Csor.00g201640 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGGGGCAACGTTACTGCAGAGGATCTGATCGACGCGCTTCGAGAGGTTGATTGGTCATCGCCTCCTCGACCTATCTCCGAGTTCTTCTCTAGATTCACGGTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAATGCAATCTCTATTAGTATGATTACTCTTTCCTTCAATTTATTCGAGTTACTGTATCTTTTTCTATTCTTAGCCACAATTTTTTTTTTCTTAGGGTCATGATTGTTTGAGTGAGAAAAATTTACACACTGCGTAGTGCTTCTAATTGTAACGCCCTCCATATCGGTTTAGTTCGGTTTCATGAATCGAGTCCATAAGGAGCTATACGCTTTGGAAGCGAAATGGAATTTGATTACGCGGCTGCTTGAGTTAGTTAATTTGCTAGTTAATCAAACATGCCGAAATCTATAGCTGCATTGCTCATTTTATTTCTTTCAGTTTTCCTAGGAAATCGTGTCGTGAGTAATGCGTGACCAAAATAGTCGATCATGGCCTGTTTTAATTTACTTGTTAGACAAACATGCTGAAACCTATATTATGTTATTTCATTTTGTTGCTATGCAGTGCCTCGTTCACCCTACTAATTTGGAATCTTATTTTCTTGCATTTGCAGTTACCGAACAAACTACTTCATTATGATTGTTTTCATTCTTGGTGAGTGTGTAAACTGTCATATTTCTGCATTATGTGCATACATTTCTTCTTATTGTTTAAAAATATATACAGTTTTTCCTTAACTGTGGATTGTTGATTACAGCCCTGGGCTTTCTACGAAGGCCTCTTGCTATTGTTGCTGCTTTTCTCACGGCACTCAGCATCGCTTTTCTGAATGACAGGTGAGCTGATGGCCTGATATACACACTGCAGAGGACAATTAATATCATTAGCCTTTCTTGTGATGGGACTGTCGTTTATTATTTGGCCTCAAGTTTCTTCACACGGGATTGCATATATTTATTCTTTGGTGTTGTTTTCATCAAAATACCTTTCTTTGCTTTCACTTGTTATCCAGAGAATCAGGATTTATACGTACAATTTTTTTGCCAACGTATTATGATACTCTTTGTACCAGTTGATCAAGGAGTCATGTGTTAACATGTAGATAATGTTGTGACGTGCATGGATTCTTTATTTTAACTCCATGTGAAGTTTGTTGTGACTGCCATATTTTTCTTCAAACATAATTTCTTTTTACCACAGTTTTGCAGGCACATTTAGTGAAAAAGTAACCAGAACTGTTAGACAATTCTCTCCACATTTGGCTGCAAAGATGAGACCTCCTCTCACGTAGGTATCTTCATCAATTTCCATGAATGCAATAAGCCATGACTTCTGATTTCATATTTCTTACATAATCTTTCAGGCCTGTTATCCGTGGACGCCCGTCAGCTAAAAGAGCAATATACATATGTGGACGTCCTCGATGGGTTTTTGTCTTGATGTTCTCTTCTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTTATCTATTATTGGTATGCTTCCATATAATTATAGAGGACCCAGTTCACCTTTGTTTAAGTACAGATATTATCTTGGAGTGCATCTTTCTAATCAGACCTTTTATGATTTTTGAATTTTGAATTTTAACATTATATATCTTTTATGCTTTAAGTTTTCTGATTTATTTTCCCCATCTGATGTAGTGAGTTTCTTACTCTGGTTCATTTCTTGCGGTTTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGGTATGTTAGCTGCTTATAAAGATTTTTTTTCTTCTTTTTTTGCTTTTCTAAGTCTTGTACTTCATGGTTGATTTTCTCACCCCCTCCACCCCAACAATTATTTCAGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCACGTCTAAACACATTCCGTGAGGAATTCCGTGCTGTCTGGCGCAATTATAGTGAACTGTAGTCATCTAGACTTCATAGAATGTGAGTATATTCTGCCTTCATTTTTATACTTGCTGTTTTGAAGTTTGTTGCTTCAAATGCATCTCCAAGTGTGTATGCTATTAATTTTTATTTTTGTTAATTTCTACAAGGAATCGTTCTCTTTTGATTTCTTATATTTAGGGGTCATTGTGGGAATTGGGAAGTCTATGATGCATTTGGTTTGTAATCTTAAACCAGAAATTTGAAAATAAGGGATTAAATTAAAAAAGAACAAAAAAAAAAGTTTTTCTAAAATAAATGATGAAATTGAATTTCAATTTAAAAAGTTTCTCAAAGTATGTTCAGAAATATATTTGTAAACAACAAAAATAATTGTAGTCACTTACTAAATATTTAGCTTTTTCTAAAATATTATTAATTAATTTATTAACATATTGATATTATAAATTTTGTAAAGTAACTATGATAATTTATAATATGTTATGCAATACTTGTTTTAATATTAACAAAAATGAAATGAGTTTTAAGCATGGAATAGTATATTTATAAAAGAACTTATAATTTGTAGTATAATTCTCCATTTTCAAATTTTGAATGTGAAGAGAATTTTCACCATTTGAATCACAAAATTAAAAAAATAGTTGTATAAGACAAATCTTTCAAACAAAGATTGAGTGAACTGGAACAAGTAATAGATTCTGCATTGCATATTAAACATTCGCTCAGAGCTTTAGGTCCAAGAACTGTCGATTTATTGCGTGTGATATTCATTGTTATTCTCCTATTATCTGTAGCCACTGTAGAGTTCTTGTAATCTCCTCTCCTCAGTAGGGTGTATATCACATCTTTTTATCGACGGAAGTTCGTTAACCTTTTAAAAGAAAAGCTATCATGTAGTCTTTGTGTTGTTAACTTTATGGCTTCTTTTTGGAAATTTATTATGTTTGAACTTAGAACTAGAACTTCACTGATGTTATGATTCTTGTTATGTTCTCCCATACGAGATCACATCTAGTTGTTGGAAAATTAATGTTGCACATTAAAGAATGTAATGGATGGCGGTATTTGCTAATAATTGATAGGTAAAAGATAGTTGTGACAGTCCAAAATTTTAAGGCACTGCAATGATAGCGTGAGTTTGTATTTGTGTTACCTCAATTAGTTATTAGAGTATTATATTTAATTGATTAAATCTAAACTTCATACTGAAGTTCTGATCATTTTCTTACAAAGATTCCCCCCCTCTCTTAGTTGGGGAATTGGAAGCTTTTAAGTAAGGCTTCTTCTAATGAAAAACTATTTTTCACTGCAAGTTGAATCATATGTAGTAGACAAATGACTGGTAAAATTCTCTTGATTGCTATGCTTGCATGTGAATTTGGTGAGTTGCAGTCAGAAAAATGTTCTAATTAAGACTTTACGGCGAGGCCATTCAATCTCAGATGTCTTTCGTCCATCTGGCATTCTTATGCCAGATGCAATGCCGAAAACAATATATTCTGCCATTATGTTTCGTATAAAGTAATAACATGAGCAATAGTTCATCATTCAAGTATCATAGAAATAGATCAATAATGTATTATGCTGTTTCTTCAGTCCTTTGTCGTCTGCTTCTACTTGATAATTTTGTTTTGGATTATATTGCTTTCGCTGATTGAATAAATCTGATGTAAGCTTGCTACTACTAAGATTGGTATTAACTATAATAATCTGTCCATCTGTACAGGCGTCCTCTGTTAA ATGGATTGGGGCAACGTTACTGCAGAGGATCTGATCGACGCGCTTCGAGAGGTTGATTGGTCATCGCCTCCTCGACCTATCTCCGAGTTCTTCTCTAGATTCACGGTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAATGCAATCTCTATTATTACCGAACAAACTACTTCATTATGATTGTTTTCATTCTTGCCCTGGGCTTTCTACGAAGGCCTCTTGCTATTGTTGCTGCTTTTCTCACGGCACTCAGCATCGCTTTTCTGAATGACAGTTTTGCAGGCACATTTAGTGAAAAAGTAACCAGAACTGTTAGACAATTCTCTCCACATTTGGCTGCAAAGATGAGACCTCCTCTCACGCCTGTTATCCGTGGACGCCCGTCAGCTAAAAGAGCAATATACATATGTGGACGTCCTCGATGGGTTTTTGTCTTGATGTTCTCTTCTGTGAGTTTCTTACTCTGGTTCATTTCTTGCGGTTTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCACGTCTAAACACATTCCACTTCATAGAATGCGTCCTCTGTTAA ATGGATTGGGGCAACGTTACTGCAGAGGATCTGATCGACGCGCTTCGAGAGGTTGATTGGTCATCGCCTCCTCGACCTATCTCCGAGTTCTTCTCTAGATTCACGGTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAATGCAATCTCTATTATTACCGAACAAACTACTTCATTATGATTGTTTTCATTCTTGCCCTGGGCTTTCTACGAAGGCCTCTTGCTATTGTTGCTGCTTTTCTCACGGCACTCAGCATCGCTTTTCTGAATGACAGTTTTGCAGGCACATTTAGTGAAAAAGTAACCAGAACTGTTAGACAATTCTCTCCACATTTGGCTGCAAAGATGAGACCTCCTCTCACGCCTGTTATCCGTGGACGCCCGTCAGCTAAAAGAGCAATATACATATGTGGACGTCCTCGATGGGTTTTTGTCTTGATGTTCTCTTCTGTGAGTTTCTTACTCTGGTTCATTTCTTGCGGTTTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCACGTCTAAACACATTCCACTTCATAGAATGCGTCCTCTGTTAA MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLMFSSVSFLLWFISCGLLTVLWSLAFGLLATLLHASFRTPNLKARLNTFHFIECVLC Homology
BLAST of Csor.00g201640 vs. ExPASy Swiss-Prot
Match: Q9LZM7 (PRA1 family protein A1 OS=Arabidopsis thaliana OX=3702 GN=PRA1A1 PE=2 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 5.1e-81 Identity = 154/195 (78.97%), Postives = 167/195 (85.64%), Query Frame = 0
BLAST of Csor.00g201640 vs. ExPASy Swiss-Prot
Match: Q8GWC3 (PRA1 family protein A2 OS=Arabidopsis thaliana OX=3702 GN=PRA1A2 PE=2 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 6.7e-73 Identity = 130/195 (66.67%), Postives = 159/195 (81.54%), Query Frame = 0
BLAST of Csor.00g201640 vs. ExPASy Swiss-Prot
Match: Q8W115 (PRA1 family protein A3 OS=Arabidopsis thaliana OX=3702 GN=PRA1A3 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 9.7e-72 Identity = 134/195 (68.72%), Postives = 160/195 (82.05%), Query Frame = 0
BLAST of Csor.00g201640 vs. NCBI nr
Match: KAG6596390.1 (PRA1 family protein A1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 404 bits (1037), Expect = 6.90e-142 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Csor.00g201640 vs. NCBI nr
Match: XP_022934951.1 (PRA1 family protein A1-like [Cucurbita moschata] >KAG7027936.1 PRA1 family protein A1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 384 bits (987), Expect = 3.59e-134 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g201640 vs. NCBI nr
Match: XP_023540053.1 (PRA1 family protein A1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 384 bits (986), Expect = 5.11e-134 Identity = 194/195 (99.49%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g201640 vs. NCBI nr
Match: XP_022971503.1 (PRA1 family protein A1-like [Cucurbita maxima]) HSP 1 Score: 380 bits (977), Expect = 1.20e-132 Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0
BLAST of Csor.00g201640 vs. NCBI nr
Match: XP_008442509.1 (PREDICTED: PRA1 family protein A1-like [Cucumis melo] >KAA0044118.1 PRA1 family protein A1-like [Cucumis melo var. makuwa]) HSP 1 Score: 380 bits (976), Expect = 1.71e-132 Identity = 190/195 (97.44%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g201640 vs. ExPASy TrEMBL
Match: A0A6J1F385 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111441962 PE=3 SV=1) HSP 1 Score: 384 bits (987), Expect = 1.74e-134 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g201640 vs. ExPASy TrEMBL
Match: A0A6J1I718 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111470201 PE=3 SV=1) HSP 1 Score: 380 bits (977), Expect = 5.82e-133 Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0
BLAST of Csor.00g201640 vs. ExPASy TrEMBL
Match: A0A5A7TML8 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004700 PE=3 SV=1) HSP 1 Score: 380 bits (976), Expect = 8.27e-133 Identity = 190/195 (97.44%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g201640 vs. ExPASy TrEMBL
Match: A0A1S3B6M0 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486359 PE=3 SV=1) HSP 1 Score: 380 bits (976), Expect = 8.27e-133 Identity = 190/195 (97.44%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of Csor.00g201640 vs. ExPASy TrEMBL
Match: A0A0A0LFH8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G733900 PE=3 SV=1) HSP 1 Score: 379 bits (973), Expect = 2.37e-132 Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of Csor.00g201640 vs. TAIR 10
Match: AT5G02040.1 (prenylated RAB acceptor 1.A1 ) HSP 1 Score: 302.0 bits (772), Expect = 3.7e-82 Identity = 154/195 (78.97%), Postives = 167/195 (85.64%), Query Frame = 0
BLAST of Csor.00g201640 vs. TAIR 10
Match: AT5G02040.2 (prenylated RAB acceptor 1.A1 ) HSP 1 Score: 302.0 bits (772), Expect = 3.7e-82 Identity = 154/195 (78.97%), Postives = 167/195 (85.64%), Query Frame = 0
BLAST of Csor.00g201640 vs. TAIR 10
Match: AT5G05987.1 (prenylated RAB acceptor 1.A2 ) HSP 1 Score: 275.0 bits (702), Expect = 4.8e-74 Identity = 130/195 (66.67%), Postives = 159/195 (81.54%), Query Frame = 0
BLAST of Csor.00g201640 vs. TAIR 10
Match: AT3G11397.1 (prenylated RAB acceptor 1.A3 ) HSP 1 Score: 271.2 bits (692), Expect = 6.9e-73 Identity = 134/195 (68.72%), Postives = 160/195 (82.05%), Query Frame = 0
BLAST of Csor.00g201640 vs. TAIR 10
Match: AT3G11402.2 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 271.2 bits (692), Expect = 6.9e-73 Identity = 134/195 (68.72%), Postives = 160/195 (82.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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