: A0A6J1F833 (ABC transporter I family member 1 OS=Cucurbita moschata OX=3662 GN=LOC111443177 PE=4 SV=1)

HSP 1 Score: 447 bits (1149), Expect = 2.06e-158
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL
Sbjct: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Csor.00g204610 vs. ExPASy TrEMBL
Match: A0A6J1L2F3 (ABC transporter I family member 1 OS=Cucurbita maxima OX=3661 GN=LOC111498491 PE=4 SV=1)

HSP 1 Score: 441 bits (1134), Expect = 3.99e-156
Identity = 226/229 (98.69%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLRKPPLPRLLLNQVSCMRNAQQILRNV+VSIHDGSALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVSVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS GEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGK GKSL
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKHGKSL 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229

[Close]

BLAST of Csor.00g204610 vs. ExPASy TrEMBL
Match: A0A6J1CMH6 (ABC transporter I family member 1 OS=Momordica charantia OX=3673 GN=LOC111012986 PE=4 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 6.08e-151
Identity = 215/229 (93.89%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLR+P LPRLLLNQVSCMRNAQQILRNVNVSIHDG ALVLTGTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRRPQLPRLLLNQVSCMRNAQQILRNVNVSIHDGGALVLTGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS GEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTV+DNVQWFEVLEGKQG S+
Sbjct: 61  RPSAGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVLDNVQWFEVLEGKQGGSM 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+++LMGLGKLAKEKARMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGKLAKEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           +AEHRKKGGIVIVATHIPI+IEDAMILRLPPRFPRRMTLVDMLDR+DIS
Sbjct: 181 VAEHRKKGGIVIVATHIPIEIEDAMILRLPPRFPRRMTLVDMLDRSDIS 229

[Close]

BLAST of Csor.00g204610 vs. ExPASy TrEMBL
Match: A0A5A7UNI2 (ABC transporter I family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00400 PE=4 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 1.37e-147
Identity = 210/229 (91.70%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLR PPLPRLLL+QVSCMRNAQQILRNVNVSIHDGSALVL+GTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRGPPLPRLLLDQVSCMRNAQQILRNVNVSIHDGSALVLSGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS G ILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFT+IDNVQWFEVLEGK G+S+
Sbjct: 61  RPSAGRILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTIIDNVQWFEVLEGKHGRSM 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+++LMGLG+LAKEKA+MLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGRLAKEKAKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPI IEDAMILRLPPRFPRR+TL DMLDR DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIDIEDAMILRLPPRFPRRITLADMLDRCDIS 229

[Close]

BLAST of Csor.00g204610 vs. ExPASy TrEMBL
Match: A0A1S3BLD4 (ABC transporter I family member 1 OS=Cucumis melo OX=3656 GN=LOC103491084 PE=4 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 1.37e-147
Identity = 210/229 (91.70%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MSLR PPLPRLLL+QVSCMRNAQQILRNVNVSIHDGSALVL+GTNGSGKTTFLRMLAGFS
Sbjct: 1   MSLRGPPLPRLLLDQVSCMRNAQQILRNVNVSIHDGSALVLSGTNGSGKTTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           RPS G ILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFT+IDNVQWFEVLEGK G+S+
Sbjct: 61  RPSAGRILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTIIDNVQWFEVLEGKHGRSM 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+++LMGLG+LAKEKA+MLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDDDGVKLLEYI
Sbjct: 121 PAIELMGLGRLAKEKAKMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDDGVKLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 229
           IAEHRKKGGIVIVATHIPI IEDAMILRLPPRFPRR+TL DMLDR DIS
Sbjct: 181 IAEHRKKGGIVIVATHIPIDIEDAMILRLPPRFPRRITLADMLDRCDIS 229

[Close]

BLAST of Csor.00g204610 vs. TAIR 10
Match: AT1G63270.1 (non-intrinsic ABC protein 10 )

HSP 1 Score: 398.7 bits (1023), Expect = 3.2e-111
Identity = 194/229 (84.72%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MSLRKPPLPRLLLNQVSCMRNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFS 60
           MS+R+P +PRLLL  VSCMRNAQQILR+VNVS+HDG ALVLTGTNGSGK+TFLRMLAGFS
Sbjct: 1   MSIRRPQIPRLLLQNVSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFS 60

Query: 61  RPSTGEILWNGHDITESGVFHQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSL 120
           +PS GEILWNGHDIT+SG+F QYKLQLNW+SLKDAIKE FTV+DNVQWFE+LE K GK+ 
Sbjct: 61  KPSAGEILWNGHDITQSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQ 120

Query: 121 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 180
           P+L+LMGLG+L KEK+RMLSMGQRKRLQLARLLA+DRPIWLLDEPSVALDD+GV+LLEYI
Sbjct: 121 PALELMGLGRLVKEKSRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYI 180

Query: 181 IAEHRKKGGIVIVATHIPIKIEDAMILRLPPRFPRRMTLVDMLDRADIS 230
           IAEHRKKGGIVIVATH+PI IEDAMILRLPPRFPR+MTL+DMLDRADIS
Sbjct: 181 IAEHRKKGGIVIVATHLPIDIEDAMILRLPPRFPRKMTLIDMLDRADIS 229

[Close]

BLAST of Csor.00g204610 vs. TAIR 10
Match: AT1G67940.1 (non-intrinsic ABC protein 3 )

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-15
Identity = 60/184 (32.61%), Postives = 94/184 (51.09%), Query Frame = 0


Query: 21  NAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEILWNGHDITESGVF 80
           +  +IL+ V + I  G  + + G +GSGK+TFLR L     P    +  +G DIT   V 
Sbjct: 40  DGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVI 99

Query: 81  HQYKLQLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSLPSLQLMGLGKL----AKEKA 140
              + ++  L     + +  TV DNV++   L G++       +L+ L  L    AK+  
Sbjct: 100 -ALRRRVGMLFQLPVLFQG-TVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKKTG 159

Query: 141 RMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGGIVIVATH 200
             LS+GQ +R+ LAR LA +  + LLDEP+ ALD    + +E +I + +K+ GI  V   
Sbjct: 160 AELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTVIVS 219

[Close]

BLAST of Csor.00g204610 vs. TAIR 10
Match: AT3G62150.1 (P-glycoprotein 21 )

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-11
Identity = 57/194 (29.38%), Postives = 92/194 (47.42%), Query Frame = 0


Query: 20  RNAQQILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEILWNGHDITESGV 79
           R  +QI R  ++SI  GS + L G +GSGK+T + ++  F  P +GE+  +G ++ E   
Sbjct: 415 RPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEVRIDGINLKE--- 474

Query: 80  FHQYKLQLNWL----------------SLKDAI---KENFTVIDNVQWFEVLEGKQGKSL 139
                 QL W+                S+K+ I   KEN TV +  +  E+      K +
Sbjct: 475 -----FQLKWIRSKIGLVSQEPVLFTSSIKENIAYGKENATVEEIRKATEL--ANASKFI 534

Query: 140 PSLQLMGLGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYI 195
             L   GL  +  E    LS GQ++R+ +AR +  D  I LLDE + ALD +  ++++  
Sbjct: 535 DKLP-QGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERIVQEA 594

[Close]

BLAST of Csor.00g204610 vs. TAIR 10
Match: AT2G36910.1 (ATP binding cassette subfamily B1 )

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 49/171 (28.65%), Postives = 80/171 (46.78%), Query Frame = 0


Query: 24  QILRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEILWNGHDITESGVFHQY 83
           +IL N  +S+  G  + L G++GSGK+T + ++  F  P++G++L +G D+         
Sbjct: 384 KILNNFCLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVLLDGQDLK-------- 443

Query: 84  KLQLNWLS------------LKDAIKENFTV----IDNVQWFEVLEGKQGKSLPSLQLMG 143
            L+L WL                +IKEN  +     D V+  E        S       G
Sbjct: 444 TLKLRWLRQQIGLVSQEPALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDG 503

Query: 144 LGKLAKEKARMLSMGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLE 179
                 E+   LS GQ++R+ +AR +  +  I LLDE + ALD +  KL++
Sbjct: 504 FDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQ 546

[Close]

BLAST of Csor.00g204610 vs. TAIR 10
Match: AT2G41700.1 (ATP-binding cassette A1 )

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 49/178 (27.53%), Postives = 87/178 (48.88%), Query Frame = 0


Query: 26   LRNVNVSIHDGSALVLTGTNGSGKTTFLRMLAGFSRPSTGEILWNGHDITESGVFHQYKL 85
            ++++  S+  G      GTNG+GKTT L ML+G   P++G     G DI  S      + 
Sbjct: 1474 VQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGTAFIFGKDIVASP--KAIRQ 1533

Query: 86   QLNWLSLKDAIKENFTVIDNVQWFEVLEGKQGKSLPS-----LQLMGLGKLAKEKARMLS 145
             + +    DA+ E  TV ++++ +  ++G     + +     L    L K + + +  LS
Sbjct: 1534 HIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSHKPSFTLS 1593

Query: 146  MGQRKRLQLARLLALDRPIWLLDEPSVALDDDGVKLLEYIIAEHRKKGG--IVIVATH 197
             G +++L +A  +  D PI +LDEPS  +D    + +  +I+    + G   VI+ TH
Sbjct: 1594 GGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAVILTTH 1649

The following BLAST results are available for this feature:

BLAST of Csor.00g204610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8T1	4.6e-110	84.72	ABC transporter I family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCI1 PE=2 ...	[more]
Q2VZJ1	3.8e-32	38.69	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Magnetospirillum magn...	[more]
Q2Y9Q1	1.4e-29	37.56	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Nitrosospira multifor...	[more]
Q8XE58	8.8e-29	34.17	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Escherichia coli O157...	[more]
Q82WC8	8.8e-29	37.19	Cytochrome c biogenesis ATP-binding export protein CcmA OS=Nitrosomonas europaea...	[more]

BLAST of Csor.00g204610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936646.1	4.25e-158	100.00	ABC transporter I family member 1 [Cucurbita moschata] >XP_023539678.1 ABC trans...	[more]
XP_023005528.1	8.23e-156	98.69	ABC transporter I family member 1 [Cucurbita maxima]	[more]
XP_038903637.1	9.21e-153	95.20	ABC transporter I family member 1 [Benincasa hispida] >XP_038903638.1 ABC transp...	[more]
XP_022142995.1	1.26e-150	93.89	ABC transporter I family member 1 [Momordica charantia] >XP_022142996.1 ABC tran...	[more]
XP_008449132.1	2.83e-147	91.70	PREDICTED: ABC transporter I family member 1 [Cucumis melo] >KAA0055846.1 ABC tr...	[more]

BLAST of Csor.00g204610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F833	2.06e-158	100.00	ABC transporter I family member 1 OS=Cucurbita moschata OX=3662 GN=LOC111443177 ...	[more]
A0A6J1L2F3	3.99e-156	98.69	ABC transporter I family member 1 OS=Cucurbita maxima OX=3661 GN=LOC111498491 PE...	[more]
A0A6J1CMH6	6.08e-151	93.89	ABC transporter I family member 1 OS=Momordica charantia OX=3673 GN=LOC111012986...	[more]
A0A5A7UNI2	1.37e-147	91.70	ABC transporter I family member 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BLD4	1.37e-147	91.70	ABC transporter I family member 1 OS=Cucumis melo OX=3656 GN=LOC103491084 PE=4 S...	[more]

BLAST of Csor.00g204610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63270.1	3.2e-111	84.72	non-intrinsic ABC protein 10	[more]
AT1G67940.1	3.3e-15	32.61	non-intrinsic ABC protein 3	[more]
AT3G62150.1	3.8e-11	29.38	P-glycoprotein 21	[more]
AT2G36910.1	1.9e-10	28.65	ATP binding cassette subfamily B1	[more]
AT2G41700.1	3.2e-10	27.53	ATP-binding cassette A1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 35..223 e-value: 3.9E-15 score: 66.3
IPR005895	ABC transporter, haem export, CcmA	TIGRFAM	TIGR01189	TIGR01189	coord: 13..209 e-value: 7.3E-56 score: 186.9
IPR005895	ABC transporter, haem export, CcmA	PANTHER	PTHR43499	ABC TRANSPORTER I FAMILY MEMBER 1	coord: 9..223
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..207 e-value: 5.3E-41 score: 142.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..197
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 26..166 e-value: 7.6E-26 score: 91.3
IPR003439	ABC transporter-like, ATP-binding domain	PROSITE	PS50893	ABC_TRANSPORTER_2	coord: 11..228 score: 15.286259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g204610.m01	Csor.00g204610.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0009536	plastid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0022857	transmembrane transporter activity