Csor.00g177750 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGATTTAATCGTGCACGTGCTGCACAACTCACTCTCCCCCACTTTACCTGCCAAACACCCCTGTTTATGCCAGTGGGAACACAAGGTATAATTTCCAATGGCAATCCAATTTCTCATATGCATTCCTTGCGGAAAACATATAACTTATAATCTCTACCATTTGTCCAATTGCACGCAGCTGTGTTTGAAATTAAGTTTATCTGGTTACAGGGACAATTAAAGGGTTGACAACTCAGCAGCTTGAAGAGATTGGTTGTCAAATTATACTTGGAAATACATATCATTTAGCACTTCGTCCTACTTCCGAGCTTATTGATGAACTGGGAGGTCTCCATAAGTTTATGAACTGGCCCAGAGCAATGCTTACTGATTCTGGCGGGTTTCAAATGGTTGTTTATCTATGTTCGATTCATTTTTACCATTTTTATTTGTATATTTTCTTACATTTACAACTCCTTTTCATTCTTGCTTCCTTATGGAAGTTTGGAAGGATTTTTCCATTTTTCTCAAGGAAATGTTGATTTTTCATAAATAAAATTAAAAAAAAAAAAAAAAAAAAGAAGGAAAGGAAAAAAGAAAAAAAAGCTTGGAAGGATCGAAAAATTTTGTCCTTTCAAACTTAATTCACCTAATATGTTACTTGGACATTATTGTATTAGTATAATCACTGATATTACGTGCTGATGAATCCTTAACTTATATTACACCAGGCGAGGGCAATTAGATAAAATTATTAATAGGATAGGACATTGGGTCGATAGTTTATTGTAGATGAATATTATCTGCACAGGAAAAACTCACGGTCTAATAGTCTTAAGTCTTTAGATATGTATTTGTTAACATGATAGTTGAGTTAAGGAGGCAACTTGCTGCCAGAGACAATGTTTCCTTGAGATGCTCGACACTTGACCTCAGAGTTTGTCGCTGATGTTGAAATAATTCAACCAAAGGAGTTGGCTGTCTCAAAACCATTGCTCTAACTGAAATAAGGAACTTTTAAGCTCTTTAAGTACAGGATCTGGTATGGGATTAGTATGGCTAGATTCATCAGAATATGCATTTATAAAATACCAACCCAAATTCCATTTACTCTACTATTCTTTTTAAATTTCCTACTGTCGTTATAATTTCTTTATACCATTTTTATTAGCTTTCTTGATAGTATTTTCTTAACGAAGGTTATATTCTATTCAATGTTCACTAGGTTTCATTGTTGCATTTAGCTGATATCACCGAAAAAGGTGTAACATTTCAGGTACTTCTCTCAATGTTTTATTATCATTATTGTTATTATTTTCTGAGCAAGAAATAAACATTCTCAGTGTTAACTTCAAGTTGTTAATGTTATTTATGCATAGGACAGCTTTTAGCTGACAATTGTATTTAGCATTATCTTTTGGCTAATAATTTTGTTGATTTATTGAAGAGTGCTCTAATTCTCTAATCCTTTTAGAAAGAGAAAAAAAACTAATGCAAGTTTTCTTTCTTCAGTCTCCAGTTGATGGGAAGCCAATGCTTTTGACTCCTGAGGAATCAATTCAAATTCAAGTAGGTTAAGATATGGTTGTTTGATACTTGGTGACGTTATTCGTATACTTTTGGTTTCTTATAAAAACAAATGTAGTCTTATTCTTTTTACTTAAGTAACCTAAAAAAGGGTATTTCATAGTAATGGACAGTCATTTGCCCCATGGTTGACAACACGTCCACTCCATTAGATACTGCTTGCTCAAATGAAAATAACTAAATCAAATATGGTTGACAACACGTCCACTCCATTAGTGCTCATCTCTTTCTCTCCTGGCTCTTGAATTTTTAGAATGTTAAGATGTTATTACTATGAAGATCTTTATTTTTCTTGACGAGGCACATAAATTTTATGTGCATGACATTCACTTGTGTACAGTTGAATATTGCTCGCACCACATCAAGACCTGGCATGAATTTTTCATAAGCTAGAATGCTCTAAATGCACTATTCTATTTTTCCTTGTGTGACTTCATTTTTATTTCCCTCAATTTTGCACAGAACAGAATTGGAGCAGATATTATTATGGCTCTTGATGATGTAGTAAGAACAACCATTACAGGTCCAAGAATTGAGGAGGCCATGTACCGTACTCTTCGGTGGATAGACAGATGTATAGCAGGTAAAATTTTCCAGTACTTGCATATATACAGAAAGTGCATTAAAAAAAAAAGGTTGAAGCACTTGCCTGAACATGGACTATAAATATTTATAACTTTTTCAAGCGCTTATATAAATTGTAAGCACAAATATTTCTCTGTGTTGAGTGTTGATTTACTTGACTTGTAGAGTTAACCTACTTTTATATTCTATATGAATGTAATTTGTTAGTTTTTTTATTTTAATGTAGCATTATTCGCGCACATGTTCAAACGTTGCCTTTTCCCTGTCCTTAGATCATCCATTTTTATAATTTGAGACATTATTTATTTGTTCATCTGCAACCTTTTATGCTACACAATTTATGGATGTTCCACAAATATATTTGACCAATCATATGAATGGTGTCTTAGTATGTCATTTAAATTCCTTCTACTTCAATAATTAAGAATTGTTTTGCTGAGATACTTTTTATATTCAGCACATAAGAGACCTCATGAGCAGAATTTATTTGGCATTGTGCAAGGTGGATTGGATCCAGTCCTAAGGTATAACTAAATTTAACTTTCTCAGTTAATTGTTCCTCATCGAGTTGTATGATCTTGTCCTTCCCTCCAGTTCCAGAACTTTCGCTTGCATGATCTGATTGTTTATTCTGATGGCAGGGACATATGCGTCAGAGGCTTGGTTGACCGAAATTTACCAGGGCAAGTTTACACTACTTTAATTGGATGATTTATTTAATCCTATTTTGGACATTGTTGGATGCATAAAATGCAGTAGCTTATGGGAGGTGTTTATGAACTGTGGGTTTCTAACTTTTTTGATTTCTTTTAGTAGGGAAGAAAAACTTTCTTTGAAGATAACAAAACGCAAAGGAATAAGTGGAGGAGGCATCTCAAAGGAGAACAAAAACAATACAGCAAAATAACCTCATACGTTAAACAAATAGAAACTTCCTAGGGTTACGATCCGTTAGATTCCCTTTTCAAGCAACCTACTTTTATTTTCTTCATCTGCCCCAATCCTAGAGAACACAACATTCTGAAATCTGACTTCAGCATTGCTGTCCTACTTAATTTTGTTTTGAAATAGAGCTTTCAAAACATGTTCTTTCCTTCAGTTTGAACTCAAAACAACAACAAGCAAAGAGACTGAACTAATAGAGAATGACTTATCTTCTGAATTACAACTACTAGAATCCATCTAATGTCTCCATTTTCACCAGATAGATAGAGCAAGAGAGAGAATGCACCACCCATCTTCCCAGAGTCGAAAAATCCCTTGTTATTGCAATTTGATACAATAGTTAGCCTATGGGAATTTGATTCTCCTTTCATTTTGCTTCGCTTATTTACTTTCTGAGGAAACCTTTACCGTTTCATTATCTGCAAACAAAAGTGTCTGTATGGTGTTGTGTGCTTCAATAGTTGAGTTTCTGAAACTGCCCGTTTCATTCAACAGGTATGCAATTGGCGGTCTGGCAGGTGGTGAAGATAAAGATTCATTTTGGCGTGTTGTTGCTCAATGTACTGCTTCACTGCCCGAGGACAAGCCTAGATATGTTATGGTAATAATTTTTATAATTCTATAATTCTTCATGCTATCATTTTTTTTCTTCTTTCTATTGTTGATTTTTATAATCTTGTCAGGGTGTCGGTTATCCATTGGACATTGTAGTATGTAGTGCGTTAGGTGCCGACATGTATGACTGTGTTTATCCAACCCGTACTGCTCGTTTTGGCACAGCGCTCATACCTGAGGTGAAAACATTCTGAGCTTTTGGATCAATTTGTATGTGCATTTGCATTTTTGCTACAAAGTCATTGTAACCAGATACAAAAAATGTATGTGTGTGTGTGTGTATTAATTAAAAAATAAGTGATTGGAACTAGATCTCATGTATTTGTACCAAAATCAATGATTTACTTGAGAGAAATCTGTCTATTGGCATGACACATACCATAACCATTATAAAAAAACGGTTCAGCAATGAATTTTTCTTGGTGCGATGCTTACTAGTATCTCCTTCAATGATTGTGTGTATTACGCAATTATCCTTGTCTTCAACACTATTTATTTGTTGACTTGTGAGGTGCTGGGACTGAGGAAATGAGGGATAATCTTTTTATACTCTTTCAGTTACAGTCTTGCTTAATTAGTCACCCCTTGGAGCTTAATCCGTTTGTGGTATTCACCGCAGGGAGTTTTAAAACTAAAACACCAAGTGATGGCTGATGATACCCGTCCCATTGATCCTACATGCGATTGCATGGTATACTTCGACAGTTTTGGCTTCTTAGTAATTAGTTCTTTGCATTTTAAGGAGACACATTATGCATCTGCTTCATCATTTACTACCTTAGGTCTGCAGGAACTATACTAGGGCCTACATTCATTGTCTTGTTACAAAATATGCTATGGGTTCTCAGCTACTCTCATATCACAATTTATATTACATGATGAAGGTATGGGACATTATCTTGCCTAAAATACATTTCCCATCTTGTTTCTTTTATTGAACTAACTGTGGGAAGTGTTAAAAATTCACAGCTTAGCAGAGATCTACATTCTTCAATTGTTCAGGGGCAATTCCCAGAGTAAGTTTTCCATTTTGTACCATCCAAGGGCTAAGTGTAATTTACCCTCCTATTTATGTTTCCAAGTTTGTAAAATTCAATGCCCAGTTATTATTTATATCTTCACGCATCCACTCATTTTTGCTAGAAAATCTAAAATGATACAAAGAGAGATTTTATTTCAAGGATCATACCTGTGAAAGTGATTCTATTATTGAATTTTTCCTTTTCCATATTATTTTTTAAAAAATAAACAACAAAAATATCCATCTTAATTTTCTTCAAAAAGAAGGAAAAACCACTTCACGAAGATTTTAAAATAAGCCACATAAAAGTTTTATTATACAGGACATGGTTTGTAATTGCTTCTAATAATAGCCTGCTCAAACTTTTGCAGGTTCGTTCGCAAGTTCTTGCAGAGAATGGTACTGGTTCTTGGAAATAGTCCTCCGTTTCTCTCTTTCTGTCTCTCGCACACACACACCCGAATCTTATCCAAGTGCTTAGCTCATGACTTGCTTCAGTATCTTGAATATTTTAATGATATGACATCAGAGATTTTTGTGACTCGAAAAAGAAAAGGAGAGATAAAAAACAATAGCCGTTCCAATTGACTGAATTCTGTGTCTTTTCGGTTCAATTTGTTGCACATTATAGCCGTTATCTTGTCTAATTTATAGCTTCTTTGCTGTTTTATAGTTTCCTCAGGGTGACGTGCCGCAATGGGTCTGCAATGCTATGGAGGTTGCCGGTATCGACATCTCTTCCTGTTGTGCTCCTTTCACTACAAGAAATACTGTTTTTAGTGACGAAATTTCGTCGCTAAAGCCACAGAATAGTTGCAAAAATCCTTCAGCGACATAA ATGGGAAGATTTAATCGTGCACGTGCTGCACAACTCACTCTCCCCCACTTTACCTGCCAAACACCCCTGTTTATGCCAGTGGGAACACAAGGGACAATTAAAGGGTTGACAACTCAGCAGCTTGAAGAGATTGGTTGTCAAATTATACTTGGAAATACATATCATTTAGCACTTCGTCCTACTTCCGAGCTTATTGATGAACTGGGAGGTCTCCATAAGTTTATGAACTGGCCCAGAGCAATGCTTACTGATTCTGGCGGGTTTCAAATGGTTTCATTGTTGCATTTAGCTGATATCACCGAAAAAGGTGTAACATTTCAGTCTCCAGTTGATGGGAAGCCAATGCTTTTGACTCCTGAGGAATCAATTCAAATTCAAAACAGAATTGGAGCAGATATTATTATGGCTCTTGATGATGTAGTAAGAACAACCATTACAGGTCCAAGAATTGAGGAGGCCATGTACCGTACTCTTCGGTGGATAGACAGATGTATAGCAGCACATAAGAGACCTCATGAGCAGAATTTATTTGGCATTGTGCAAGGTGGATTGGATCCAGTCCTAAGGGACATATGCGTCAGAGGCTTGGTTGACCGAAATTTACCAGGGTATGCAATTGGCGGTCTGGCAGGTGGTGAAGATAAAGATTCATTTTGGCGTGTTGTTGCTCAATGTACTGCTTCACTGCCCGAGGACAAGCCTAGATATGTTATGGGTGTCGGTTATCCATTGGACATTGTAGTATGTAGTGCGTTAGGTGCCGACATGTATGACTGTGTTTATCCAACCCGTACTGCTCGTTTTGGCACAGCGCTCATACCTGAGGGAGTTTTAAAACTAAAACACCAAGTGATGGCTGATGATACCCGTCCCATTGATCCTACATGCGATTGCATGGTCTGCAGGAACTATACTAGGGCCTACATTCATTGTCTTGTTACAAAATATGCTATGGGTTCTCAGCTACTCTCATATCACAATTTATATTACATGATGAAGTTTCCTCAGGGTGACGTGCCGCAATGGGTCTGCAATGCTATGGAGGTTGCCGGTATCGACATCTCTTCCTGTTGTGCTCCTTTCACTACAAGAAATACTGTTTTTAGTGACGAAATTTCGTCGCTAAAGCCACAGAATAGTTGCAAAAATCCTTCAGCGACATAA ATGGGAAGATTTAATCGTGCACGTGCTGCACAACTCACTCTCCCCCACTTTACCTGCCAAACACCCCTGTTTATGCCAGTGGGAACACAAGGGACAATTAAAGGGTTGACAACTCAGCAGCTTGAAGAGATTGGTTGTCAAATTATACTTGGAAATACATATCATTTAGCACTTCGTCCTACTTCCGAGCTTATTGATGAACTGGGAGGTCTCCATAAGTTTATGAACTGGCCCAGAGCAATGCTTACTGATTCTGGCGGGTTTCAAATGGTTTCATTGTTGCATTTAGCTGATATCACCGAAAAAGGTGTAACATTTCAGTCTCCAGTTGATGGGAAGCCAATGCTTTTGACTCCTGAGGAATCAATTCAAATTCAAAACAGAATTGGAGCAGATATTATTATGGCTCTTGATGATGTAGTAAGAACAACCATTACAGGTCCAAGAATTGAGGAGGCCATGTACCGTACTCTTCGGTGGATAGACAGATGTATAGCAGCACATAAGAGACCTCATGAGCAGAATTTATTTGGCATTGTGCAAGGTGGATTGGATCCAGTCCTAAGGGACATATGCGTCAGAGGCTTGGTTGACCGAAATTTACCAGGGTATGCAATTGGCGGTCTGGCAGGTGGTGAAGATAAAGATTCATTTTGGCGTGTTGTTGCTCAATGTACTGCTTCACTGCCCGAGGACAAGCCTAGATATGTTATGGGTGTCGGTTATCCATTGGACATTGTAGTATGTAGTGCGTTAGGTGCCGACATGTATGACTGTGTTTATCCAACCCGTACTGCTCGTTTTGGCACAGCGCTCATACCTGAGGGAGTTTTAAAACTAAAACACCAAGTGATGGCTGATGATACCCGTCCCATTGATCCTACATGCGATTGCATGGTCTGCAGGAACTATACTAGGGCCTACATTCATTGTCTTGTTACAAAATATGCTATGGGTTCTCAGCTACTCTCATATCACAATTTATATTACATGATGAAGTTTCCTCAGGGTGACGTGCCGCAATGGGTCTGCAATGCTATGGAGGTTGCCGGTATCGACATCTCTTCCTGTTGTGCTCCTTTCACTACAAGAAATACTGTTTTTAGTGACGAAATTTCGTCGCTAAAGCCACAGAATAGTTGCAAAAATCCTTCAGCGACATAA MGRFNRARAAQLTLPHFTCQTPLFMPVGTQGTIKGLTTQQLEEIGCQIILGNTYHLALRPTSELIDELGGLHKFMNWPRAMLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVRTTITGPRIEEAMYRTLRWIDRCIAAHKRPHEQNLFGIVQGGLDPVLRDICVRGLVDRNLPGYAIGGLAGGEDKDSFWRVVAQCTASLPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHQVMADDTRPIDPTCDCMVCRNYTRAYIHCLVTKYAMGSQLLSYHNLYYMMKFPQGDVPQWVCNAMEVAGIDISSCCAPFTTRNTVFSDEISSLKPQNSCKNPSAT Homology
BLAST of Csor.00g177750 vs. ExPASy Swiss-Prot
Match: Q9BXR0 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Homo sapiens OX=9606 GN=QTRT1 PE=1 SV=3) HSP 1 Score: 439.1 bits (1128), Expect = 5.1e-122 Identity = 198/330 (60.00%), Postives = 258/330 (78.18%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy Swiss-Prot
Match: Q28HC6 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Xenopus tropicalis OX=8364 GN=qtrt1 PE=2 SV=2) HSP 1 Score: 438.3 bits (1126), Expect = 8.8e-122 Identity = 204/375 (54.40%), Postives = 266/375 (70.93%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy Swiss-Prot
Match: Q7SYK1 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Danio rerio OX=7955 GN=qtrt1 PE=2 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 2.0e-121 Identity = 194/328 (59.15%), Postives = 253/328 (77.13%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy Swiss-Prot
Match: Q9VPY8 (Queuine tRNA-ribosyltransferase catalytic subunit OS=Drosophila melanogaster OX=7227 GN=Tgt PE=2 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 9.7e-121 Identity = 204/351 (58.12%), Postives = 252/351 (71.79%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy Swiss-Prot
Match: Q4QR99 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Rattus norvegicus OX=10116 GN=Qtrt1 PE=1 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 2.8e-120 Identity = 195/330 (59.09%), Postives = 258/330 (78.18%), Query Frame = 0
BLAST of Csor.00g177750 vs. NCBI nr
Match: KAG6591678.1 (Queuine tRNA-ribosyltransferase catalytic subunit 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 803 bits (2075), Expect = 6.21e-294 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0
BLAST of Csor.00g177750 vs. NCBI nr
Match: XP_022936381.1 (queuine tRNA-ribosyltransferase catalytic subunit 1-like [Cucurbita moschata] >XP_022976628.1 queuine tRNA-ribosyltransferase catalytic subunit 1-like [Cucurbita maxima] >KAG7024558.1 Queuine tRNA-ribosyltransferase catalytic subunit 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 790 bits (2039), Expect = 6.43e-288 Identity = 387/412 (93.93%), Postives = 387/412 (93.93%), Query Frame = 0
BLAST of Csor.00g177750 vs. NCBI nr
Match: XP_023535270.1 (queuine tRNA-ribosyltransferase catalytic subunit 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 785 bits (2028), Expect = 3.05e-286 Identity = 384/412 (93.20%), Postives = 386/412 (93.69%), Query Frame = 0
BLAST of Csor.00g177750 vs. NCBI nr
Match: XP_021677696.1 (queuine tRNA-ribosyltransferase catalytic subunit 1-like isoform X4 [Hevea brasiliensis]) HSP 1 Score: 727 bits (1876), Expect = 2.27e-263 Identity = 346/363 (95.32%), Postives = 356/363 (98.07%), Query Frame = 0
BLAST of Csor.00g177750 vs. NCBI nr
Match: XP_016903487.1 (PREDICTED: queuine tRNA-ribosyltransferase-like isoform X1 [Cucumis melo] >XP_016903488.1 PREDICTED: queuine tRNA-ribosyltransferase-like isoform X1 [Cucumis melo] >XP_016903489.1 PREDICTED: queuine tRNA-ribosyltransferase-like isoform X1 [Cucumis melo]) HSP 1 Score: 726 bits (1875), Expect = 2.88e-263 Identity = 353/388 (90.98%), Postives = 360/388 (92.78%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy TrEMBL
Match: A0A6J1IMR6 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111476974 PE=3 SV=1) HSP 1 Score: 790 bits (2039), Expect = 3.11e-288 Identity = 387/412 (93.93%), Postives = 387/412 (93.93%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy TrEMBL
Match: A0A6J1F7B3 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111443016 PE=3 SV=1) HSP 1 Score: 790 bits (2039), Expect = 3.11e-288 Identity = 387/412 (93.93%), Postives = 387/412 (93.93%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy TrEMBL
Match: A0A1S4E5I8 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Cucumis melo OX=3656 GN=LOC103503686 PE=3 SV=1) HSP 1 Score: 726 bits (1875), Expect = 1.39e-263 Identity = 353/388 (90.98%), Postives = 360/388 (92.78%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy TrEMBL
Match: A0A0A0LEM5 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_3G889890 PE=3 SV=1) HSP 1 Score: 726 bits (1873), Expect = 4.93e-263 Identity = 353/388 (90.98%), Postives = 359/388 (92.53%), Query Frame = 0
BLAST of Csor.00g177750 vs. ExPASy TrEMBL
Match: A0A6J1DQV0 (Queuine tRNA-ribosyltransferase catalytic subunit 1 OS=Momordica charantia OX=3673 GN=LOC111023258 PE=3 SV=1) HSP 1 Score: 719 bits (1856), Expect = 1.10e-260 Identity = 350/385 (90.91%), Postives = 354/385 (91.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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