Csor.00g177820 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g177820
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr09: 2780894 .. 2784870 (-)
RNA-Seq ExpressionCsor.00g177820
SyntenyCsor.00g177820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCGGCTGTGGTCGGAGGACTGCGTGATGGATTGGATGGTTTTGTTTATACTGAAAGAAGCTGCGGCACGCGTGCGTCACGTGGGGATGTCTTTTTGCGTACGTTTTATTATGGCTATGCCGAGACGTTTGCCAAACAGGTCTTTAGAAGCCCAAATTGTGAAATTTGGAAATGGAAAATAATAATAATAATAATTAATAAATAAATATAAAAAGGGAAAAGGCAACCAATGAGTAAATGCCTGTGGTTTATTGTATGCTTGGGATGTAAGAGAACATTGAAAAGCTTATTTTATAATCATAATGTTTTTTTTTTTTTTAATAAAAAAAATCAAAGGAACAATTTTAACGACCCGTGTGAAGCAGCAAGGACCATCTTATCAAGCTGAATACTCCTAGGTGACTGATAGTGAATAGTACGGTAAGAGAAGTGGGTGAAAAGAGCCCCGAGAGTCAAATAGAACATGAAACGAGTAAATAAAAGCTGTTACTGTGTGCATGTTAGGGACTTAGTGGGAGTGGTTTGATTACATAAATTTAAAAAAAAAAATAGTTCAAAATAGTCTTTGAACCGAACAAAAAATAACGTATGCTCATTGTAATGGTCATGCTCGTTTAGGGATGTGTTGCCCATGGCCGCATGTCCATAACAAGCTAAACCCTTTTTAGGGAAGTATGACGTTTCAGAAAAATTATGTCTAGGTCTGCCAGACATGAAATGTCTCAAAGTACTACTATAGGGGATATGACTGGTTGTTAACTTATCCGTAACAATAGTTATATACTGTGAGCCGTTGTTGTTAATTTCTTGCTTGCATATATAACGTCTCTTTTAAAATCTATCTTTGCCTTCGTTTTCTAAAACCTTCTTCTTAAATCGAGATCAGAGGCTCGAGCATACGTCGCTTGCCCGTAGACGTAAGAACGAATTGGCTTAGCTCACTTGTTGTTGGAAAGTGAATGTCACACAATCGCAAGTCCGTTGTTATCAAAAGTACGATTGTGACACTCATTACGTTGCCATAACTTAATATTATTTGTAAAGATATTTAAATACGTTATTTTTCATTAATCGTTAAATCACAATTTTAAAATGTATAAAATAAATAAGAGTATTTAAAAAAAAAAAAACCAATATTAAAAAATATTCTTATAATCATTTTGAGATTAAATTTAAATTAGAAAATTAAATTTGTTAGAGATAGAATTGGAGTAAATTAGAATTTACAAGATTAAAAGATAATTAAGTTTTTTAAACTTTTGCGCGATCAAAACGGCTCAACAATCTCTCTCTTGCGCGCGCGCGCGCTTTCGCCCTCTCTTCACATCGTTCAGATCAATATCTGGAATCGCTTTCTTCCTCTTTCGCTCCTCGTGGCCTTCCTTCATCTCTCTCATCTTCGCATTCTCATTCTGGAAAAGGTCGTTATCGATTTCTCCGATGAAAGATTCGTATTGCTCTCTCTGAGAGTTGCGTTTCTATGTAAAATTTCACTACAGCTCCAGCTACCTCGGTTACTACCGGCGACAGCTACGGCACCGAATGGCAAAGGATTGCAGAGGTTCGATACGGATCCAACTTCGCTGCTCTCACTCTCTTTTTCGCAGGTATACGCTTGGTAGTCCTTTATCTCTGTCGCAATCTCATTCTTGTTCTTGTGTTCTGGTTCTTTTCTCTGTTTTTCTCGAATCGTAATGGCGGATGAATTGCTAGTTTCAATGCGTTGATTTGTAATTATGTTTTTATCGGAAATGGACAGTGAATTTCCAAGTATTCAAAAAGAGAAAAGTAGACTTAAGAAGGATTGGGGAGTTTTCACCGGGACAGCTGGTATAATATTCGTTATATTCGCTCAGGTTTGGCTCTTTGGATGGGATTGCTTACCTTTTCACAGGGACAGCTGGTATAATTATGTGTAATTATGTTTTTATTATTATAGATAAAGCTTACATGTATGATGTATTGGAATTTTGGAGATATTATGACGAATAGTCAAGAAGTTGGTGGATGATATATAGCGAACTATAGAAAGTAAGCTGGACATACAAACAAAAGGTTTCCATGACTTACAATTTGAAATTATCTTGAATCAACGATGAAGATCACAGTATCGGTATTTTTTTTTTAACGTGTCTTTATTGCAGGAGACATGACCTATTAGATCCCACGTCAGTTGGAGAGGGGAACAAAATATTTCTTATAAGGGAAAACTTCTCCCTAATAGAGATTTTTAAAACAGTAAGGCCGACGGCAATACGTAACGGGTCAAATTGAACAATATCTGCTAGCAGTGGACTTGGATTGTTTCATGACCACATTGATAGATAACTATTCAAGGTATGGAAAACGCACGATAACATTCCAAACACATAGCAGTTTGTTGAAATGAGTACAAGATCTGAGTAATTCGAGATTATTATATTTACTATACCAAAATGCTGTTTACCATATATTATGTATACTGCATTCATATAGCCGTTTCTCGTGGCACAATACTGAGGATTTTAATCTAGTTCCATTCTTATGCAAGGAAGGAAGCATATGTGAGTCAAGGACCATTGCAATTCTTATTTGTTTACACTGGTCTTTAATCTGTATTGATTTGCTCATGAATTTATTGTCGATTATTTGGAATTATGTTTCCTAGGCAATGGTCCGTGAATTGCTAAGTTTTCAAGAGAAGAAAGTGGACTCGAGAAGGATTGGGAAGTTCTTAAAGGATTACCAGGTATGAAGTTAATTCTTCTCCACCCTGTATTATAGTAAATTTTATGTTCGATACTTAAATTTATGTACAGTTCTCACGGACTCCACACTTCTGTCGAGAGCACTTATGTTATGTTTAGCCTACAACTTATCTATCAAAATTTTGGTGCTACCTACACTTGCCAAATATGAGATGGTTAGTTGATGAGTATTAGCTGCTACTTTCTGCATGACCCCTTTGCTTGTGTGCTTTTTGAGTGGTTGCTGTTGAAGTGTTGATATAGTCAAATCTACCACAACACGACTCAATAAACCAAAAGCCTAAGTCGAAAGATTGCAGTATATTTAATAATATCAATACTTCAACAGTTAAAAAACTTCGAAATGAGAGCATTTTGATGGACCAATTACACCCTAGTTATGTTGTAGGCTTTGTCATATGAGAAAGAGAATTGTGTCCAATGCAGTTGTCAATAAGTTAAAATAAGTTAAGAGTTTTAGATGTCAAAGTAAAGCATTAAAAGGAAAATGACCATTTTTTTACGTGACAGCATATGTATTATTGAGAATGTTAGTAGATGAAGAACTAAGAGTGAACCTAACCCCCCCTCCCAATGCTCTCCTCTCTCTCCTCTGTTCTCCTACCCCTGACCCTTAGCCTTCATCCAGTTTGCTTCCTCTTCGATTTTGCTTTAGAGTTGAGCATCACCTTCTAGTTTCATCTTTCTCAAGTTGGTTCGTTCTTTTTGGATTTCATAATCACTTTCTTCAAGTGCTTAAGTCTATATATATATATATAGTTACGGAAAAAGGAATGGTACTTTATTACTTTTTTCATCAAGATTCAATGGATTTAGTTTTCATTATTATTATCTTTTGCAATAGTTGGAGCATTCTCTTGCACAGCCTTGGAAAAGTCTTTAGAATGGTAGATTCTCCAAACAGTTGAGAGGGGATAAAGGATTCTTTATAGTTCATAAAATGTCTAACAAGCTTGGTTGGTATTCAGATTTTTGTTTATCCCATGAAGGTGTTAAGAAAAACATTTTGGTTCCAGTTGGGATTCAAAAAAGAGGCTGGATTGTTTTTTGGGAAATGTTAGATGAATTCTAAGAAAAATCTAAAAATCTAGTGAATTTTTGCATGATGATTGAAGATGTATTTAAGGCACTTCTTCACAGCAATGGCTGCGATGGATTTTTCTTTCCCCTCGGCCTTTTCATCTTCGTTGGGAAGCAAGATGGAGGTTTCACTTACGGTTTTTGA

mRNA sequence

ATGGTATCGGCTGTGGTCGGAGGACTGCGTGATGGATTGGATGGTTTTGTTTATACTGAAAGAAGCTGCGGCACGCGTGCGTCACGTGGGGATGTCTTTTTGCGTACGTTTTATTATGGCTATGCCGAGACGTTTGCCAAACAGCTCCAGCTACCTCGGTTACTACCGGCGACAGCTACGGCACCGAATGGCAAAGGATTGCAGAGGTTCGATACGGATCCAACTTCGCTGCTCTCACTCTCTTTTTCGCAGGCAATGGTCCGTGAATTGCTAAGTTTTCAAGAGAAGAAAGTGGACTCGAGAAGGATTGGGAAGTTCTTAAAGGATTACCAGGCACTTCTTCACAGCAATGGCTGCGATGGATTTTTCTTTCCCCTCGGCCTTTTCATCTTCGTTGGGAAGCAAGATGGAGGTTTCACTTACGGTTTTTGA

Coding sequence (CDS)

ATGGTATCGGCTGTGGTCGGAGGACTGCGTGATGGATTGGATGGTTTTGTTTATACTGAAAGAAGCTGCGGCACGCGTGCGTCACGTGGGGATGTCTTTTTGCGTACGTTTTATTATGGCTATGCCGAGACGTTTGCCAAACAGCTCCAGCTACCTCGGTTACTACCGGCGACAGCTACGGCACCGAATGGCAAAGGATTGCAGAGGTTCGATACGGATCCAACTTCGCTGCTCTCACTCTCTTTTTCGCAGGCAATGGTCCGTGAATTGCTAAGTTTTCAAGAGAAGAAAGTGGACTCGAGAAGGATTGGGAAGTTCTTAAAGGATTACCAGGCACTTCTTCACAGCAATGGCTGCGATGGATTTTTCTTTCCCCTCGGCCTTTTCATCTTCGTTGGGAAGCAAGATGGAGGTTTCACTTACGGTTTTTGA

Protein sequence

MVSAVVGGLRDGLDGFVYTERSCGTRASRGDVFLRTFYYGYAETFAKQLQLPRLLPATATAPNGKGLQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCDGFFFPLGLFIFVGKQDGGFTYGF
Homology
[Close]
BLAST of Csor.00g177820 vs. NCBI nr
Match: KAG6591685.1 (hypothetical protein SDJN03_14031, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287 bits (734), Expect = 1.17e-97
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MVSAVVGGLRDGLDGFVYTERSCGTRASRGDVFLRTFYYGYAETFAKQLQLPRLLPATAT 60
           MVSAVVGGLRDGLDGFVYTERSCGTRASRGDVFLRTFYYGYAETFAKQLQLPRLLPATAT
Sbjct: 1   MVSAVVGGLRDGLDGFVYTERSCGTRASRGDVFLRTFYYGYAETFAKQLQLPRLLPATAT 60

Query: 61  APNGKGLQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCD 120
           APNGKGLQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCD
Sbjct: 61  APNGKGLQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCD 120

Query: 121 GFFFPLGLFIFVGKQDGGFTYGF 143
           GFFFPLGLFIFVGKQDGGFTYGF
Sbjct: 121 GFFFPLGLFIFVGKQDGGFTYGF 143

[Close]
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A6P5T129 (vacuolar protein sorting-associated protein 45 homolog OS=Prunus avium OX=42229 GN=LOC110761741 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.04e-04
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0 

Query: 67  LQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCDGFF 123
           + R D   T LL+    QAMV EL+  Q+ KVD R IGKF KD Q ++ S+  DGFF
Sbjct: 98  IDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTIGKFPKDQQEVVLSSEQDGFF 154

[Close]
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A4Y1RYE9 (Vacuolar protein sorting 45 OS=Prunus dulcis OX=3755 GN=Prudu_021098 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.14e-04
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0 

Query: 67  LQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCDGFF 123
           + R D   T LL+    QAMV EL+  Q+ KVD R IGKF KD Q ++ S+  DGFF
Sbjct: 193 IDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTIGKFPKDQQEVVLSSEQDGFF 249

[Close]
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A251MRG9 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G019800 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.20e-04
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0 

Query: 67  LQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCDGFF 123
           + R D   T LL+    QAMV EL+  Q+ KVD R IGKF KD Q ++ S+  DGFF
Sbjct: 225 IDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTIGKFPKDQQEVVLSSEQDGFF 281

[Close]
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A314YHU1 (Vacuolar protein sorting-associated protein 45 homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_05368 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.29e-04
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0 

Query: 67  LQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCDGFF 123
           + R D   T LL+    QAMV EL+  Q+ KVD R IGKF KD Q ++ S+  DGFF
Sbjct: 225 IDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTIGKFPKDQQEVVLSSEQDGFF 281

[Close]
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match: A0A314ZRK0 (Vacuolar protein sorting-associated protein 45 homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_19907 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.29e-04
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0 

Query: 67  LQRFDTDPTSLLSLSFSQAMVRELLSFQEKKVDSRRIGKFLKDYQALLHSNGCDGFF 123
           + R D   T LL+    QAMV EL+  Q+ KVD R IGKF KD Q ++ S+  DGFF
Sbjct: 225 IDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLRTIGKFPKDQQEVVLSSEQDGFF 281

The following BLAST results are available for this feature:
BLAST of Csor.00g177820 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g177820 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6591685.11.17e-97100.00hypothetical protein SDJN03_14031, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6P5T1295.04e-0449.12vacuolar protein sorting-associated protein 45 homolog OS=Prunus avium OX=42229 ... [more]
A0A4Y1RYE95.14e-0449.12Vacuolar protein sorting 45 OS=Prunus dulcis OX=3755 GN=Prudu_021098 PE=3 SV=1[more]
A0A251MRG95.20e-0449.12Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G019800 PE=3 SV=1[more]
A0A314YHU15.29e-0449.12Vacuolar protein sorting-associated protein 45 homolog OS=Prunus yedoensis var. ... [more]
A0A314ZRK05.29e-0449.12Vacuolar protein sorting-associated protein 45 homolog OS=Prunus yedoensis var. ... [more]
BLAST of Csor.00g177820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g177820.m01Csor.00g177820.m01mRNA