Csor.00g188110 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g188110
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	TRAF-type domain-containing protein
Location	Csor_Chr07: 7679464 .. 7681597 (+)
RNA-Seq Expression	Csor.00g188110
Synteny	Csor.00g188110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTAATGGTTTTTGGCCGCTTGATAGGAGAGAAGCAATTGCTCAAGTTCTGCTTAAGAATGTAGATTTTAAGAACGAGTTTCATTGTGACCAGAAATTTCACTCTGTAGAAGAGTTAGCTGAACATGTTGTAAACTGTGGATTTAGGTCTCTAATCTGCACAAATGAAGGCTGCTGTGCTACATTTTGTGCAAACCACGCAGAACAGCATGATTCAATTTGCCCCTTCAAGATAATTCTGTGTGAACAGAAGTGTTCTGCCTTCATTATGAGACGCGAAATGGATCGCCATTGCATAACTGTTTGTCCTATGAAGCTTGTGAACTGCCCCTTCCATAATTTGGGTTGTCAATCCCCTGTTCCTTACAGTTTGATATCGCAGCATTGTTCAGAGAGTTTTGATTCTCATTTGCTGCTTATTCTTCACTCTGTTCACAAGGAGGCAAATGAAGAGACTCTTAAACATAGACGGCAACAGCTTGAAGAGGTGAGATTTACAGATTTGTTTGAATTCATTTATAATTCTTAAATGGGCTTTTATTTTTGCTGAATCAATGGACACCAAAGTGTGCATATATCAAAATGTGAGTTCACTGTCTATTTGAGATCCCACATTAGTTGGGGAGGAGAACGAAACACCATTTATAAGGCGGTGGAAACCTATCCCTAGTAGACACGTTTTAAAAATCTTGAGGGGAAGTCCGAAAGAGAAAACCCAAAGAGGACAATATTTGTTATCGGTGGGCTTGGGATGTTACAAATGGTATCAGAGCCAGACATTATTGGGCGATGTGCCAGCGAGGAGTCTGAGCCTTGAAGGGGGTGGATTGGGGTCCCACATTGATTGGAGAAGGGAACGAGTGTCAGCGAGAACACTGGGCCCTAAAGGGGGGTGGATCGTGAGATCCCACATTGGTTGGAGAGGAAAACGAAACACCATTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCATTTCAGAAACTTTGAGGGGAAGCTTGAAAGGGAAAGCCCAAAGAGGACAACATCGGTTAGCGGTGGGCTTGAGATGTTACAATCTATTATTTAACGACTTTTGTCATGCCATATCGAATATATGAAATGATATTCTTTTGCTACTCGAATGTGTAAGCTTGATTTGTTAATTGCTGATTTTTTTGGCTGCCCAAATCTTGGTATAACCTCAGAAATACTATGAATGATGCAAGCATTTCCTATCTATATGGAAAACTGCAAGATAACTGAATGGGTATTATGCTATGAAATTATTTGTTAATCGATGTGATTCATTATTCTGGTGTGGCTTTCTCTGTAATTTTCCACATACTATTTTCAATTTGCATAAGATGTTAGATGAATCATACATGCTTAGTGTAAGAACTACACTAAGCCACCGCGAGTAGATATTGTTTTCTTTGGGCTTTCCCTTCCAAACTAGTTCCTCAAGGTTTTAAAACGCATCCACTAAGGAGAGGTTTCCACATCCTTATAAGGAATGTTTTGTCTCTCCTCTCCAACCGACGTAGGATCTCACACTTAGAACATCCTGAAATTATGAAATATATAGCTAGTGAAGTTTCTCCCCTTGTCTTTGCTTTCTGGACAAAGGTTAACTAGTTGAGAAGGAAGGGGGATTCAAGCTGTTAAGTTGAGAATAGATTAAGCTGCATTATCATCAATTACTTGTATCTTCTTGTCTATTCTAATTACAGTTCTAATGATTCTTCCCCAGGCATCATCACTTGACTACCTTAGAGGGCTCCAAAATCTGCGATTGTTAACCTCGAAAATCAAAGAACTGGATTCTAAGCTAGGACCATTAGTAGTCATTGGCACGAAGGAGGACACTGAAGAAGCGAAGGACGATGCGTCTAGTAAAACTGATGAAGAGAAGGACAAGTCTAATGTAACGGACGAAAAGAAGGGCGTGCCTACTGCAACAGAAGAAACGAAGGACGACGCATCTATTGTAACAACTGAAGAACCGAACGATGCTTCTAAGGCCTCGGAAGAAACGGAGGATGCTTCTAAGACAACGGAAGAACCAAACGATGCTTCTAAGGCAACGGAAGAAAGGAAGAGCGGTTCAAATGTAGTAAGAAATGATTCAGATGAAGCTGAAAGATAA

mRNA sequence

ATGGATGTTAATGGTTTTTGGCCGCTTGATAGGAGAGAAGCAATTGCTCAAGTTCTGCTTAAGAATGTAGATTTTAAGAACGAGTTTCATTGTGACCAGAAATTTCACTCTGTAGAAGAGTTAGCTGAACATGTTGTAAACTGTGGATTTAGGTCTCTAATCTGCACAAATGAAGGCTGCTGTGCTACATTTTGTGCAAACCACGCAGAACAGCATGATTCAATTTGCCCCTTCAAGATAATTCTGTGTGAACAGAAGTGTTCTGCCTTCATTATGAGACGCGAAATGGATCGCCATTGCATAACTGTTTGTCCTATGAAGCTTGTGAACTGCCCCTTCCATAATTTGGGTTGTCAATCCCCTGTTCCTTACAGTTTGATATCGCAGCATTGTTCAGAGAGTTTTGATTCTCATTTGCTGCTTATTCTTCACTCTGTTCACAAGGAGGCAAATGAAGAGACTCTTAAACATAGACGGCAACAGCTTGAAGAGGCATCATCACTTGACTACCTTAGAGGGCTCCAAAATCTGCGATTGTTAACCTCGAAAATCAAAGAACTGGATTCTAAGCTAGGACCATTAGTAGTCATTGGCACGAAGGAGGACACTGAAGAAGCGAAGGACGATGCGTCTAGTAAAACTGATGAAGAGAAGGACAAGTCTAATGTAACGGACGAAAAGAAGGGCGTGCCTACTGCAACAGAAGAAACGAAGGACGACGCATCTATTGTAACAACTGAAGAACCGAACGATGCTTCTAAGGCCTCGGAAGAAACGGAGGATGCTTCTAAGACAACGGAAGAACCAAACGATGCTTCTAAGGCAACGGAAGAAAGGAAGAGCGGTTCAAATGTAGTAAGAAATGATTCAGATGAAGCTGAAAGATAA

Coding sequence (CDS)

ATGGATGTTAATGGTTTTTGGCCGCTTGATAGGAGAGAAGCAATTGCTCAAGTTCTGCTTAAGAATGTAGATTTTAAGAACGAGTTTCATTGTGACCAGAAATTTCACTCTGTAGAAGAGTTAGCTGAACATGTTGTAAACTGTGGATTTAGGTCTCTAATCTGCACAAATGAAGGCTGCTGTGCTACATTTTGTGCAAACCACGCAGAACAGCATGATTCAATTTGCCCCTTCAAGATAATTCTGTGTGAACAGAAGTGTTCTGCCTTCATTATGAGACGCGAAATGGATCGCCATTGCATAACTGTTTGTCCTATGAAGCTTGTGAACTGCCCCTTCCATAATTTGGGTTGTCAATCCCCTGTTCCTTACAGTTTGATATCGCAGCATTGTTCAGAGAGTTTTGATTCTCATTTGCTGCTTATTCTTCACTCTGTTCACAAGGAGGCAAATGAAGAGACTCTTAAACATAGACGGCAACAGCTTGAAGAGGCATCATCACTTGACTACCTTAGAGGGCTCCAAAATCTGCGATTGTTAACCTCGAAAATCAAAGAACTGGATTCTAAGCTAGGACCATTAGTAGTCATTGGCACGAAGGAGGACACTGAAGAAGCGAAGGACGATGCGTCTAGTAAAACTGATGAAGAGAAGGACAAGTCTAATGTAACGGACGAAAAGAAGGGCGTGCCTACTGCAACAGAAGAAACGAAGGACGACGCATCTATTGTAACAACTGAAGAACCGAACGATGCTTCTAAGGCCTCGGAAGAAACGGAGGATGCTTCTAAGACAACGGAAGAACCAAACGATGCTTCTAAGGCAACGGAAGAAAGGAAGAGCGGTTCAAATGTAGTAAGAAATGATTCAGATGAAGCTGAAAGATAA

Protein sequence

MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGCCATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQSPVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLLTSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDDASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSDEAER

Homology

[Close]

BLAST of Csor.00g188110 vs. ExPASy Swiss-Prot
Match: B5DF45 (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 35/131 (26.72%), Postives = 59/131 (45.04%), Query Frame = 0


Query: 27  NEFHCD---------QKFHSVEELAEHVV-NCGFRSLICTNEGCCATFCANHAEQHDSIC 86
           ++ HC+         Q+F    ++ +H++ +C  R + C N  C         E HD  C
Sbjct: 151 HQVHCEFALVICPQCQRFFQKCQINKHIIEDCPRRQVSCVN--CAVPMPYEEKEIHDQSC 210

Query: 87  PFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQSPVPYSLISQHCSESFD 146
           P   I+CE  C   ++R +M  H    CP   V C F   GC   +  + +++H  E+  
Sbjct: 211 PLANIICEY-CGTILIREQMPNHYDLDCPTAPVPCTFSVFGCHEKMQRNHLARHLQENTQ 270

Query: 147 SHLLLILHSVH 148
            H+ L+  +VH
Sbjct: 271 LHMRLLAQAVH 278

[Close]

BLAST of Csor.00g188110 vs. ExPASy Swiss-Prot
Match: Q557K0 (TNF receptor-associated factor family protein DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0273433 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.3e-08
Identity = 56/205 (27.32%), Postives = 88/205 (42.93%), Query Frame = 0


Query: 21  KNVDFKNE-FHCDQ---KFHSVEELAEHVVNCGFRSLICTNEG--CCATFCANHAEQHD- 80
           K   F+ E  HC+    +   VE L  H+  C ++ + C N    C      N  E H+ 
Sbjct: 103 KESKFQGEAVHCENGCPEILKVELLEHHLKECQYQFIKCPNNSNKCKYIIRKNQIEHHNQ 162

Query: 81  SICPFKIILCEQ--------------------------KCSAFIMRREMDRHCITVCPMK 140
           S+C + +I CE+                          KCSA I ++ M+ H  T CPM+
Sbjct: 163 SVCDYSLIQCEKCSELIERKKLNKHIESECDTLMITCSKCSASIGKKLMNHHLETDCPME 222

Query: 141 LVNCPFHNLGCQSPVPYSLISQHCSESFDSHLLLI--LHSVHK----EANEETLKHRRQQ 187
            ++C +   GC      S +SQH SE+ ++H+  I  +  +HK    E N++  K  +Q 
Sbjct: 223 EISCLYKAGGCNKRFLRSQLSQHLSEN-NNHIFYIQNVMDLHKLQLDECNQDYRKLEKQN 282

[Close]

BLAST of Csor.00g188110 vs. ExPASy Swiss-Prot
Match: Q9BUZ4 (TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN=TRAF4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-07
Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 41  LAEHVVN-CGFRSLICTNEGCCATFCANHAEQHDSICPFKIILCEQKCS-AFIMRREMDR 100
           LA+H  + C  R+  CT   C   F  +  + H   CP   + C  +C    + R ++  
Sbjct: 180 LAQHATSECPKRTQPCTY--CTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPG 239

Query: 101 HCITVCPMKLVNCPFHNLGCQSPVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHR 160
           H    C   LV CPF + GC+   P   +++H  ES   HL ++   V ++  E  L+  
Sbjct: 240 HLKDSCNTALVLCPFKDSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQE--LQEL 299

Query: 161 RQQLEEAS 167
           R++LEE S
Sbjct: 300 RRELEELS 303

[Close]

BLAST of Csor.00g188110 vs. ExPASy Swiss-Prot
Match: Q54FG0 (TNF receptor-associated factor family protein DDB_G0290883 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290883 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.1e-07
Identity = 28/100 (28.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 31  CDQKFHSVEELAEHVVNCGFRSLICTNEGCCATFCANHAEQHDSICPFKIILCEQKCSAF 90
           C +K   V+++  H++NC ++ + C+ +GC      N  E H + C FK+++C+      
Sbjct: 130 CKEKI-EVDQIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVICDFCKRDD 189

Query: 91  IMRREMDRHCITVCPMKLVNCPFHNLGCQSPVPYSLISQH 131
           I ++E++ H  T CPM  ++C   + GC   +    I  H
Sbjct: 190 IKKKELETHYKT-CPMVPIDC---SQGCSVKIERKSIIDH 224

[Close]

BLAST of Csor.00g188110 vs. ExPASy Swiss-Prot
Match: P11467 (RING finger protein DG17 OS=Dictyostelium discoideum OX=44689 GN=zfaA PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 28/100 (28.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 31  CDQKFHSVEELAEHVVNCGFRSLICTNEGCCATFCANHAEQHDSICPFKIILCEQKCSAF 90
           C +K   V+++  H++NC ++ + C+ +GC      N  E H + C FK++ C+      
Sbjct: 130 CKEKI-EVDQIDSHLINCQYKFVTCSFKGCEKILRMNSLESHQNECGFKLVTCDFCKRDD 189

Query: 91  IMRREMDRHCITVCPMKLVNCPFHNLGCQSPVPYSLISQH 131
           I ++E++ H  T CPM  ++C   + GC   +    I  H
Sbjct: 190 IKKKELETHYKT-CPMVPIDC---SQGCSVKIERKSIIDH 224

[Close]

BLAST of Csor.00g188110 vs. NCBI nr
Match: KAG6595647.1 (TNF receptor-associated factor 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 570 bits (1469), Expect = 1.14e-204
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
           CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS
Sbjct: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL
Sbjct: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD
Sbjct: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240

Query: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSDEAER 295
           ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSDEAER
Sbjct: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSDEAER 295

[Close]

BLAST of Csor.00g188110 vs. NCBI nr
Match: KAG7027608.1 (hypothetical protein SDJN02_11622 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 566 bits (1459), Expect = 9.39e-201
Identity = 293/295 (99.32%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
           CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS
Sbjct: 212 CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRR QLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRHQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVP ATEETKDD
Sbjct: 332 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPNATEETKDD 391

Query: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSDEAER 295
           ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSDEAER
Sbjct: 392 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSDEAER 446

[Close]

BLAST of Csor.00g188110 vs. NCBI nr
Match: XP_022925059.1 (uncharacterized protein LOC111432420 isoform X1 [Cucurbita moschata])

HSP 1 Score: 543 bits (1400), Expect = 6.03e-192
Identity = 280/284 (98.59%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
           CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS
Sbjct: 212 CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSN TDEKKGVP ATEETKDD
Sbjct: 332 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNATDEKKGVPNATEETKDD 391

Query: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSN 284
           ASIVTTEEPNDASKA EETEDASKTTEEPNDASKATEE KSGSN
Sbjct: 392 ASIVTTEEPNDASKALEETEDASKTTEEPNDASKATEETKSGSN 435

[Close]

BLAST of Csor.00g188110 vs. NCBI nr
Match: XP_022925060.1 (uncharacterized protein LOC111432420 isoform X2 [Cucurbita moschata])

HSP 1 Score: 518 bits (1335), Expect = 3.28e-182
Identity = 270/284 (95.07%), Postives = 270/284 (95.07%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
           CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS
Sbjct: 212 CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSN TDEKKGVP ATEETKDD
Sbjct: 332 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNATDEKKGVPNATEETKDD 391

Query: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSN 284
           ASIVTTEEPNDASKA EETEDASK          ATEE KSGSN
Sbjct: 392 ASIVTTEEPNDASKALEETEDASK----------ATEETKSGSN 425

[Close]

BLAST of Csor.00g188110 vs. NCBI nr
Match: XP_023517495.1 (uncharacterized protein LOC111781244 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 504 bits (1297), Expect = 2.20e-176
Identity = 260/277 (93.86%), Postives = 263/277 (94.95%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
           CATFCAN+AEQHDSICPFKIILCEQ CSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS
Sbjct: 212 CATFCANNAEQHDSICPFKIILCEQMCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLLL+LHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLLVLHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKELDSKLGPLV IGTKEDTEE KDDASS+TDEEKDKSNVTDEKKGVP ATEETKDD
Sbjct: 332 TSKIKELDSKLGPLVAIGTKEDTEEVKDDASSETDEEKDKSNVTDEKKGVPNATEETKDD 391

Query: 241 ASI----------VTTEEPNDASKASEETEDASKTTE 267
           ASI          VTTEEPNDASKASEETEDASKTTE
Sbjct: 392 ASIIIQERHAMSSVTTEEPNDASKASEETEDASKTTE 428

[Close]

BLAST of Csor.00g188110 vs. ExPASy TrEMBL
Match: A0A6J1EB13 (uncharacterized protein LOC111432420 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432420 PE=4 SV=1)

HSP 1 Score: 543 bits (1400), Expect = 2.92e-192
Identity = 280/284 (98.59%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
           CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS
Sbjct: 212 CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSN TDEKKGVP ATEETKDD
Sbjct: 332 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNATDEKKGVPNATEETKDD 391

Query: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSN 284
           ASIVTTEEPNDASKA EETEDASKTTEEPNDASKATEE KSGSN
Sbjct: 392 ASIVTTEEPNDASKALEETEDASKTTEEPNDASKATEETKSGSN 435

[Close]

BLAST of Csor.00g188110 vs. ExPASy TrEMBL
Match: A0A6J1EGU3 (uncharacterized protein LOC111432420 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432420 PE=4 SV=1)

HSP 1 Score: 518 bits (1335), Expect = 1.59e-182
Identity = 270/284 (95.07%), Postives = 270/284 (95.07%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
           CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS
Sbjct: 212 CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSN TDEKKGVP ATEETKDD
Sbjct: 332 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNATDEKKGVPNATEETKDD 391

Query: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEERKSGSN 284
           ASIVTTEEPNDASKA EETEDASK          ATEE KSGSN
Sbjct: 392 ASIVTTEEPNDASKALEETEDASK----------ATEETKSGSN 425

[Close]

BLAST of Csor.00g188110 vs. ExPASy TrEMBL
Match: A0A6J1HRU6 (uncharacterized protein LOC111466027 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466027 PE=4 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 4.43e-160
Identity = 230/244 (94.26%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MD+NGFWPLDRREAIAQVLL+NVDFK+EFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDINGFWPLDRREAIAQVLLRNVDFKSEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
            ATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCIT CPMKLVNCPFHNLGCQS
Sbjct: 212 TATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITDCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLL ILHSVHKEANEETLKHR+QQLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLHILHSVHKEANEETLKHRQQQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKE+DSKLGPLVVIGTKEDTEEAKDDASS+TDEEKDKSN  DEKKGVP ATEE K D
Sbjct: 332 TSKIKEMDSKLGPLVVIGTKEDTEEAKDDASSETDEEKDKSNAADEKKGVPNATEEMKAD 391

Query: 241 ASIV 244
           ASIV
Sbjct: 392 ASIV 395

[Close]

BLAST of Csor.00g188110 vs. ExPASy TrEMBL
Match: A0A6J1HMR1 (uncharacterized protein LOC111466027 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466027 PE=4 SV=1)

HSP 1 Score: 459 bits (1181), Expect = 2.54e-159
Identity = 234/253 (92.49%), Postives = 240/253 (94.86%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MD+NGFWPLDRREAIAQVLL+NVDFK+EFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC
Sbjct: 152 MDINGFWPLDRREAIAQVLLRNVDFKSEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 211

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
            ATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCIT CPMKLVNCPFHNLGCQS
Sbjct: 212 TATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITDCPMKLVNCPFHNLGCQS 271

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLISQHCSESFDSHLL ILHSVHKEANEETLKHR+QQLEEASSLDYLRGLQNLRLL
Sbjct: 272 PVPYSLISQHCSESFDSHLLHILHSVHKEANEETLKHRQQQLEEASSLDYLRGLQNLRLL 331

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           TSKIKE+DSKLGPLVVIGTKEDTEEAKDDASS+TDEEKDKSN  DEKKGVP A EETKD 
Sbjct: 332 TSKIKEMDSKLGPLVVIGTKEDTEEAKDDASSETDEEKDKSNAADEKKGVPNAAEETKD- 391

Query: 241 ASIVTTEEPNDAS 253
           ASI T E   DAS
Sbjct: 392 ASISTEEMKADAS 403

[Close]

BLAST of Csor.00g188110 vs. ExPASy TrEMBL
Match: A0A6J1HRN5 (uncharacterized protein LOC111467177 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467177 PE=4 SV=1)

HSP 1 Score: 409 bits (1050), Expect = 7.15e-137
Identity = 214/278 (76.98%), Postives = 239/278 (85.97%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           MDVNGFWPLDRR+AIAQ LLKNVDFK+E+HCD+KFHS EELAEHV  CGFR+L CTNEGC
Sbjct: 151 MDVNGFWPLDRRQAIAQALLKNVDFKSEYHCDKKFHSAEELAEHVEICGFRTLTCTNEGC 210

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
            A FCANH EQHDSICPFKII CEQKCSAFIMRREMDRHCITVCPMKLVNCPFHN+GCQ 
Sbjct: 211 TALFCANHTEQHDSICPFKIIQCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNMGCQF 270

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
           PVPYSLI+QHC+ESFDSHLL ILHS+HKEANEETLKHRRQQLEEASSLD+LRGLQNLRLL
Sbjct: 271 PVPYSLIAQHCTESFDSHLLHILHSIHKEANEETLKHRRQQLEEASSLDHLRGLQNLRLL 330

Query: 181 TSKIKELDSKLGPLVVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATEETKDD 240
           T KIKE++S+LGPLV+I   E+TEEAKD AS++T+E K+ SN T+E K    ATEE KD 
Sbjct: 331 TKKIKEMESELGPLVIISEVEETEEAKD-ASNETEEGKETSNATEEAKDASNATEEKKDV 390

Query: 241 ASIVTTEEPNDASKASEETEDASKTTEEPNDASKATEE 278
           ++   TEE  DAS A+EET+DAS   EE  DAS A +E
Sbjct: 391 SNG--TEETKDASIAAEETKDASIAAEETKDASTAIQE 425

[Close]

BLAST of Csor.00g188110 vs. TAIR 10
Match: AT3G11950.1 (TRAF-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.8e-59
Identity = 134/303 (44.22%), Postives = 185/303 (61.06%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           M+++GFW  D RE IAQ LLKNVDFK+  HC+ KF +  ELAEH +NCG+R++ C NEGC
Sbjct: 141 MEISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMNCGYRTMNCENEGC 200

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
            A FCAN  E HDS+CPFKII CEQ CS  IMRR+MDRHCITVCPMKLVNCPFH++GC S
Sbjct: 201 TAVFCANQMENHDSVCPFKIIPCEQNCSESIMRRDMDRHCITVCPMKLVNCPFHSVGCLS 260

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
            V    + QH  ++  SHL+ IL S++KEA+ + LK R +Q+++ S+   L   +N R L
Sbjct: 261 DVHQCEVQQHHLDNVSSHLMYILRSIYKEASLDDLKPRAEQIQQLST--RLSEARNARSL 320

Query: 181 TSKIKELDSKLGPL-----VVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATE 240
           T+ +KE+D KLGPL     +V  ++ D  E  +  + +  E K+K   ++ K      T 
Sbjct: 321 TNLVKEIDGKLGPLEIKPKIVTDSESDKPENTEKKALEEAEIKEKPETSNLKAVTLEQTA 380

Query: 241 ETKDDASIVTTEEP----NDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSD 295
               +  +V+ E       +A+K   E E A    EE     KA +  + G  +   D++
Sbjct: 381 REAPEDKLVSKEVDAAMVKEAAKKVSEAEIADNVNEE--GELKAQKLLEIGEFIKEGDNN 439

[Close]

BLAST of Csor.00g188110 vs. TAIR 10
Match: AT3G11950.2 (TRAF-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.8e-59
Identity = 134/303 (44.22%), Postives = 185/303 (61.06%), Query Frame = 0


Query: 1   MDVNGFWPLDRREAIAQVLLKNVDFKNEFHCDQKFHSVEELAEHVVNCGFRSLICTNEGC 60
           M+++GFW  D RE IAQ LLKNVDFK+  HC+ KF +  ELAEH +NCG+R++ C NEGC
Sbjct: 141 MEISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMNCGYRTMNCENEGC 200

Query: 61  CATFCANHAEQHDSICPFKIILCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNLGCQS 120
            A FCAN  E HDS+CPFKII CEQ CS  IMRR+MDRHCITVCPMKLVNCPFH++GC S
Sbjct: 201 TAVFCANQMENHDSVCPFKIIPCEQNCSESIMRRDMDRHCITVCPMKLVNCPFHSVGCLS 260

Query: 121 PVPYSLISQHCSESFDSHLLLILHSVHKEANEETLKHRRQQLEEASSLDYLRGLQNLRLL 180
            V    + QH  ++  SHL+ IL S++KEA+ + LK R +Q+++ S+   L   +N R L
Sbjct: 261 DVHQCEVQQHHLDNVSSHLMYILRSIYKEASLDDLKPRAEQIQQLST--RLSEARNARSL 320

Query: 181 TSKIKELDSKLGPL-----VVIGTKEDTEEAKDDASSKTDEEKDKSNVTDEKKGVPTATE 240
           T+ +KE+D KLGPL     +V  ++ D  E  +  + +  E K+K   ++ K      T 
Sbjct: 321 TNLVKEIDGKLGPLEIKPKIVTDSESDKPENTEKKALEEAEIKEKPETSNLKAVTLEQTA 380

Query: 241 ETKDDASIVTTEEP----NDASKASEETEDASKTTEEPNDASKATEERKSGSNVVRNDSD 295
               +  +V+ E       +A+K   E E A    EE     KA +  + G  +   D++
Sbjct: 381 REAPEDKLVSKEVDAAMVKEAAKKVSEAEIADNVNEE--GELKAQKLLEIGEFIKEGDNN 439

The following BLAST results are available for this feature:

BLAST of Csor.00g188110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5DF45	1.0e-08	26.72	TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=...	[more]
Q557K0	1.3e-08	27.32	TNF receptor-associated factor family protein DDB_G0273433/DDB_G0273509 OS=Dicty...	[more]
Q9BUZ4	7.1e-07	29.69	TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN=TRAF4 PE=1 SV=1	[more]
Q54FG0	7.1e-07	28.00	TNF receptor-associated factor family protein DDB_G0290883 OS=Dictyostelium disc...	[more]
P11467	1.6e-06	28.00	RING finger protein DG17 OS=Dictyostelium discoideum OX=44689 GN=zfaA PE=2 SV=2	[more]

BLAST of Csor.00g188110 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595647.1	1.14e-204	100.00	TNF receptor-associated factor 6, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7027608.1	9.39e-201	99.32	hypothetical protein SDJN02_11622 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022925059.1	6.03e-192	98.59	uncharacterized protein LOC111432420 isoform X1 [Cucurbita moschata]	[more]
XP_022925060.1	3.28e-182	95.07	uncharacterized protein LOC111432420 isoform X2 [Cucurbita moschata]	[more]
XP_023517495.1	2.20e-176	93.86	uncharacterized protein LOC111781244 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g188110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EB13	2.92e-192	98.59	uncharacterized protein LOC111432420 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EGU3	1.59e-182	95.07	uncharacterized protein LOC111432420 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HRU6	4.43e-160	94.26	uncharacterized protein LOC111466027 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMR1	2.54e-159	92.49	uncharacterized protein LOC111466027 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HRN5	7.15e-137	76.98	uncharacterized protein LOC111467177 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Csor.00g188110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11950.1	4.8e-59	44.22	TRAF-like superfamily protein	[more]
AT3G11950.2	4.8e-59	44.22	TRAF-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 200..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..295
None	No IPR available	PANTHER	PTHR10131:SF139	NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE	coord: 1..242
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 87..140
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..136 e-value: 5.8E-10 score: 41.4
IPR001293	Zinc finger, TRAF-type	PFAM	PF02176	zf-TRAF	coord: 72..130 e-value: 1.2E-10 score: 41.9
IPR001293	Zinc finger, TRAF-type	PROSITE	PS50145	ZF_TRAF	coord: 72..123 score: 12.339557
IPR043211	TNF receptor-associated factor TRAF	PANTHER	PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	coord: 1..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g188110.m01	Csor.00g188110.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008270	zinc ion binding