Csor.00g192500 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCAAAGAAGCGGGAGGCTCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGACGCCGGCGGTGATCTGAGTGGTGGCTAG ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCAAAGAAGCGGGAGGCTCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGACGCCGGCGGTGATCTGAGTGGTGGCTAG ATGGAGGGATACCGAACGCCGGAGCGACAGGAGTTTCGAATTCAGCCGGCAAAGGTGCCACCGCCGCCGCCGAGGAAAAAGGCGGTTGCGGCGGCAAAGAAGCGGGAGGCTCCAGCGAATGGATATTTTCAACTGCCTGACGATCTTGAAGTATATTTTTTAGTGGTTCCTAGAGTGGACGCCGGCGGTGATCTGAGTGGTGGCTAG MEGYRTPERQEFRIQPAKVPPPPPRKKAVAAAKKREAPANGYFQLPDDLEVYFLVVPRVDAGGDLSGG Homology
BLAST of Csor.00g192500 vs. ExPASy Swiss-Prot
Match: Q1JPP8 (Cyclin-dependent protein kinase inhibitor SMR4 OS=Arabidopsis thaliana OX=3702 GN=SMR4 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 8.2e-07 Identity = 31/60 (51.67%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Csor.00g192500 vs. NCBI nr
Match: KAG6607256.1 (Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 140 bits (353), Expect = 6.54e-42 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Csor.00g192500 vs. NCBI nr
Match: KAG7036940.1 (Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135 bits (341), Expect = 4.44e-40 Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 0
BLAST of Csor.00g192500 vs. NCBI nr
Match: KAF8022732.1 (hypothetical protein BT93_F0293 [Corymbia citriodora subsp. variegata]) HSP 1 Score: 68.2 bits (165), Expect = 4.25e-13 Identity = 33/57 (57.89%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of Csor.00g192500 vs. NCBI nr
Match: KAA0067757.1 (hypothetical protein E6C27_scaffold352G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 1.10e-12 Identity = 36/57 (63.16%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Csor.00g192500 vs. NCBI nr
Match: XP_030542538.1 (cyclin-dependent protein kinase inhibitor SMR4 [Rhodamnia argentea]) HSP 1 Score: 64.7 bits (156), Expect = 6.83e-12 Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of Csor.00g192500 vs. ExPASy TrEMBL
Match: A0A5A7VKP1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00780 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 5.32e-13 Identity = 36/57 (63.16%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Csor.00g192500 vs. ExPASy TrEMBL
Match: A0A059D4M4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B02319 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.39e-12 Identity = 32/57 (56.14%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of Csor.00g192500 vs. ExPASy TrEMBL
Match: W9RUH3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_025279 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 6.83e-12 Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of Csor.00g192500 vs. ExPASy TrEMBL
Match: A0A7I8K045 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_01001718 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.64e-11 Identity = 34/60 (56.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Csor.00g192500 vs. ExPASy TrEMBL
Match: A0A2I0B604 (Uncharacterized protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash017695 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 5.88e-11 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0
BLAST of Csor.00g192500 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 5.8e-08 Identity = 31/60 (51.67%), Postives = 36/60 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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