Csor.00g204480 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCTCAAACCCCACCACCTCCACAAGGAAATCCTGCTTCCTCCAAGACGATGACGACGACGGCCTCGCCTCCTTCGCCGGCGACATGGAACCTGGCATCTCCGGCCACTGCTGCTTATCCAGAAGCTTCCGTAGTCTCTCCGCCGTCGCCTGCTCTAGACCTTCCCATTTCTTGGATTCCTGCTTCCTTTGCCGGAAGCCCCTTGGGAATAATACCGATATCTTCATGTACAGGTTCGTTGAGTTCTCTCTGATTATTTGGGGGATTTAGGGGAGTTTCTTTGATTCATGGGATTGTGTGGCTGGGATTTTCTTTCCGGGAAAATATTTGGTTCATATTTTCTCAGTAACCAAACAGGGATTTAGGGCTAAAATCATTTCGTTTCATAATTTGTACAGAGGAGACACACCATTCTGTAGCGAAGATTGTAGACAAGAACAAATTGAAATAGACGAAGCGAAAGAGAAAAAATGGAGAAGATCATCATCGGCCGCCATGAAAGCTCTGAGAAAAAAGGATCAACAAAGAAGAAGATCCGCTTCACCTAATAAGTCCTCTCCTCCGCCGGACTATCCTTTCCGCGCCGGCACCGTCGCCGCCGCTTAG ATGGATTCCTCAAACCCCACCACCTCCACAAGGAAATCCTGCTTCCTCCAAGACGATGACGACGACGGCCTCGCCTCCTTCGCCGGCGACATGGAACCTGGCATCTCCGGCCACTGCTGCTTATCCAGAAGCTTCCGTAGTCTCTCCGCCGTCGCCTGCTCTAGACCTTCCCATTTCTTGGATTCCTGCTTCCTTTGCCGGAAGCCCCTTGGGAATAATACCGATATCTTCATGTACAGAGGAGACACACCATTCTGTAGCGAAGATTGTAGACAAGAACAAATTGAAATAGACGAAGCGAAAGAGAAAAAATGGAGAAGATCATCATCGGCCGCCATGAAAGCTCTGAGAAAAAAGGATCAACAAAGAAGAAGATCCGCTTCACCTAATAAGTCCTCTCCTCCGCCGGACTATCCTTTCCGCGCCGGCACCGTCGCCGCCGCTTAG ATGGATTCCTCAAACCCCACCACCTCCACAAGGAAATCCTGCTTCCTCCAAGACGATGACGACGACGGCCTCGCCTCCTTCGCCGGCGACATGGAACCTGGCATCTCCGGCCACTGCTGCTTATCCAGAAGCTTCCGTAGTCTCTCCGCCGTCGCCTGCTCTAGACCTTCCCATTTCTTGGATTCCTGCTTCCTTTGCCGGAAGCCCCTTGGGAATAATACCGATATCTTCATGTACAGAGGAGACACACCATTCTGTAGCGAAGATTGTAGACAAGAACAAATTGAAATAGACGAAGCGAAAGAGAAAAAATGGAGAAGATCATCATCGGCCGCCATGAAAGCTCTGAGAAAAAAGGATCAACAAAGAAGAAGATCCGCTTCACCTAATAAGTCCTCTCCTCCGCCGGACTATCCTTTCCGCGCCGGCACCGTCGCCGCCGCTTAG MDSSNPTTSTRKSCFLQDDDDDGLASFAGDMEPGISGHCCLSRSFRSLSAVACSRPSHFLDSCFLCRKPLGNNTDIFMYRGDTPFCSEDCRQEQIEIDEAKEKKWRRSSSAAMKALRKKDQQRRRSASPNKSSPPPDYPFRAGTVAAA Homology
BLAST of Csor.00g204480 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-24 Identity = 74/164 (45.12%), Postives = 99/164 (60.37%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.1e-23 Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.5e-09 Identity = 29/50 (58.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of Csor.00g204480 vs. NCBI nr
Match: KAG6596906.1 (FCS-Like Zinc finger 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 298 bits (762), Expect = 9.13e-102 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of Csor.00g204480 vs. NCBI nr
Match: KAG7030182.1 (hypothetical protein SDJN02_08529 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 293 bits (751), Expect = 4.35e-100 Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of Csor.00g204480 vs. NCBI nr
Match: XP_023539662.1 (uncharacterized protein LOC111800279 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290 bits (741), Expect = 1.46e-98 Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of Csor.00g204480 vs. NCBI nr
Match: XP_022946559.1 (uncharacterized protein LOC111450557 [Cucurbita moschata]) HSP 1 Score: 284 bits (727), Expect = 1.99e-96 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Csor.00g204480 vs. NCBI nr
Match: XP_023005592.1 (uncharacterized protein LOC111498531 [Cucurbita maxima]) HSP 1 Score: 281 bits (718), Expect = 4.69e-95 Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy TrEMBL
Match: A0A6J1G458 (uncharacterized protein LOC111450557 OS=Cucurbita moschata OX=3662 GN=LOC111450557 PE=3 SV=1) HSP 1 Score: 284 bits (727), Expect = 9.63e-97 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy TrEMBL
Match: A0A6J1KTK0 (uncharacterized protein LOC111498531 OS=Cucurbita maxima OX=3661 GN=LOC111498531 PE=3 SV=1) HSP 1 Score: 281 bits (718), Expect = 2.27e-95 Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy TrEMBL
Match: A0A6J1HL26 (uncharacterized protein LOC111465132 OS=Cucurbita maxima OX=3661 GN=LOC111465132 PE=3 SV=1) HSP 1 Score: 210 bits (535), Expect = 2.38e-67 Identity = 116/158 (73.42%), Postives = 122/158 (77.22%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy TrEMBL
Match: A0A6J1E6I6 (uncharacterized protein LOC111431226 OS=Cucurbita moschata OX=3662 GN=LOC111431226 PE=3 SV=1) HSP 1 Score: 204 bits (518), Expect = 9.22e-65 Identity = 116/158 (73.42%), Postives = 123/158 (77.85%), Query Frame = 0
BLAST of Csor.00g204480 vs. ExPASy TrEMBL
Match: A0A5A7V4X5 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18110G00010 PE=3 SV=1) HSP 1 Score: 200 bits (508), Expect = 2.14e-63 Identity = 112/152 (73.68%), Postives = 120/152 (78.95%), Query Frame = 0
BLAST of Csor.00g204480 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 112.5 bits (280), Expect = 3.0e-25 Identity = 74/164 (45.12%), Postives = 99/164 (60.37%), Query Frame = 0
BLAST of Csor.00g204480 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 108.6 bits (270), Expect = 4.3e-24 Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 0
BLAST of Csor.00g204480 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 91.3 bits (225), Expect = 7.1e-19 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of Csor.00g204480 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Csor.00g204480 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 62.0 bits (149), Expect = 4.6e-10 Identity = 29/50 (58.00%), Postives = 33/50 (66.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|