Csor.00g177820 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATCGGCTGTGGTCGGAGGACTGCGTGATGGATTGGATGGTTTTGTTTATACTGAAAGAAGCTGCGGCACGCGTGCGTCACGTGGGGATGTCTTTTTGCGTACGTTTTATTATGGCTATGCCGAGACGTTTGCCAAACAGGTCTTTAGAAGCCCAAATTGTGAAATTTGGAAATGGAAAATAATAATAATAATAATTAATAAATAAATATAAAAAGGGAAAAGGCAACCAATGAGTAAATGCCTGTGGTTTATTGTATGCTTGGGATGTAAGAGAACATTGAAAAGCTTATTTTATAATCATAATGTTTTTTTTTTTTTTAATAAAAAAAATCAAAGGAACAATTTTAACGACCCGTGTGAAGCAGCAAGGACCATCTTATCAAGCTGAATACTCCTAGGTGACTGATAGTGAATAGTACGGTAAGAGAAGTGGGTGAAAAGAGCCCCGAGAGTCAAATAGAACATGAAACGAGTAAATAAAAGCTGTTACTGTGTGCATGTTAGGGACTTAGTGGGAGTGGTTTGATTACATAAATTTAAAAAAAAAAATAGTTCAAAATAGTCTTTGAACCGAACAAAAAATAACGTATGCTCATTGTAATGGTCATGCTCGTTTAGGGATGTGTTGCCCATGGCCGCATGTCCATAACAAGCTAAACCCTTTTTAGGGAAGTATGACGTTTCAGAAAAATTATGTCTAGGTCTGCCAGACATGAAATGTCTCAAAGTACTACTATAGGGGATATGACTGGTTGTTAACTTATCCGTAACAATAGTTATATACTGTGAGCCGTTGTTGTTAATTTCTTGCTTGCATATATAACGTCTCTTTTAAAATCTATCTTTGCCTTCGTTTTCTAAAACCTTCTTCTTAAATCGAGATCAGAGGCTCGAGCATACGTCGCTTGCCCGTAGACGTAAGAACGAATTGGCTTAGCTCACTTGTTGTTGGAAAGTGAATGTCACACAATCGCAAGTCCGTTGTTATCAAAAGTACGATTGTGACACTCATTACGTTGCCATAACTTAATATTATTTGTAAAGATATTTAAATACGTTATTTTTCATTAATCGTTAAATCACAATTTTAAAATGTATAAAATAAATAAGAGTATTTAAAAAAAAAAAAACCAATATTAAAAAATATTCTTATAATCATTTTGAGATTAAATTTAAATTAGAAAATTAAATTTGTTAGAGATAGAATTGGAGTAAATTAGAATTTACAAGATTAAAAGATAATTAAGTTTTTTAAACTTTTGCGCGATCAAAACGGCTCAACAATCTCTCTCTTGCGCGCGCGCGCGCTTTCGCCCTCTCTTCACATCGTTCAGATCAATATCTGGAATCGCTTTCTTCCTCTTTCGCTCCTCGTGGCCTTCCTTCATCTCTCTCATCTTCGCATTCTCATTCTGGAAAAGGTCGTTATCGATTTCTCCGATGAAAGATTCGTATTGCTCTCTCTGAGAGTTGCGTTTCTATGTAAAATTTCACTACAGCTCCAGCTACCTCGGTTACTACCGGCGACAGCTACGGCACCGAATGGCAAAGGATTGCAGAGGTTCGATACGGATCCAACTTCGCTGCTCTCACTCTCTTTTTCGCAGGTATACGCTTGGTAGTCCTTTATCTCTGTCGCAATCTCATTCTTGTTCTTGTGTTCTGGTTCTTTTCTCTGTTTTTCTCGAATCGTAATGGCGGATGAATTGCTAGTTTCAATGCGTTGATTTGTAATTATGTTTTTATCGGAAATGGACAGTGAATTTCCAAGTATTCAAAAAGAGAAAAGTAGACTTAAGAAGGATTGGGGAGTTTTCACCGGGACAGCTGGTATAATATTCGTTATATTCGCTCAGGTTTGGCTCTTTGGATGGGATTGCTTACCTTTTCACAGGGACAGCTGGTATAATTATGTGTAATTATGTTTTTATTATTATAGATAAAGCTTACATGTATGATGTATTGGAATTTTGGAGATATTATGACGAATAGTCAAGAAGTTGGTGGATGATATATAGCGAACTATAGAAAGTAAGCTGGACATACAAACAAAAGGTTTCCATGACTTACAATTTGAAATTATCTTGAATCAACGATGAAGATCACAGTATCGGTATTTTTTTTTTAACGTGTCTTTATTGCAGGAGACATGACCTATTAGATCCCACGTCAGTTGGAGAGGGGAACAAAATATTTCTTATAAGGGAAAACTTCTCCCTAATAGAGATTTTTAAAACAGTAAGGCCGACGGCAATACGTAACGGGTCAAATTGAACAATATCTGCTAGCAGTGGACTTGGATTGTTTCATGACCACATTGATAGATAACTATTCAAGGTATGGAAAACGCACGATAACATTCCAAACACATAGCAGTTTGTTGAAATGAGTACAAGATCTGAGTAATTCGAGATTATTATATTTACTATACCAAAATGCTGTTTACCATATATTATGTATACTGCATTCATATAGCCGTTTCTCGTGGCACAATACTGAGGATTTTAATCTAGTTCCATTCTTATGCAAGGAAGGAAGCATATGTGAGTCAAGGACCATTGCAATTCTTATTTGTTTACACTGGTCTTTAATCTGTATTGATTTGCTCATGAATTTATTGTCGATTATTTGGAATTATGTTTCCTAGGCAATGGTCCGTGAATTGCTAAGTTTTCAAGAGAAGAAAGTGGACTCGAGAAGGATTGGGAAGTTCTTAAAGGATTACCAGGTATGAAGTTAATTCTTCTCCACCCTGTATTATAGTAAATTTTATGTTCGATACTTAAATTTATGTACAGTTCTCACGGACTCCACACTTCTGTCGAGAGCACTTATGTTATGTTTAGCCTACAACTTATCTATCAAAATTTTGGTGCTACCTACACTTGCCAAATATGAGATGGTTAGTTGATGAGTATTAGCTGCTACTTTCTGCATGACCCCTTTGCTTGTGTGCTTTTTGAGTGGTTGCTGTTGAAGTGTTGATATAGTCAAATCTACCACAACACGACTCAATAAACCAAAAGCCTAAGTCGAAAGATTGCAGTATATTTAATAATATCAATACTTCAACAGTTAAAAAACTTCGAAATGAGAGCATTTTGATGGACCAATTACACCCTAGTTATGTTGTAGGCTTTGTCATATGAGAAAGAGAATTGTGTCCAATGCAGTTGTCAATAAGTTAAAATAAGTTAAGAGTTTTAGATGTCAAAGTAAAGCATTAAAAGGAAAATGACCATTTTTTTACGTGACAGCATATGTATTATTGAGAATGTTAGTAGATGAAGAACTAAGAGTGAACCTAACCCCCCCTCCCAATGCTCTCCTCTCTCTCCTCTGTTCTCCTACCCCTGACCCTTAGCCTTCATCCAGTTTGCTTCCTCTTCGATTTTGCTTTAGAGTTGAGCATCACCTTCTAGTTTCATCTTTCTCAAGTTGGTTCGTTCTTTTTGGATTTCATAATCACTTTCTTCAAGTGCTTAAGTCTATATATATATATATAGTTACGGAAAAAGGAATGGTACTTTATTACTTTTTTCATCAAGATTCAATGGATTTAGTTTTCATTATTATTATCTTTTGCAATAGTTGGAGCATTCTCTTGCACAGCCTTGGAAAAGTCTTTAGAATGGTAGATTCTCCAAACAGTTGAGAGGGGATAAAGGATTCTTTATAGTTCATAAAATGTCTAACAAGCTTGGTTGGTATTCAGATTTTTGTTTATCCCATGAAGGTGTTAAGAAAAACATTTTGGTTCCAGTTGGGATTCAAAAAAGAGGCTGGATTGTTTTTTGGGAAATGTTAGATGAATTCTAAGAAAAATCTAAAAATCTAGTGAATTTTTGCATGATGATTGAAGATGTATTTAAGGCACTTCTTCACAGCAATGGCTGCGATGGATTTTTCTTTCCCCTCGGCCTTTTCATCTTCGTTGGGAAGCAAGATGGAGGTTTCACTTACGGTTTTTGA ATGGTATCGGCTGTGGTCGGAGGACTGCGTGATGGATTGGATGGTTTTGTTTATACTGAAAGAAGCTGCGGCACGCGTGCGTCACGTGGGGATGTCTTTTTGCGTACGTTTTATTATGGCTATGCCGAGACGTTTGCCAAACAGCTCCAGCTACCTCGGTTACTACCGGCGACAGCTACGGCACCGAATGGCAAAGGATTGCAGAGGTTCGATACGGATCCAACTTCGCTGCTCTCACTCTCTTTTTCGCAGGCAATGGTCCGTGAATTGCTAAGTTTTCAAGAGAAGAAAGTGGACTCGAGAAGGATTGGGAAGTTCTTAAAGGATTACCAGGCACTTCTTCACAGCAATGGCTGCGATGGATTTTTCTTTCCCCTCGGCCTTTTCATCTTCGTTGGGAAGCAAGATGGAGGTTTCACTTACGGTTTTTGA ATGGTATCGGCTGTGGTCGGAGGACTGCGTGATGGATTGGATGGTTTTGTTTATACTGAAAGAAGCTGCGGCACGCGTGCGTCACGTGGGGATGTCTTTTTGCGTACGTTTTATTATGGCTATGCCGAGACGTTTGCCAAACAGCTCCAGCTACCTCGGTTACTACCGGCGACAGCTACGGCACCGAATGGCAAAGGATTGCAGAGGTTCGATACGGATCCAACTTCGCTGCTCTCACTCTCTTTTTCGCAGGCAATGGTCCGTGAATTGCTAAGTTTTCAAGAGAAGAAAGTGGACTCGAGAAGGATTGGGAAGTTCTTAAAGGATTACCAGGCACTTCTTCACAGCAATGGCTGCGATGGATTTTTCTTTCCCCTCGGCCTTTTCATCTTCGTTGGGAAGCAAGATGGAGGTTTCACTTACGGTTTTTGA MVSAVVGGLRDGLDGFVYTERSCGTRASRGDVFLRTFYYGYAETFAKQLQLPRLLPATATAPNGKGLQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCDGFFFPLGLFIFVGKQDGGFTYGF Homology
BLAST of Csor.00g177820 vs. NCBI nr
Match: KAG6591685.1 (hypothetical protein SDJN03_14031, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 287 bits (734), Expect = 1.17e-97 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A6P5T129 (vacuolar protein sorting-associated protein 45 homolog OS=Prunus avium OX=42229 GN=LOC110761741 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.04e-04 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A4Y1RYE9 (Vacuolar protein sorting 45 OS=Prunus dulcis OX=3755 GN=Prudu_021098 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.14e-04 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A251MRG9 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G019800 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.20e-04 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A314YHU1 (Vacuolar protein sorting-associated protein 45 homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_05368 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.29e-04 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A314ZRK0 (Vacuolar protein sorting-associated protein 45 homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_19907 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.29e-04 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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